Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 157374847

GI number:

Start: 2046645

End: 2048927

Strand: Reverse

Name: Not Available

Synonym: Ssed_1708

Alternate gene names: NA

Gene position: NA

Preceding gene: 157374848

Following gene: 157374846

Centisome position: NA

GC content: NA

Gene sequence:

>2283_bases
ATGACCGAAAAAACTGAACAGTTTGCCAACGCATGGGCAGGTTTCGCTTCTGGCGATTGGAAAACTGAAGTCAACGTTCG
TGACTTTATTCAAGCCAACTACACTCCATATGAGGGTGATGAAGCATTCCTGGCCGAAGCAACTCCAGCGACCACCCAAC
TTTGGGATAAAGTGATGGTTGGGATCAAACAGGAAAACAGCACTCACGCTCCTGTTGATTTCGATACTAAGAAAGTATCA
ACAATTACATCACACGAAGCGGGTTACATCGAGCAAGAGCTTGAAACTATCGTCGGCTTACAAACCGAAGCTCCACTAAA
GCGTGCCATGCTTCCAAATGGCGGCATCCGTATGGTTGAAGGTTCTTGTAAAGCCTACGGCCGTGAACTGGACTCAGATG
TTAAGTACGTCTATTCAGAGCTACGTAAGACTCATAACCAAGGTGTATTCGATATCTACACACCTGAAATCATGCGTTGT
CGTAAGTCTGGTGTCTTAACTGGTTTGCCTGATGCTTATGGCCGTGGTCGTATCATCGGTGATTACCGTCGTATCGCCCT
TTATGGTATCGATTACCTGATGGCCGATAAGTTTGCTCAGTTTGGCTCACTTCAGGCTGGCTTCGAAGCCGGTGAAGACT
TGTCTTCAACTATGCAGCTTCGTGAAGAGATTGCAGAGCAACATCGTGCACTAGGTCAGATGAAGCAGATGGCAGCCAGC
TATGGTTTCGACATCTCTAAGCCTGCAACTAACGCACAAGAAGCGATTCAGTGGACTTACTTCGGTTATTTAGCCGCAGT
TAAGAGCCAAAATGGCGCAGCCATGTCTCTTGGTCGTACTTCAAGTTTCCTCGATGTCTTCATCGAACGTGACCTTAAAA
ATGGCACACTAACTGAAGAACAAGCTCAAGAGATGGTTGACCATTTCGTGATGAAGCTACGTATGGTTCGTTTCCTACGT
ACTCCTGAATACGATGAGTTATTCTCTGGTGATCCAATCTGGGCAACTGAATCTATCGCCGGTATGGGTGTTGACGGACG
TACTCTGGTTACTAAGTCGAGCTTCCGTTTCTTGCACACTCTATACAACATGGGTGCGAGTCCAGAGCCAAACATCACTG
TATTGTGGTCAGAGAAGCTACCATTACCTTTCAAAAAGTACTGTGCAAAGGTCTCTATCGACACTAGCTCAATCCAGTAT
GAAAATGATGATTTGATGCGTCCTGATTTCGCGTCAGATGACTATGCAATCGCATGTTGTGTTAGCCCTATGATTGTAGG
TCAGCACATGCAGTTCTTCGGGGCTCGAGCTAACCTCGCAAAAACGATGCTTTACGCCATCAACGGCGGCTTGGATGAAA
AACTTAAGACTCAGATCGGTCCTAAGTTCGATGCCATCACATCTGAAGTTTTAGACTTTGATGACGTTATGGGTCGCCTC
GACACCATGATGGATTGGTTAGCGACACAATATGTGACTGCGCTTAACTCTATCCACTACATGCACGACAAATACTCTTA
TGAAGCAGCTCTAATGGCACTTCATGACCGTGACGTTCGTCGCACTATGGCGTGTGGTATTGCCGGTCTTTCTATCGCTG
CCGATTCACTTTCTGCAATCAAGTTTGCGAAGGTTAAGCCAATCCGTGATGAGCACGGCATCGCTGTCGATTTCGACATC
GAAGGTGACTATCCTAAGTTTGGTAACAACGACGCACGCGTCGATGACTTAGCTACTGAGCTTGTAGAGCGCTTTATGGC
TAAGATCCGTAGCATGAAGATGTACCGTAACGCGATCCCTACTCAGTCAATTCTTACCATCACTTCTAACGTTGTGTACG
GTAAGAAAACAGGTACGACTCCAGACGGTCGTCCAGCGGGCGCACCATTTGCTCCGGGCGCAAACCCTATGCATGGTCGT
GACGAGAAAGGTGCGGTAGCTTCATTAACTTCTGTTGCTAAACTGCCATTTGCTCACGCTCAGGATGGTATCTCATATAC
TTTCTCTATCGTACCAAATGCGTTAGGTAAAGATGAAGACGGACGTCGCGCTAACTTAGCAGCTCTGATGGACGGTTACT
TCGCTCATAATGACAGCCGCGAAGGTGGTCAACACCTGAACGTTAACGTTATGAACCGTGAAATGCTTGAAGATGCAGTG
GTTAATCCAGATAAATACCCACAGCTTACCATTCGAGTATCAGGCTATGCAGTTCGCTTTAATGCATTGACTCCTGAGCA
GCAGCAAGACGTTATCACTCGTACCTTTACTCAAGGTATGTAA

Upstream 100 bases:

>100_bases
GCTTTTTTAAGACTTAGCTATTGGTATATCGCTACCCTTGCTTTCAAAGCTTAAAGTCGATAACCAATAACCTCTATCTC
AACGAGAAGGTATTTGTACG

Downstream 100 bases:

>100_bases
TCCCGACATCTTTATAGATGAACGGTAGATTATAAGCGTGATGTGGGCTGTACGGTAATTTAGTACAGCCCAATTTATAA
AGAAGGAATCACAATGACAG

Product: formate C-acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>760_residues
MTEKTEQFANAWAGFASGDWKTEVNVRDFIQANYTPYEGDEAFLAEATPATTQLWDKVMVGIKQENSTHAPVDFDTKKVS
TITSHEAGYIEQELETIVGLQTEAPLKRAMLPNGGIRMVEGSCKAYGRELDSDVKYVYSELRKTHNQGVFDIYTPEIMRC
RKSGVLTGLPDAYGRGRIIGDYRRIALYGIDYLMADKFAQFGSLQAGFEAGEDLSSTMQLREEIAEQHRALGQMKQMAAS
YGFDISKPATNAQEAIQWTYFGYLAAVKSQNGAAMSLGRTSSFLDVFIERDLKNGTLTEEQAQEMVDHFVMKLRMVRFLR
TPEYDELFSGDPIWATESIAGMGVDGRTLVTKSSFRFLHTLYNMGASPEPNITVLWSEKLPLPFKKYCAKVSIDTSSIQY
ENDDLMRPDFASDDYAIACCVSPMIVGQHMQFFGARANLAKTMLYAINGGLDEKLKTQIGPKFDAITSEVLDFDDVMGRL
DTMMDWLATQYVTALNSIHYMHDKYSYEAALMALHDRDVRRTMACGIAGLSIAADSLSAIKFAKVKPIRDEHGIAVDFDI
EGDYPKFGNNDARVDDLATELVERFMAKIRSMKMYRNAIPTQSILTITSNVVYGKKTGTTPDGRPAGAPFAPGANPMHGR
DEKGAVASLTSVAKLPFAHAQDGISYTFSIVPNALGKDEDGRRANLAALMDGYFAHNDSREGGQHLNVNVMNREMLEDAV
VNPDKYPQLTIRVSGYAVRFNALTPEQQQDVITRTFTQGM

Sequences:
NA

Specific function: NA

COG id: COG1882

COG function: function code C; Pyruvate-formate lyase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA