Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 157374753

GI number:

Start: 1924798

End: 1928097

Strand: Reverse

Name: Not Available

Synonym: Ssed_1614

Alternate gene names: NA

Gene position: NA

Preceding gene: 157374754

Following gene: 157374752

Centisome position: NA

GC content: NA

Gene sequence:

>3300_bases
ATGAACGAATCAGAAAACACGACTCTGCCTGAAGCAAACATGCCCAATTCAAAATTAGGGATATCGGGTAGAATTGCGGC
GGCTTTTCAGCTCAGTGCCATCACACCACTGCTGGCACTACTTGGTTTACTACTGGGTCTGTTTGCCGTCATAGTAACGC
CAAAAGAGGAAGAGCCTCAGATAGATGTGACATTTGCCGATGTCTTTATTCCCTTCCCCGGTGCGACTCCGGCTCAGGTT
GAAAGCTTAGTCACACTCCCGGCCGAACAGGTGATCTCCGAGATAAAGGGAATAGATACACTCTACTCTTTTTCGCAACC
TGACGGTGCACTTATCATCGCGATTTTTGAAGTTGGGATCCCACGTAACGAAGCGATTGTTAAGCTCTATAATCAGATCT
ACTCGAACCTTGATAAACTCCCATCGGGTGCAGGGGTAGGCGAGCCACTTATCAAGCCTCGTGGAATCGATGATGTCCCC
ATTGTTAGTTTAACGCTATGGTCCAAACAAGCGTCAGTTTCGGCAGAACAGTTGACCCATGTTGCTCACGGACTGGAAAC
AGAGCTGAAGCGTATTCCCGGCACGCGTGAAGTTTCTACCTTAGGCTCACACGAACTCGTGCTTAATGTTCGAATAGATC
CGATGAAGATGAACTATTACGGACTCACCTTTGATGCAATATCTCAGAGCCTTAAGTCAAATAATCATATCTCCATGCCC
GCTTCTCTTATTCAGGGCAATCAGGAGATAAAAGTTCAAGCCGGTCAATTTCTGCAATCGGCTGATGATGTTAAACAACT
CGTCATCTCGGTTTATCAAGACATCGACGGACAAAGCGCCCCCGTCTACCTCAGTGATGTAGCACAGATAACATTGAAAT
CCGATATTCCGGTGAAAAGTGTCTGGTATGGAGATAAAAATGATATCTATCCAGCAGTAACGCTGGCGATAGGAAAGCAA
CCTGGTGAAAATGCCGTCGATATCGCCGATCAGATCTTACAACGTATCGAGCAAGTTCAAAATATTCTGGTTCCCGACAA
CGTAGAGGTTACGGTATCGAGAAACTATGGTGAAACGGCGGGAAATAAAGCCAACACACTTATCTTCAAGTTAATATTTG
CGACATCGGCTGTCGTGCTCTTAGTCTTGTTCACTATGGGCACCAGAGAAGCACTCGTGGTTGGTATCGCGATTATCATT
ACGTTAGCATCGACCCTGTTTGCGTCTTGGGCCTGGGGCTTCACATTAAACAGGATATCCCTATTTGCCCTCATCTTCTC
TATCGGTATTTTGGTCGATGATGCCATCGTAGTGGTCGAAAATATCCACCGTCATATGGCGATGGGCAAACAGTCTTTTA
AAGAGCTGATCCCCGTTGCCGTCGACGAAGTCGGAAGCCCTACCATTTTAGCGACCTTTACCGTTATCGCGGCACTATTA
CCCATGGCCTTTGTCTCTGGGTTAATGGGGCCATATATGGCGCCTATCCCAATCAATGCCAGCATGGGAATGCTTATCTC
CTTAGCCGTCGCGTTCATCGTTACCCCCTGGCTCAGCCGAAAATTACTTAAACAGAATGATCAGCTGAGTCCATCTGCAG
ACACGACTGATGAATCTTCACTTAATGCCACAACTAATGCCTCAACAAAAGAGGAGATGAACGGTGAGCCTGAAAAAAAC
AGCATGATGTTAAGGCTATTTACCAAACTTATTGGCCCCTTCGTTCTGGGCAAACAGGCACGCAGGGCTCGAATTGGGCT
CGCAGGCGCCATATTTGTCTTGATAGGCGTTGCAACGGCATTGCCCTTAAGCAAACTCGTCATACTCAAGATGCTGCCTC
TGGACAACAAATCTGAATTTCAGGTAATGGTGGACATGCCTGAAGGGACGCCGGTAGAACAGACACAACGTGTACTTCAA
GCACTCGGGCGTTATTTGGGCACGGTCGAAGAGGTTGAAAACTATCAACTCTATGCGGGCACCAATGCCCCGATGAATTT
CAATGGGTTAGTCAGACATTACTTCTTGAGAGAGACTCAGGAGCTTGGCGATATTCAAGTCAACCTGCTCGACAAGAAGC
ACAGAGACAGAGACAGCCATACAATCGCACAGTCAATCCGTGCACCGCTGCAAGCGATAGGTAAGCCGTTTAATGCCAAC
ATCAAAGTAGTTGAAGTGCCGCCGGGACCACCGGTCTGGTCACCTATTCTTGCCGAAGTCTACGGACCGAGCGAAGCGAT
CCGTGAAAAAGCGGCCTATCAGTTACAGGCCCTGTTTCATGGGACTGATGATGTCGTAGACATAGATATATTTCTGCCTG
CAGCGCAGCAAAAATGGCAAGTGATCATCGACAGGAGTAAAGCGAGTCTTTCAGGGGTTCCCTATCAAAATATTGTCAGC
CTCATTGCCACCTCTGTCGGCGGTCAGGATATGAGCTACCTGATTAAGGATAAACAGAAACGCCCCACACCAATCCGATT
GCAGTTAAAGGAGTCAGCCAAGCTTGACCTTGAGCAAGTATTAAATCTCAAATTACTTGGCCAAGATGGCAATTCAATCC
CGGTATCTGAACTGGTGAATATCAAAAAGGGCAAGATAGATGCGCCCATTATCCACAAAAACATGATCCCTATGGTGATG
GTGGTTGCCGATATGGCTGGTGAGTTAGATAGTCCCCTGTATGGCATGTTTGAAATGGCGGCCAAGATAGATGCTGAAGA
CGGGCTGGGTTTCGAGCAACACTTTATCAATCAACCTTCGGGCCTCGACGCTATCGCGGTGCTGTGGGATGGCGAATGGA
AAATCACCTACGAAACATTCCGAGATATGGGGATAGCCTACGGCGTTGGTATGATAGCCATCTATCTTCTGGTCGTCGGC
CAGTTCCGCTCCTATACCGTGCCGCTCGTCATCATGGCACCGATCCCGTTAACGGTCATCGGGGTGATGCCTGGACATGC
ACTACTTGGGGCACATTTTACCGCGCCCTCCATGATAGGCATGATTGCGCTGGCCGGGATCATCGTCAGGAACTCCATCT
TGTTGGTGGACTTCATCAACAAGGAAACCGCCGCGGGGGTTCCGTTCGAACAGGCTGTGATTCATTCAGGTGCAGTCAGA
GCCAAACCAATTATGCTGACTGCGCTAGCGGCCATGATTGGTGCCCTGTTTATTATCGATGACCCCATCTTTAACGGGCT
CGCCATCAGTTTAATCTTCGGCATCATGATCTCGACCCTACTGACTCTGGTCGTGATACCGGTTCTCTATTACGCAGTGA
TGAAAAAGCATCACGCCTGA

Upstream 100 bases:

>100_bases
AAAGAGGTCGAAGTCTTGGCGGGGTTGAGCCCCGGAGATGTGATCGCCAGCGACGCGTACCAGGCACTTCAAAACCGTCA
GGCAAAGTAGAGAGGTCAAG

Downstream 100 bases:

>100_bases
TAACTGACACATTAGATAACGAACAACGTATCAATTAACAAAACACGCGGAAATTGGTTCCGCTAAAGGAGATAACAATG
TCTATAGAACGTGCAATCAT

Product: acriflavin resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1099_residues
MNESENTTLPEANMPNSKLGISGRIAAAFQLSAITPLLALLGLLLGLFAVIVTPKEEEPQIDVTFADVFIPFPGATPAQV
ESLVTLPAEQVISEIKGIDTLYSFSQPDGALIIAIFEVGIPRNEAIVKLYNQIYSNLDKLPSGAGVGEPLIKPRGIDDVP
IVSLTLWSKQASVSAEQLTHVAHGLETELKRIPGTREVSTLGSHELVLNVRIDPMKMNYYGLTFDAISQSLKSNNHISMP
ASLIQGNQEIKVQAGQFLQSADDVKQLVISVYQDIDGQSAPVYLSDVAQITLKSDIPVKSVWYGDKNDIYPAVTLAIGKQ
PGENAVDIADQILQRIEQVQNILVPDNVEVTVSRNYGETAGNKANTLIFKLIFATSAVVLLVLFTMGTREALVVGIAIII
TLASTLFASWAWGFTLNRISLFALIFSIGILVDDAIVVVENIHRHMAMGKQSFKELIPVAVDEVGSPTILATFTVIAALL
PMAFVSGLMGPYMAPIPINASMGMLISLAVAFIVTPWLSRKLLKQNDQLSPSADTTDESSLNATTNASTKEEMNGEPEKN
SMMLRLFTKLIGPFVLGKQARRARIGLAGAIFVLIGVATALPLSKLVILKMLPLDNKSEFQVMVDMPEGTPVEQTQRVLQ
ALGRYLGTVEEVENYQLYAGTNAPMNFNGLVRHYFLRETQELGDIQVNLLDKKHRDRDSHTIAQSIRAPLQAIGKPFNAN
IKVVEVPPGPPVWSPILAEVYGPSEAIREKAAYQLQALFHGTDDVVDIDIFLPAAQQKWQVIIDRSKASLSGVPYQNIVS
LIATSVGGQDMSYLIKDKQKRPTPIRLQLKESAKLDLEQVLNLKLLGQDGNSIPVSELVNIKKGKIDAPIIHKNMIPMVM
VVADMAGELDSPLYGMFEMAAKIDAEDGLGFEQHFINQPSGLDAIAVLWDGEWKITYETFRDMGIAYGVGMIAIYLLVVG
QFRSYTVPLVIMAPIPLTVIGVMPGHALLGAHFTAPSMIGMIALAGIIVRNSILLVDFINKETAAGVPFEQAVIHSGAVR
AKPIMLTALAAMIGALFIIDDPIFNGLAISLIFGIMISTLLTLVVIPVLYYAVMKKHHA

Sequences:
NA

Specific function: NA

COG id: COG0841

COG function: function code V; Cation/multidrug efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA