Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157374069

GI number:

Start: 1111500

End: 1113203

Strand: Reverse

Name: Not Available

Synonym: Ssed_0930

Alternate gene names: NA

Gene position: NA

Preceding gene: 157374071

Following gene: 157374068

Centisome position: NA

GC content: NA

Gene sequence:

>1704_bases
ATGAAAAAAGGCAGCTTAACATCGACTATTTTAGGTTTAATGTTAACTTTAATTCTCTTATCGAGCGGGTTAGCAACATT
TTCCATAATCAATTTGTCGTATAGTCTCGGAGATGCGAAAGCCATCAACGCCTCAGGCTCTTTGCGTATGCAAAGCTATC
GCCTGATGTTCTACGCCAATTCAGGCAGTGATGAGGCGGATGAGAAAATTGAGGAGTTTGAAAACACCCTCTACTCAGAT
GCGCTCAAGCGTTCACAAGCCTGGTACAGCTCGAAAGAATCCACCGATCAATACCTGCTGGTTATCGAAAAGTGGAAAGT
GATGAAATATTATATCCAACAGGAAAACTCGCGTCTCTATGCGGCGGCGCTGAAGGATTTCGTCGATACCATAGATCTCT
TGGTTCTGGAGATGGAGCACCACGCCGCATTCAAAATAAAACTCCTGGCAGCCAGTCAGATTTTTGGGCTCGGTTTAATG
CTGTTTATCGCTTTTCTGGCTGTTCGTTTTACCAAGAAAAAAGTCGTGACTCCTCTCCATAAACTGATGGAGTCGGCAAA
CACTATCTCTAAAGGTAACTTCGACATAAAGATGCCACCAACCGACTATGTTGAACTTAGCGCACTGAGTAATGCCTTAG
AGAGCACCGCCAAAGAGCTTTCGACCCTGTATAAAGATCTTGAATCACAGGTAAAAGAGAAAACACATGCGCTAACACGT
GCCAATGACGAGCTCACCCTGCTTTACGATAACCTGGTCATGCTGCACTCGGGCACACTCGATATTGACACCTTAAAACA
AGCGTTGAATCAATTAAGGGCCCATGAACCCCACTCTTTTTTGCGCTTAGTCATCTGTCAGGACGAAGAAGAGAAGCAGG
TCATTGAAGCCGATGGCGGTTGGCCACTCGCGGCGTCAAACCAACTCAATTTCCCCCTGAAATTCGAAGACAATGAACTT
GGCTATCTGGAGGTCATCTCCACTCAACAGCCAAACCATCCTCTGTTTGAGAACTTTGCCATCATGCTCGCGCGATCCAT
AGTGATCTACAGCGCGGGGGAGCAGAAACAACAGCTTGCCTTAATGGAGGAGCGTGGGGTGATTGCAAGGGAGCTGCATG
ATTCGTTAGGCCAACTACTTTCATTTCTTAAGATTCAGGTAAACCTGTTATCTAAGGGGTTAGACAGTGCCTGCAGAAGC
CCTCAAGTTGAGCAGCAGTTATCTGAGATAAACGAAGGAGTGAATACCGCCTATGTGCAGCTCAGAGAGCTACTGTCTAC
ATTCAGATTGACCATCAAAGATCCAAATTTAAGTCATGCTATCGAAGCTATGCTGGAGCAATTGCGTAGCCAATCTGATG
TAAATATTTCACTCGACTACAAATTGCCCCTTCAGCTGTTGGGCGCACATCAACATATTCATGTACTGCAACTAACACGC
GAGGCCACTCTTAACGCTATCAAGCATGCCGATGCAAAACATATTCATATCCGTTGCTTTCTGAGCTCACCGACCGATGT
CACAATCAGTATCAGCGATGACGGGGTGGGTATCGAACAGTTAAGAGAGAGGGACCAACATTTTGGAATAGGCATTATGC
ATGAGCGCGCCAGCCGCTTATCGGGTATAGTAGAGTTCAGCAGTAACCCTGAGGGGGGAACAACGGTCACGCTCACCTTC
CCACCTCAGCAGGAACCATCTTAG

Upstream 100 bases:

>100_bases
CTCACACTTTTACGTATTTGTTAACAAGCTCAAGAGTTAACTAATTTAGATCTCTCATAAAAAGTAGCATAACAACACTA
ATTTAGTGAGTTTTTATATA

Downstream 100 bases:

>100_bases
ATGAAAAATACAATCAAAGCTTTGCTTTGGATTTATAAGACTAATAACGACTCTGATGTTCACACCTCAGCAGGAGGAAG
TATATAAAATGGGTAAGCCA

Product: nitrate/nitrite sensor protein NarQ

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>567_residues
MKKGSLTSTILGLMLTLILLSSGLATFSIINLSYSLGDAKAINASGSLRMQSYRLMFYANSGSDEADEKIEEFENTLYSD
ALKRSQAWYSSKESTDQYLLVIEKWKVMKYYIQQENSRLYAAALKDFVDTIDLLVLEMEHHAAFKIKLLAASQIFGLGLM
LFIAFLAVRFTKKKVVTPLHKLMESANTISKGNFDIKMPPTDYVELSALSNALESTAKELSTLYKDLESQVKEKTHALTR
ANDELTLLYDNLVMLHSGTLDIDTLKQALNQLRAHEPHSFLRLVICQDEEEKQVIEADGGWPLAASNQLNFPLKFEDNEL
GYLEVISTQQPNHPLFENFAIMLARSIVIYSAGEQKQQLALMEERGVIARELHDSLGQLLSFLKIQVNLLSKGLDSACRS
PQVEQQLSEINEGVNTAYVQLRELLSTFRLTIKDPNLSHAIEAMLEQLRSQSDVNISLDYKLPLQLLGAHQHIHVLQLTR
EATLNAIKHADAKHIHIRCFLSSPTDVTISISDDGVGIEQLRERDQHFGIGIMHERASRLSGIVEFSSNPEGGTTVTLTF
PPQQEPS

Sequences:
NA

Specific function: NA

COG id: COG3850

COG function: function code T; Signal transduction histidine kinase, nitrate/nitrite-specific

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA