Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157373993

GI number:

Start: 1017372

End: 1018583

Strand: Reverse

Name: Not Available

Synonym: Ssed_0854

Alternate gene names: NA

Gene position: NA

Preceding gene: 157373994

Following gene: 157373992

Centisome position: NA

GC content: NA

Gene sequence:

>1212_bases
ATGGACTTTACCCAGCTGCGTGCTCAATTCCCTACTCTCGAGCAGACCTTAGAGGGGTATCCACTGTGCTACCTGGACAC
GGCGGCCACCAGCCAGAAGCCCAAGCGAGTCCTGGATGCCATGGTTCAATATTATGAGAAAGATAATGCGAACGTTCACA
GAGCCGCGCATCAACTGTCAAGCAGGGCCACGAGTCAATATGAAGCGGTGCGTGACACTCTTAGGCGCTTCATCAATGCA
GAGCGCCGGGAAGAGGTAATCTTCACTCACGGCACCACCGAAGCTATCAATATGGTGGCCTATGGATTAACGACTCAGAT
TAAAAAGGGCGACCTAATCCTAATCGATACCGCGGCCCATCACGCCAATATCGTCCCTTGGCAGCAGTTGGCCCAGCGTA
CCGGCGCAATTGTCAAACCCATTCCTCTGACTGAAGATTGCCGCTTAGATGAAACAGCCTATGACACCCTGCTGCGAGAC
AAGCCAGCGATTGTCGCACTGAGCCATGTCTCTAACGCCTTGGGGACGCTCAATCCGGTTAGCTCCCTGATAGCTCGCGC
CAAACAAGCCGGCGCGCTCACTTTAGTCGACGGCGCGCAGGCAATTGCTCATCTGGCTGTCGATGTCCGAAGTATCGATT
GTGATTTCTACGTGTTCTCCGCCCATAAAATGTATGGCCCGACGGGGCTTGGCGTGCTTTATGGCCGTTATGAAATATTA
GATACCCTTGCCCCCTTGATAAGCGGCGGTGAGATGATCAAATCCGTCAGCTTCGAGGCAACCGAATTCAACATTCTGCC
GAACAGGCTGGAAGCGGGAACACCGCCGATCGCCGAAGTGATAGGTCTGGGCGAAGCCATTGCCTTTATCGATGAACTGC
CGAGCGTTGAAACAGCCAGGCAGGAAAGTGAGTTAATCTGTTACTTACAATCACAACTCGAGCAGTTAGGCGACATCACC
CTATATGGTGCTCATAAGGATAATATCGGTGCTGTGGCATTTAATCTGGCAGGGGAGCATCATCAGGACGTAGGGATACT
ATTAGATCAACAGGGTATCGCGGTTCGTTGTGGTCATCATTGCGCCATGCCATTGATGCAGAGTCTGCAGATCAAAGGCT
GCTGTCGAGCGTCGGTCGGCGTCTATACCAGCAAAGATGATATCGACAACTTTATCACCGCACTCACATCGGTAAAAGAG
TTGCTGTTATAA

Upstream 100 bases:

>100_bases
AGTGACTCATTAAGAGTCAAACATAAAAGCCACTTGCAATAGGCGTTGAGATCTCCGAAGATCACAACGCCTTTTTTGTT
ATGAACTAGCGGATTAAACC

Downstream 100 bases:

>100_bases
TAAAATTTCAGGTTCCAGGTTCCAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGGTTCTA
GGTTCTAGGTTCTAGGTTCT

Product: aminotransferase, class V

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>403_residues
MDFTQLRAQFPTLEQTLEGYPLCYLDTAATSQKPKRVLDAMVQYYEKDNANVHRAAHQLSSRATSQYEAVRDTLRRFINA
ERREEVIFTHGTTEAINMVAYGLTTQIKKGDLILIDTAAHHANIVPWQQLAQRTGAIVKPIPLTEDCRLDETAYDTLLRD
KPAIVALSHVSNALGTLNPVSSLIARAKQAGALTLVDGAQAIAHLAVDVRSIDCDFYVFSAHKMYGPTGLGVLYGRYEIL
DTLAPLISGGEMIKSVSFEATEFNILPNRLEAGTPPIAEVIGLGEAIAFIDELPSVETARQESELICYLQSQLEQLGDIT
LYGAHKDNIGAVAFNLAGEHHQDVGILLDQQGIAVRCGHHCAMPLMQSLQIKGCCRASVGVYTSKDDIDNFITALTSVKE
LLL

Sequences:
NA

Specific function: NA

COG id: COG0520

COG function: function code E; Selenocysteine lyase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA