Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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The map label for this gene is tolC

Identifier: 157373913

GI number:

Start: 917989

End: 919314

Strand: Reverse

Name: tolC

Synonym: Ssed_0774

Alternate gene names: NA

Gene position: NA

Preceding gene: 157373921

Following gene: 157373909

Centisome position: NA

GC content: NA

Gene sequence:

>1326_bases
ATGAAATTCAAGATCCGAACGATATGTGCAGCTTTAACGCTTGCAGCCACAACGTCAGCCGTACAGGCCGATGATTTATT
GCAGATTTACGAACAAGCGCTTACAAGTGATCCTATCGCCTTACAGGCAAAGGCTCAGCGAGATGCCCTGTACGAACAGA
TTGAAGAAAACCGTGCGCCGTTACTTCCTACCATCAGCGCAAGCGTAGGTTATGGTAAAAGTTGGACTAATGTTTCAGAA
AGCGAATATAACAGCGGCCTGAATGCCGGTGTCACCCTGAACCAGGTGATTTACGACCACAGCGCATGGGTAGGACTAAG
CTTAGCCGAGCTTGCGGCTTCTCAGGCCGATGCCGCTTATGCCTCGGAACTGCAAAAGCTAATCATCCGAGTATCCGGTG
CCTATTTCGACGTTTTATCGGCTAAAGATAACTTCGAATTTAAAGGTTCTGAGAAACGTGCTATCGAACGTCAGCTAGAG
CAGACGAAGCAAAGATTTGCCGTAGGTCTGACTGCCATTACCGATGTACACGAAGCTCAGGCTCAGTTTGACTTGGCTCG
CGCCTCTGAAATTTTATCAGAAAACCAGTTGATCAACAGCTACGAAGCATTGCGTGAAATTACAGGTATCGATCATAAGT
CTATCAATATCTTAGATACCACTCGTTTCACCGCGGTCACCCCAGCTCCAGCACAACCTAACGACTGGTTGAAAATGGCT
GAGACAAACAGTGTCGACCTGATGACCAGACGTATCGGTAAAGATATCGCTCAAGAGACCATCAGCCTCTATAAAGCGGG
TCACATGCCTTCGCTAAGTTTAAATGCGGGCTATACGACTAACCTTGAGCAGAAAGACGAGCTTAAAGATAAAAGCGATT
TTGATAATGCCAATGTCGCTTTGACATTGAGCGTACCGATCTTTGAAGGCTTTAAAGTCACATCAAAAGTCAATCAAGCT
CAGTATCAGTTTGTTGATGCGAGTGAAAAGCTTGAACAGACCTACCGTAAGGTCGTTAAAGATGTCCGCAACAACTTTAA
CAACGTAGGCGCTTCAATCAGCTCGATTAAAGCTTACGAGCAGTCGGTACTCTCTTCAGAGAGCGCCTTGAAGGCGACTC
AAGCAGGTTTCGAGGTCGGTACCCGTACTATTGTTGATGTACTAAACCGAACGCGTGATCTCTATGATTCTAAGCGTCAG
TTATCTGATGCGCGTTACGGTTATATCAACTCGATTCTGGCACTTAAGCAAGCCGCCGGAACCTTGAATGAAGATGACGT
CATCGCGATCAACAACGGCCTGACAGCACAAGCTGTAACGCCATAA

Upstream 100 bases:

>100_bases
CGGGAAGCGCAAACCGCCTTACAGTTTTTGTGAGGTATCACTTAGCTATAAAAGTTAAATGGCTCCTCCAGTGGAGGATT
TTGTCTAAAAAGGACAACTA

Downstream 100 bases:

>100_bases
GTCGATGATTAGACCAGGCTAAAGCTTGGTCTCGGTTTGGGTATAAATACAAAAAAACCGCCACTAATTCAGTTAGTGGC
GGTTTTTTATTACTCAAACA

Product: outer membrane channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>441_residues
MKFKIRTICAALTLAATTSAVQADDLLQIYEQALTSDPIALQAKAQRDALYEQIEENRAPLLPTISASVGYGKSWTNVSE
SEYNSGLNAGVTLNQVIYDHSAWVGLSLAELAASQADAAYASELQKLIIRVSGAYFDVLSAKDNFEFKGSEKRAIERQLE
QTKQRFAVGLTAITDVHEAQAQFDLARASEILSENQLINSYEALREITGIDHKSINILDTTRFTAVTPAPAQPNDWLKMA
ETNSVDLMTRRIGKDIAQETISLYKAGHMPSLSLNAGYTTNLEQKDELKDKSDFDNANVALTLSVPIFEGFKVTSKVNQA
QYQFVDASEKLEQTYRKVVKDVRNNFNNVGASISSIKAYEQSVLSSESALKATQAGFEVGTRTIVDVLNRTRDLYDSKRQ
LSDARYGYINSILALKQAAGTLNEDDVIAINNGLTAQAVTP

Sequences:
NA

Specific function: NA

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA