Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157373674

GI number:

Start: 652346

End: 654574

Strand: Reverse

Name: Not Available

Synonym: Ssed_0534

Alternate gene names: NA

Gene position: NA

Preceding gene: 157373710

Following gene: 157373673

Centisome position: NA

GC content: NA

Gene sequence:

>2229_bases
TTGCTGGTATCCATTGATCAATCTTGTCACCCTATGCCCTTGTTTGTCGAGGTTGCCTTGCCTGTGCCTATGCGGCAAGC
CTTCAGTTATAAAGTACCAGATTCCATTTCAACCCTTCCTAAAAAAGGGATGAGAGTTAAAGTACCCTTTGGTCGTCAGC
AATTAATCGGTTTGGTCACGGGCATTTCCGATACCTGTAACTTAGCACCTCAGCAGATAAAATCTATCTTTGAGCTGTTA
GATGATGAACCACTACTACCTGATTCACTTTATAAACTAACCGCTTGGGCTGCAAGATATTACTTTTGTAGCTTAGGTCA
AATGCTCTCGCAAGCCATCCCGGTCGCTTTGCGTAAGGGAGCAGAGATCTCATCAAACACCACCACTTTCTGGCATCTGA
CCCAGTCTGGCAGATCTGCATCACTCGATACCTTGAAGCGCGCTCCCGCACAGAAAAAAGTCATGGAGCACCTGCTCAAG
GGCGAGCTAACTCAAGATGAAATATCCAGCTTAGCCCTGAGTAAGTCGGCGTTAAAAGCCCTTAATGAGAGAGCGTGGAT
AACCCAGGATGAACGGGTCAACTCTATCGATCTTTCCTGGCGAGAGAAACTCGAGCTCGATGAAGACCCCTTAACGCTAA
ATCCGGAACAAGCCATTGCAGTGGCCACGCTCAACCAACAAACCGGTTATCACTGCACTTTACTCGAAGGTATTACAGGT
TCGGGTAAGACAGAGGTCTACCTGGCCCTGCTGGAGTCGGTTCTCAGCAAGGGGAAACAGGCACTGATCTTAGTACCCGA
GATAGGCTTAACGCCACAAACGATCAGCCGCTTCAAGAGCCGATTCAAGGTGCAGGTCGCCGTTATTCATTCAGGACTAA
CCGATAATCAAAGATTAGCGGCATGGCAACAGGCAAAAACCGGCGAGGCGGCGATCATTATCGGCACACGCTCGGCCCTG
TTTACGCCTATGGCTTTTCCGGGAGTGATAATCCTGGATGAAGAGCATGACTCCAGCTTCAAGCAACAGGAGGGCGTCGG
TTACCATGCCCGGGATCTCGCAGTGATGCGGGGTCATTTAGAAAAAATCCCTGTGCTACTCGGTACGGCGACCCCCTCCC
TCGAAAGCCTGCAAAATGCACTCAGCGGCCGTTACAAACACTTAGAGCTGGGGCAAAGAGCAGGTAATGCTGAGAAAGTG
CGCCAGGGCATCATAGATATCAGCAATCAGCCCCTGAATACCGGGCTTTCCCATGCGCTGCTGAACGAGATGCGTATTCA
TCTCGACGCGGGTAACCAGGTACTCCTGTTTCTGAACCGAAGAGGCTTCGCTCCGGCACTACTCTGTCACGAGTGTGGTC
ACCTCCATGAGTGTGACCGATGTGATGCTTTTTTCACTGTACATCAGTCACTGGGCGAGATCCGTTGCCATCACTGCGGT
AATCATTACGCCATTCCAAAACAGTGCCATAACTGTGGCAGTACCATGTTGATGGGACAAGGCGTTGGCACAGAGCAACT
GGCTAATATTCTGGAGAAAGAGTTCCCGAAATATCCTGTGGTTCGAATCGATCGCGATACCACAAGTAGAAAGGGCGCCC
TCGAAGCACATCTCAACGCTATCCATAAAGGCGAGTATAAGATCCTGGTCGGCACGCAAATGCTGGCAAAAGGGCATCAC
TTCCCCGATGTGACTCTGGTCGGTTTATTAGATGTCGATGGCGCCCTGTTCAGTGCCGACTTCAGGGCACCCGAACGATT
CGGCCAACTTTATACCCAGGTATCGGGCCGTGCGGGAAGAGCCAGAAAACCGGGTACCGTGCTGATGCAAACTCATCAAG
CCGATAACCCTGTATTACGGGAACTAATGCATAAAGGCTATGGCGAATTTGCCCGTGGTCAACTCAATGAACGTAAGCAA
GCCTTGCTGCCACCGGCCTGGCATATGCTGCTTATCCGCGCCGAGGCACATCAGGCCTTAGATGCCGATAACTTTTTATC
CCAAGTCGCCGAACTCTTACCGCAGAACGAGGAGAGTGAAGTCATTGGTCCTATGCCCGCTCCTATGGATAAAAAAGCGG
GTAAATACCGCCGACATCTTATTTTTCAGACCAAGTCGCGCAATCAATTACAGCATGCATTCGAACATGCCTTGCCACAG
ATAGAGTCTCTGCCTTTGGCGAAACGCTGTCGATGGAGCTTAGATAGAGACCCACAAGATCTGCTCTAA

Upstream 100 bases:

>100_bases
TTATCAAGAAAAATGAAAACAGTGCGATTTGAATTATTCTTGCCATTGGATCTCTCCGCCTATAGATAAGAGTAGCCCTT
GACCGACAGGCTGGGTACAC

Downstream 100 bases:

>100_bases
TCGAATGCTTTACCGATTTTTGCAAAGACAATGATGGTCAATTGGTCACTTTTAGGGAAAAAAAAGCATAAAAGTGATTT
CGAAGATAGCAATTGACCAT

Product: primosomal protein N'

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>742_residues
MLVSIDQSCHPMPLFVEVALPVPMRQAFSYKVPDSISTLPKKGMRVKVPFGRQQLIGLVTGISDTCNLAPQQIKSIFELL
DDEPLLPDSLYKLTAWAARYYFCSLGQMLSQAIPVALRKGAEISSNTTTFWHLTQSGRSASLDTLKRAPAQKKVMEHLLK
GELTQDEISSLALSKSALKALNERAWITQDERVNSIDLSWREKLELDEDPLTLNPEQAIAVATLNQQTGYHCTLLEGITG
SGKTEVYLALLESVLSKGKQALILVPEIGLTPQTISRFKSRFKVQVAVIHSGLTDNQRLAAWQQAKTGEAAIIIGTRSAL
FTPMAFPGVIILDEEHDSSFKQQEGVGYHARDLAVMRGHLEKIPVLLGTATPSLESLQNALSGRYKHLELGQRAGNAEKV
RQGIIDISNQPLNTGLSHALLNEMRIHLDAGNQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEIRCHHCG
NHYAIPKQCHNCGSTMLMGQGVGTEQLANILEKEFPKYPVVRIDRDTTSRKGALEAHLNAIHKGEYKILVGTQMLAKGHH
FPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVSGRAGRARKPGTVLMQTHQADNPVLRELMHKGYGEFARGQLNERKQ
ALLPPAWHMLLIRAEAHQALDADNFLSQVAELLPQNEESEVIGPMPAPMDKKAGKYRRHLIFQTKSRNQLQHAFEHALPQ
IESLPLAKRCRWSLDRDPQDLL

Sequences:
NA

Specific function: NA

COG id: COG1198

COG function: function code L; Primosomal protein N' (replication factor Y) - superfamily II helicase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA