Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157373491

GI number:

Start: 405853

End: 408282

Strand: Reverse

Name: Not Available

Synonym: Ssed_0350

Alternate gene names: NA

Gene position: NA

Preceding gene: 157373492

Following gene: 157373490

Centisome position: NA

GC content: NA

Gene sequence:

>2430_bases
ATGGAACGCAGAAGTTTCTTAAAAATGAGTGCCGCACTAAGTTGCGCAGCGACGGTTTCAGGCTGTAACTCAAGCTCTAA
AGATGTTGAAGTGGTACCGCCTACGCCACCTGTTGCCGGTGAAAACCTAAACTGGTCGGCCTGTCTGGTTAACTGTGGCT
CTAACTGCCCGGTACAGGTTTTCTCTACCGATGGGGTGATCACCCGCGTAGAGTCAGAATTTACCACAACAGATAAATAT
GGCGATCATGACGTGCGTGCCTGCCTTCGTGGTCGTTCACTGAGAAAGCGTGTCTATGCTCCCGATCGCCTGAAATACCC
GATGAAGCGTGTCGGCCCTCGCGGCAGTGGACAATTTGAGCGTATCAGCTGGGATGAAGCCCTGGATCTCGTGGCAGAAA
AACTGCAAGGCACCATAGACCAATATGGTAACGAATCGATTCACTTCACCTATAACTCAGGTGCGCGTTATCACTTCTCC
GGTAAGCAGTGTCTCTACCGTCTGATGAACCTTAAGGGTGGTTACCTCAACGCCTATGGCGACTACAGCTGGTCACAAAT
TTATGAGGCTGCGGGACAGACATACGGCTCAGCGGGCCCTGGCTGGCAGGGAAGCAGCGTCTCTGAGATGCAAAACTCAG
ACTTAGTGCTGATGGTAGGTTACAACCCATCTGAGATCCGCATGAGTGGTTCGGGTGAAGCCTATGACTTCCTGATGCAG
AAGCAGAAGAATAAGTTTAAGACTATCTTGATCGACCCACGTTATACCGACTCTGCCGTAGGTAAGGAAGATCAGTGGCT
CGCTATCCGTCCGGGTACCGACGCGGCACTGTTCGAAGCCTTAGCCTATGAGTGGATCACCACCAACACAGTGGATCAGG
CCTTCCTGGACAAATATTGTGTCGGCTATGATGAAAAGACCATGCCTGCGGGCGTTGGATATGAAGAGAGCTATAAGGCG
TATATTCTCGATAACACAACGGTTGGCAGCTCAATTCCAGGCGTTAATGCTAAGACGCCAGAGTGGGCCGCTGCTATCAC
AGGTATCGAAGCCCATATCATCGTCGAGTTAGCCCGTGAACTGGCTGCGGCTCGCGCACCTTTCATCCAGATTGCTGCCT
CACTAAACCGCCAGGCAGCCGGTGAAAACAACACCCGTGCGGGTTACATGCTACCTATCTTGTTAGGCCAGCTGGGTCTG
CCGGGTACTAACTGTGGCGGACTGTGTAAAGGCTCGTTCCTGCACGCACCGTTTATGCCTACCGGTTCTAACCCTGTGAA
GAAAGCTATCTCATTCTTTACCTTCACTCAGGCCATCGAAGACGGTAAGAACATGACCGTTCTGTCCGATGGTGTACAGG
GCGTCGATACCGATGAAGAGGGCGACGGAAAGCTAGGCACAGATATCAAGGCTATCATCAACTATGGTGGTAATGCCCTG
ATTAACCAACACTCAGACGTGCGTAAGACAGAGAAGCTGCTTCAAGATGAATCTAAGTGTGAATTCATTCTTGTCGTCGA
TAACTGGATGACACCGAGTGCCAAGTTTGCCGATGTTTTACTGCCGGATGTGACCTGGTTGGAGTCGGAAGATCTTATCT
ACCAAAGCTACGCAGCCGGTGATACAGCTACCCTGGTACAGATGAGCAGCGGCGTCGATCCTATGTTCGAGAGCCGTCCT
ATCTATGAGGTCTGTGTCGATCTTGCTAAACGTATGGGCGTCGAAGCCGAGTTTACTGAAGGTAAGAGCCGCAAAGACTG
GCTGGATCAGTTCTATGCCGAGTCTAAAGCCGCTACACCGGGACTACCGGATAAAGAGGTGATGCTCACACAAGGTATCT
ATCGCAAGTACCTGCCGGACGGTGGCTATATCGTACTGGAAGATTTCCGTAACGATCCTGAGGCGAATCCTCTGGGCACA
CCATCGGGCAAGATTGAGATCTACTCTTCACGCCTGGCAGACAAAGCCCGCACCTGGAAGCTCAAAGAGGGTGATGTGAT
ATCTGCGCTGCCTAAATATGTGCCTACCTGGGAAGGTTATGAAGATACTGAGACCAAGAAGAAGTATCCACTGCAGCTCA
CCGGTTATCACACTAAAGGCCGCGCACACTCGAGCTATCACAACGTCCCATGGTTACGTGAAGTCGTACAGGATGCCGTA
TGGATGAATCCGCTCGATGCGAACAAGCGCGGACTCAAGACTGGCGACAAGGTCCACATCTTTAACGACCGAGGCACCAT
CGAAGTCGAAGTTAAGGTGACGCCTCGCATCATGGTCGGCGTAACGGCACTGGGTCAGGGCGCGTGGTTCCAACCCGGCG
GCGATGTGGATAAAGGCGGTTGTTTGAACGTCCTGACCACACAACGCACGACACCTGTAACTAAAGGTAATCCTCAGCAC
ACTAACCTGGTTGAAATCCGTAAGGTCTGA

Upstream 100 bases:

>100_bases
CTGAACCATAACTATAACGCGCACCAAGTGATGTTGTCGTTTAGCTACCAGCTGCGCTAATGCAAACAGTGCTAATCATA
ACTGCAATGAGGAAAAGATA

Downstream 100 bases:

>100_bases
TAGGAGATAACAATGAGCAATAATATCCAATACGGCTTTCATGTCGACGCAAGCAAATGTACCGGCTGTAAAACCTGTCA
GGTATCGTGTAAGGATCGTA

Product: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>809_residues
MERRSFLKMSAALSCAATVSGCNSSSKDVEVVPPTPPVAGENLNWSACLVNCGSNCPVQVFSTDGVITRVESEFTTTDKY
GDHDVRACLRGRSLRKRVYAPDRLKYPMKRVGPRGSGQFERISWDEALDLVAEKLQGTIDQYGNESIHFTYNSGARYHFS
GKQCLYRLMNLKGGYLNAYGDYSWSQIYEAAGQTYGSAGPGWQGSSVSEMQNSDLVLMVGYNPSEIRMSGSGEAYDFLMQ
KQKNKFKTILIDPRYTDSAVGKEDQWLAIRPGTDAALFEALAYEWITTNTVDQAFLDKYCVGYDEKTMPAGVGYEESYKA
YILDNTTVGSSIPGVNAKTPEWAAAITGIEAHIIVELARELAAARAPFIQIAASLNRQAAGENNTRAGYMLPILLGQLGL
PGTNCGGLCKGSFLHAPFMPTGSNPVKKAISFFTFTQAIEDGKNMTVLSDGVQGVDTDEEGDGKLGTDIKAIINYGGNAL
INQHSDVRKTEKLLQDESKCEFILVVDNWMTPSAKFADVLLPDVTWLESEDLIYQSYAAGDTATLVQMSSGVDPMFESRP
IYEVCVDLAKRMGVEAEFTEGKSRKDWLDQFYAESKAATPGLPDKEVMLTQGIYRKYLPDGGYIVLEDFRNDPEANPLGT
PSGKIEIYSSRLADKARTWKLKEGDVISALPKYVPTWEGYEDTETKKKYPLQLTGYHTKGRAHSSYHNVPWLREVVQDAV
WMNPLDANKRGLKTGDKVHIFNDRGTIEVEVKVTPRIMVGVTALGQGAWFQPGGDVDKGGCLNVLTTQRTTPVTKGNPQH
TNLVEIRKV

Sequences:
NA

Specific function: NA

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA