| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ravA [H]
Identifier: 157373134
GI number: 157373134
Start: 5440560
End: 5442131
Strand: Direct
Name: ravA [H]
Synonym: Spro_4903
Alternate gene names: 157373134
Gene position: 5440560-5442131 (Clockwise)
Preceding gene: 157373126
Following gene: 157373135
Centisome position: 99.85
GC content: 55.85
Gene sequence:
>1572_bases ATGGTGGTTTATCATCGGATTATCCACCAAGATTGGCTAACCCTCGGACAACACGACAATAATATGGCGTCATCATCACT TCTTGCAGAACGGATTTCCCGCCTCAGCAGCGCGCTGGAGAGCGGTCTTTATGAACGGCAGGAAGCCATTCGCCTGTGTT TGCTGGCGGCGCTCAGCGGTGAAAGCGTGTTTCTGCTTGGCCCACCGGGCATCGCCAAAAGCCTGATTGCCCGTCGGCTA AAATTCGCCTTTCGCAGCGCGCGCTCGTTTGAATACCTGATGACGCGCTTCTCAACGCCGGAAGAAGTGTTCGGCCCATT GTCGATCCAGGCGTTAAAGGACGAAGGCCGCTACCAACGTCTGACCACCGGCTACCTGCCCGAAGCGGAAATCGTGTTTC TGGATGAGATCTGGAAGGCCGGCCCGGCGATCCTCAATACCCTGCTGACGGCGATTAACGAACGCCGCTTCCGTAACGGT AATAACGAAGAACCCATCCCACTGCGGCTGCTGGTCACCGCCTCCAACGAACTGCCGGAAGCCGACAACAGTCTGGAAGC CTTGTATGACCGCATGTTGATACGCCTGTGGTTGGATAAAGTGCAGGACAAACAGAATTTCCGCTCACTGCTGGTCAGCC GCCAGAACGAGAATGAAAACCCGGTGCCCGAAGCACTGAGCATCAGTGACGAGGAATATCACCAGTGGCAATCGCAGATC GACAAAATCAAACTGCCTGAGAATTGCTTTGAACTGATATTCCAACTGCGCCAGCGGCTGGATGCACTGGAAAGTGCCCC TTACGTTTCCGATCGTCGCTGGAAAAAAGCGCTGCGGCTGTTGCAGGCCTGTGCTTTCTTCAGTGGTCGCGACACCGTGG CCCCAATCGATCTGCTGCTGCTGAAAGACTGCCTGTGGCACGACCTCAGCTCGCTGAAACTGCTGCAACAGCAAGTTGAG CAGTTGCTGAACGAGTCGGCCTATCAACAGCAAACCTTGCTGATCCAACTGCAACAGATCCATACCCGCTGGCTACAGCA TCAGCAACAGCAGAGCGACAGCCAGGCTATTACATTGGTAAAAAAGGGCGGCATGTTCAGCAGAAAGCCCCAGTTTGCCC TGGCCACGCCACTCGGTACCGGCACCCTGACCCTGTTGCTGCAAAAACCGCTGCAGCTGCATGATATTCAGGTCAACCAT CTGAGTATTGAAAACATCGCGCTGGAAAACTGGCTGCAAAAAGGCGGCGACGTGCGCGCCAAACTGAACGGCATTGGCTT TGCTCAGCAGATTGACCTGGAAGTGGACGAGCAACTGCATCTGACGGTACTGGACGTCAGCCGCCAGCCCTCTTTACTGG CCCAGCCCGGCAAGCAGACCAGCGGCACGCCGCAGGCAATGCTGGACGAAATGGATCAGCTTGCACAGCGCCTGGCAGAA CAGCGTCGGTTATTCAGTCAGCATCAGCCCTGCCTGTTTACCCCTGCCGCCAGGCTGGCAAAAATTGAGTCCAGCCTGCT GCAGGTGGCGGAACAAATCAAACAGCAGCACCAGCAAATGCGCGGCCAGTAA
Upstream 100 bases:
>100_bases TATCCTTATATCAGAGCTTAAAAATAAACAAAATGTGAACCAGCCACCCTTTTGATAATAGAAAGATTTTACTAATCAAC AAGCTATACCATTAAAAATA
Downstream 100 bases:
>100_bases TTATGCTCAGCCTGGAAACACTCGATCTGCTGCTGGCGATCACCGAAGGTGAACTGATCGAGGAGATGATCATCGGCATG CTGGCGGCACCGCAGCTGTC
Product: regulatory ATPase RavA
Products: NA
Alternate protein names: Regulatory ATPase variant A [H]
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MVVYHRIIHQDWLTLGQHDNNMASSSLLAERISRLSSALESGLYERQEAIRLCLLAALSGESVFLLGPPGIAKSLIARRL KFAFRSARSFEYLMTRFSTPEEVFGPLSIQALKDEGRYQRLTTGYLPEAEIVFLDEIWKAGPAILNTLLTAINERRFRNG NNEEPIPLRLLVTASNELPEADNSLEALYDRMLIRLWLDKVQDKQNFRSLLVSRQNENENPVPEALSISDEEYHQWQSQI DKIKLPENCFELIFQLRQRLDALESAPYVSDRRWKKALRLLQACAFFSGRDTVAPIDLLLLKDCLWHDLSSLKLLQQQVE QLLNESAYQQQTLLIQLQQIHTRWLQHQQQQSDSQAITLVKKGGMFSRKPQFALATPLGTGTLTLLLQKPLQLHDIQVNH LSIENIALENWLQKGGDVRAKLNGIGFAQQIDLEVDEQLHLTVLDVSRQPSLLAQPGKQTSGTPQAMLDEMDQLAQRLAE QRRLFSQHQPCLFTPAARLAKIESSLLQVAEQIKQQHQQMRGQ
Sequences:
>Translated_523_residues MVVYHRIIHQDWLTLGQHDNNMASSSLLAERISRLSSALESGLYERQEAIRLCLLAALSGESVFLLGPPGIAKSLIARRL KFAFRSARSFEYLMTRFSTPEEVFGPLSIQALKDEGRYQRLTTGYLPEAEIVFLDEIWKAGPAILNTLLTAINERRFRNG NNEEPIPLRLLVTASNELPEADNSLEALYDRMLIRLWLDKVQDKQNFRSLLVSRQNENENPVPEALSISDEEYHQWQSQI DKIKLPENCFELIFQLRQRLDALESAPYVSDRRWKKALRLLQACAFFSGRDTVAPIDLLLLKDCLWHDLSSLKLLQQQVE QLLNESAYQQQTLLIQLQQIHTRWLQHQQQQSDSQAITLVKKGGMFSRKPQFALATPLGTGTLTLLLQKPLQLHDIQVNH LSIENIALENWLQKGGDVRAKLNGIGFAQQIDLEVDEQLHLTVLDVSRQPSLLAQPGKQTSGTPQAMLDEMDQLAQRLAE QRRLFSQHQPCLFTPAARLAKIESSLLQVAEQIKQQHQQMRGQ >Mature_523_residues MVVYHRIIHQDWLTLGQHDNNMASSSLLAERISRLSSALESGLYERQEAIRLCLLAALSGESVFLLGPPGIAKSLIARRL KFAFRSARSFEYLMTRFSTPEEVFGPLSIQALKDEGRYQRLTTGYLPEAEIVFLDEIWKAGPAILNTLLTAINERRFRNG NNEEPIPLRLLVTASNELPEADNSLEALYDRMLIRLWLDKVQDKQNFRSLLVSRQNENENPVPEALSISDEEYHQWQSQI DKIKLPENCFELIFQLRQRLDALESAPYVSDRRWKKALRLLQACAFFSGRDTVAPIDLLLLKDCLWHDLSSLKLLQQQVE QLLNESAYQQQTLLIQLQQIHTRWLQHQQQQSDSQAITLVKKGGMFSRKPQFALATPLGTGTLTLLLQKPLQLHDIQVNH LSIENIALENWLQKGGDVRAKLNGIGFAQQIDLEVDEQLHLTVLDVSRQPSLLAQPGKQTSGTPQAMLDEMDQLAQRLAE QRRLFSQHQPCLFTPAARLAKIESSLLQVAEQIKQQHQQMRGQ
Specific function: Functions as an ATPase. May play a role in metal insertion (metal-chelatase) or as a chaperone [H]
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ravA family [H]
Homologues:
Organism=Escherichia coli, GI87082326, Length=497, Percent_Identity=68.41046277666, Blast_Score=676, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 - InterPro: IPR022547 [H]
Pfam domain/function: PF07728 AAA_5; PF12592 DUF3763 [H]
EC number: NA
Molecular weight: Translated: 59755; Mature: 59755
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVYHRIIHQDWLTLGQHDNNMASSSLLAERISRLSSALESGLYERQEAIRLCLLAALSG CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ESVFLLGPPGIAKSLIARRLKFAFRSARSFEYLMTRFSTPEEVFGPLSIQALKDEGRYQR CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHEEHHCCCCHHH LTTGYLPEAEIVFLDEIWKAGPAILNTLLTAINERRFRNGNNEEPIPLRLLVTASNELPE HHCCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCC ADNSLEALYDRMLIRLWLDKVQDKQNFRSLLVSRQNENENPVPEALSISDEEYHQWQSQI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHH DKIKLPENCFELIFQLRQRLDALESAPYVSDRRWKKALRLLQACAFFSGRDTVAPIDLLL HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LKDCLWHDLSSLKLLQQQVEQLLNESAYQQQTLLIQLQQIHTRWLQHQQQQSDSQAITLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEE KKGGMFSRKPQFALATPLGTGTLTLLLQKPLQLHDIQVNHLSIENIALENWLQKGGDVRA ECCCCCCCCCCCEEECCCCCHHHHHHHHCCCHHHCEEEEEEEHHHHHHHHHHHCCCCEEE KLNGIGFAQQIDLEVDEQLHLTVLDVSRQPSLLAQPGKQTSGTPQAMLDEMDQLAQRLAE EECCCCCHHEECCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHH QRRLFSQHQPCLFTPAARLAKIESSLLQVAEQIKQQHQQMRGQ HHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVVYHRIIHQDWLTLGQHDNNMASSSLLAERISRLSSALESGLYERQEAIRLCLLAALSG CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ESVFLLGPPGIAKSLIARRLKFAFRSARSFEYLMTRFSTPEEVFGPLSIQALKDEGRYQR CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHEEHHCCCCHHH LTTGYLPEAEIVFLDEIWKAGPAILNTLLTAINERRFRNGNNEEPIPLRLLVTASNELPE HHCCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCC ADNSLEALYDRMLIRLWLDKVQDKQNFRSLLVSRQNENENPVPEALSISDEEYHQWQSQI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHH DKIKLPENCFELIFQLRQRLDALESAPYVSDRRWKKALRLLQACAFFSGRDTVAPIDLLL HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LKDCLWHDLSSLKLLQQQVEQLLNESAYQQQTLLIQLQQIHTRWLQHQQQQSDSQAITLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEE KKGGMFSRKPQFALATPLGTGTLTLLLQKPLQLHDIQVNHLSIENIALENWLQKGGDVRA ECCCCCCCCCCCEEECCCCCHHHHHHHHCCCHHHCEEEEEEEHHHHHHHHHHHCCCCEEE KLNGIGFAQQIDLEVDEQLHLTVLDVSRQPSLLAQPGKQTSGTPQAMLDEMDQLAQRLAE EECCCCCHHEECCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHH QRRLFSQHQPCLFTPAARLAKIESSLLQVAEQIKQQHQQMRGQ HHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA