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The map label for this gene is yieP [H]

Identifier: 157373125

GI number: 157373125

Start: 5430299

End: 5430988

Strand: Direct

Name: yieP [H]

Synonym: Spro_4894

Alternate gene names: 157373125

Gene position: 5430299-5430988 (Clockwise)

Preceding gene: 157373124

Following gene: 157373126

Centisome position: 99.66

GC content: 54.64

Gene sequence:

>690_bases
ATGCAATTTAATGCTCAACAACAGGCCGCCCAACGCAATCTTTCTTATCTACTTGCAGAAAAACTCGGCCAACAAATTCT
GGCAGGCGATTATCAGGCCGGCAGCATCCTGCCCGGAGAGATGGAACTGGGCGAACAATTCGGCGTTAGCCGCACGGCGG
TACGCGAAGCGGTGAAGATGCTGGCAGCCAAAGGCATGTTATTGCCCCGACCACGCATTGGGACCCGGGTGATGCCGCAA
AGCCAGTGGAACTTTCTCGATCAGGATTTGCTGACCTGGTGGATGACCAAGGAAAACTTCGATCAGGTCATGCAGCACTT
CCTTATATTGCGCACCTCTCTGGAACCTCAGGCCTGCTCGCTGGCGGCGGCCAATGCCAGCCATCAGCAAACCGCACGAC
TGGCTGAACTGATGGCGGAAATGCGCGCCCTGCATATCCAGTTCGACCGAGAGCACTGGATCCAGGTGGATACCCAATTC
CACCAGCTCATCTATGAAGCCAGCGGCAACCCATTTCTGACCTCATTTGCCAATCTGTTCAGTTCGGTATATCAAAGTTA
CTTCCGCGCCATCACCGGCAACGAAGTGATTAAGCTCCAGCACCACCAGGCCATCGTCGATGCGATACTCGCCGGTGACA
GCGCGGAGGCATTAACCGCCTGCCAGGTTTTGCTTAGAGAGAAAGACTAA

Upstream 100 bases:

>100_bases
CAAGTCAGCGTTTTCGTCACTTTTTCCGGTAAACAGCCACAAAAGCTGGCGATCCGTAGAGTAAAATAAGAGTAACAATG
TCAGTTAAGGACTCGCAGCC

Downstream 100 bases:

>100_bases
CGCCCCCTACTTATATAGAAGAAGATGAAAGGGACGAAGACGACAGTTAACCGGGACTCACAATGACCAAATCCGCGCGC
AGTATGGCAGGACTACCCTG

Product: GntR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MQFNAQQQAAQRNLSYLLAEKLGQQILAGDYQAGSILPGEMELGEQFGVSRTAVREAVKMLAAKGMLLPRPRIGTRVMPQ
SQWNFLDQDLLTWWMTKENFDQVMQHFLILRTSLEPQACSLAAANASHQQTARLAELMAEMRALHIQFDREHWIQVDTQF
HQLIYEASGNPFLTSFANLFSSVYQSYFRAITGNEVIKLQHHQAIVDAILAGDSAEALTACQVLLREKD

Sequences:

>Translated_229_residues
MQFNAQQQAAQRNLSYLLAEKLGQQILAGDYQAGSILPGEMELGEQFGVSRTAVREAVKMLAAKGMLLPRPRIGTRVMPQ
SQWNFLDQDLLTWWMTKENFDQVMQHFLILRTSLEPQACSLAAANASHQQTARLAELMAEMRALHIQFDREHWIQVDTQF
HQLIYEASGNPFLTSFANLFSSVYQSYFRAITGNEVIKLQHHQAIVDAILAGDSAEALTACQVLLREKD
>Mature_229_residues
MQFNAQQQAAQRNLSYLLAEKLGQQILAGDYQAGSILPGEMELGEQFGVSRTAVREAVKMLAAKGMLLPRPRIGTRVMPQ
SQWNFLDQDLLTWWMTKENFDQVMQHFLILRTSLEPQACSLAAANASHQQTARLAELMAEMRALHIQFDREHWIQVDTQF
HQLIYEASGNPFLTSFANLFSSVYQSYFRAITGNEVIKLQHHQAIVDAILAGDSAEALTACQVLLREKD

Specific function: Unknown

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=229, Percent_Identity=67.6855895196507, Blast_Score=323, Evalue=5e-90,
Organism=Escherichia coli, GI48994955, Length=206, Percent_Identity=34.4660194174757, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1789621, Length=227, Percent_Identity=27.7533039647577, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1786303, Length=218, Percent_Identity=29.3577981651376, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25896; Mature: 25896

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFNAQQQAAQRNLSYLLAEKLGQQILAGDYQAGSILPGEMELGEQFGVSRTAVREAVKM
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
LAAKGMLLPRPRIGTRVMPQSQWNFLDQDLLTWWMTKENFDQVMQHFLILRTSLEPQACS
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHH
LAAANASHQQTARLAELMAEMRALHIQFDREHWIQVDTQFHQLIYEASGNPFLTSFANLF
HHHCCCCHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SSVYQSYFRAITGNEVIKLQHHQAIVDAILAGDSAEALTACQVLLREKD
HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQFNAQQQAAQRNLSYLLAEKLGQQILAGDYQAGSILPGEMELGEQFGVSRTAVREAVKM
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
LAAKGMLLPRPRIGTRVMPQSQWNFLDQDLLTWWMTKENFDQVMQHFLILRTSLEPQACS
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHH
LAAANASHQQTARLAELMAEMRALHIQFDREHWIQVDTQFHQLIYEASGNPFLTSFANLF
HHHCCCCHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SSVYQSYFRAITGNEVIKLQHHQAIVDAILAGDSAEALTACQVLLREKD
HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]