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The map label for this gene is slmA [H]

Identifier: 157373077

GI number: 157373077

Start: 5363801

End: 5364397

Strand: Direct

Name: slmA [H]

Synonym: Spro_4845

Alternate gene names: 157373077

Gene position: 5363801-5364397 (Clockwise)

Preceding gene: 157373076

Following gene: 157373080

Centisome position: 98.44

GC content: 54.44

Gene sequence:

>597_bases
ATGGCAGAAAAAGAAAAAATCAAAAGGAACCGGCGCGAAGAAATACTGCAGGCGTTAGCCCAAATGCTGGAATCCAGCGA
CGGCAGCCAGCGTATTACCACCGCTAAGCTTGCCGCTAACGTCGGAGTCTCCGAAGCTGCACTGTACCGGCACTTCCCCA
GTAAGACACGGATGTTCGACAGTCTGATCGAGTTCATTGAAGACAGCCTGATCACGCGCATCAACCTGATCCTGCAGGAT
GAGAAAGAAACCTTTAACCGCCTGCGTTTGATTCTGCTACTGGTGCTGGGGTTTGCCGAACGCAACCCGGGCCTGACACG
TATCATGACCGGTCACGCACTAATGTTTGAGCAGGATCGGCTACAGGGGCGAATCAACCAGCTGTTTGAACGCATCGAGG
CGCAGCTGCGCCAGGTGTTGAAAGAACGCAAACTGCGGGAAGGCAAAGGCTTTATCGTGGATGAAACGCTGCTGGCCAGC
CAGTTACTGGCGTTTTGTGAAGGCATGCTGTCACGCTATGTGCGCTCCGAATTCCGCTACCGCCCAACGCAAGAATTCGA
TGGCCGCTGGCCACTGTTGGCGGCACAACTGCAATAG

Upstream 100 bases:

>100_bases
AAAAAAAGCCATCACATAAGCCGCACAGAGATAATCTCTGCAGCGGCCGATGCCCGGGTTTTCGAAAGTCTAAGCAGTTT
TAGCAAGGGTCTAATCAGAC

Downstream 100 bases:

>100_bases
ACCCTATGCCGGGCGCGTTTGGTTGCGCCCGGCATAGTAGACTCCGCGTTAAACCCCGTACTGCTCGCGATAAGCACGAA
CTGCCGCCAGGTGATCCGCC

Product: nucleoid occlusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MAEKEKIKRNRREEILQALAQMLESSDGSQRITTAKLAANVGVSEAALYRHFPSKTRMFDSLIEFIEDSLITRINLILQD
EKETFNRLRLILLLVLGFAERNPGLTRIMTGHALMFEQDRLQGRINQLFERIEAQLRQVLKERKLREGKGFIVDETLLAS
QLLAFCEGMLSRYVRSEFRYRPTQEFDGRWPLLAAQLQ

Sequences:

>Translated_198_residues
MAEKEKIKRNRREEILQALAQMLESSDGSQRITTAKLAANVGVSEAALYRHFPSKTRMFDSLIEFIEDSLITRINLILQD
EKETFNRLRLILLLVLGFAERNPGLTRIMTGHALMFEQDRLQGRINQLFERIEAQLRQVLKERKLREGKGFIVDETLLAS
QLLAFCEGMLSRYVRSEFRYRPTQEFDGRWPLLAAQLQ
>Mature_197_residues
AEKEKIKRNRREEILQALAQMLESSDGSQRITTAKLAANVGVSEAALYRHFPSKTRMFDSLIEFIEDSLITRINLILQDE
KETFNRLRLILLLVLGFAERNPGLTRIMTGHALMFEQDRLQGRINQLFERIEAQLRQVLKERKLREGKGFIVDETLLASQ
LLAFCEGMLSRYVRSEFRYRPTQEFDGRWPLLAAQLQ

Specific function: Required for nucleoid occlusion (NO) phenomenon, which cooperates in the proper positioning of the ftsZ/septal ring at midcell during cell division. Acts as a DNA-associated division inhibitor directly involved in preventing Z ring assembly on portions of

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082302, Length=198, Percent_Identity=85.3535353535353, Blast_Score=333, Evalue=4e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23072; Mature: 22941

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKEKIKRNRREEILQALAQMLESSDGSQRITTAKLAANVGVSEAALYRHFPSKTRMFD
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH
SLIEFIEDSLITRINLILQDEKETFNRLRLILLLVLGFAERNPGLTRIMTGHALMFEQDR
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHH
LQGRINQLFERIEAQLRQVLKERKLREGKGFIVDETLLASQLLAFCEGMLSRYVRSEFRY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RPTQEFDGRWPLLAAQLQ
CCCCCCCCCCCHHHCCCC
>Mature Secondary Structure 
AEKEKIKRNRREEILQALAQMLESSDGSQRITTAKLAANVGVSEAALYRHFPSKTRMFD
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH
SLIEFIEDSLITRINLILQDEKETFNRLRLILLLVLGFAERNPGLTRIMTGHALMFEQDR
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHH
LQGRINQLFERIEAQLRQVLKERKLREGKGFIVDETLLASQLLAFCEGMLSRYVRSEFRY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RPTQEFDGRWPLLAAQLQ
CCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA