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The map label for this gene is rfaB [C]

Identifier: 157373066

GI number: 157373066

Start: 5354651

End: 5355748

Strand: Direct

Name: rfaB [C]

Synonym: Spro_4834

Alternate gene names: 157373066

Gene position: 5354651-5355748 (Clockwise)

Preceding gene: 157373065

Following gene: 157373068

Centisome position: 98.27

GC content: 55.19

Gene sequence:

>1098_bases
ATGCGTATTCTGATGATTATCGACGGCCTGCCTGGCGGAGGCGCCGAAAAAGTGGTGCTGACCCTGTGCCAGGGAATGCA
GCAAATGGGTCATGACGTCAGCCTGATTTCATTGCGCGACGTCTGTAACTATCCAATTCCCGCCGGCATTCACTATCAGG
TGGTCGCGGACCATAGCCGCTCACCATGGCGCAAACTGACCGAACTGTCGCGCCGCGCCGCCGCATTGGATCGGGCGATC
GCCGACAATGAGCGCCAACAGGGTGCCTATGACTTGGTGTTCTCCAACCTGCATAAAACCGATCGCATCGTCAGCCGCAG
CAAGTTGCTCACGTCAGACCGCCTGTGGTTCTGCATTCACGGTATCCTGTCGACCTCCTATCTGGGCCATCGCAAGGGGC
TGGATCGTTGGCTGAAACAACGGAAAATCACCCAAGTTTACCAGGGCAGAAATATCGTTGCCGTCTCACAAGCCGTGGGC
AACGACTTGCAGCAGAACTTGCCGATCCGCCCAAACCGATTGGCGGTGATCAATAATCCGTTTGATATTGCCGCCATCGA
GCAGCAGGCGGCGGAACCCTGTGAGCTGGCAGGCAAAGATTATCTGGTACACGTCGGACGGTTTCATCCGCACAAACGGC
ACGATCGGCTGTTGAAGGCCTATGCCCAATCGGGCATACAAGCCCCGCTGGCGCTGATCGGCACCGGCAGCGAAGCCAGC
GTAGGGGAAGTGAAACAACTGGCAAACCAGTTGGGTATCGCAGACCGAGTACTGTTCCTCGGCTTTCAGGCCAATCCTTA
TCCGTTTATTCGGCACGCATCACTGCTGGTACTAAGCTCCGACAGCGAAGGCTTTGGTAACGTGCTGGTGGAAGCGCTAC
TCTGTGGTACTCCGGTGGTCAGCACCCGTTGCCCCGGCGGGCCTGCGGAAATTCTGGAAAAAGCGGGAATGGATAACGCA
CTGGCGGAACTTAATGAAAAATCACTGGCGGAGAAAATGGCAGACATTTATGCCAACCCACCAGAGATTAATTACCAACA
ACTGTTGAGCTATGGACTAGAGCCTATTTGTCAGCAATACCTGGCACTCAAGAAATAA

Upstream 100 bases:

>100_bases
CCGCCATGGGTGAGGCAGCAAGAGCGCGTATCATGTCGGCTACCCCGGCGCGCCTGTCGGAACAGCTGATCTCCCTTTAT
AACCGGCTGCTGGATTAACT

Downstream 100 bases:

>100_bases
ATAAGGCAGGGGATCCCTGCCTTATAGTTAATTAATTTAGCGCCTGTATTTTTTGCCAGACGTCTTCCACAGGAACATCA
ATACAGTCGCCCGATTCGGT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MRILMIIDGLPGGGAEKVVLTLCQGMQQMGHDVSLISLRDVCNYPIPAGIHYQVVADHSRSPWRKLTELSRRAAALDRAI
ADNERQQGAYDLVFSNLHKTDRIVSRSKLLTSDRLWFCIHGILSTSYLGHRKGLDRWLKQRKITQVYQGRNIVAVSQAVG
NDLQQNLPIRPNRLAVINNPFDIAAIEQQAAEPCELAGKDYLVHVGRFHPHKRHDRLLKAYAQSGIQAPLALIGTGSEAS
VGEVKQLANQLGIADRVLFLGFQANPYPFIRHASLLVLSSDSEGFGNVLVEALLCGTPVVSTRCPGGPAEILEKAGMDNA
LAELNEKSLAEKMADIYANPPEINYQQLLSYGLEPICQQYLALKK

Sequences:

>Translated_365_residues
MRILMIIDGLPGGGAEKVVLTLCQGMQQMGHDVSLISLRDVCNYPIPAGIHYQVVADHSRSPWRKLTELSRRAAALDRAI
ADNERQQGAYDLVFSNLHKTDRIVSRSKLLTSDRLWFCIHGILSTSYLGHRKGLDRWLKQRKITQVYQGRNIVAVSQAVG
NDLQQNLPIRPNRLAVINNPFDIAAIEQQAAEPCELAGKDYLVHVGRFHPHKRHDRLLKAYAQSGIQAPLALIGTGSEAS
VGEVKQLANQLGIADRVLFLGFQANPYPFIRHASLLVLSSDSEGFGNVLVEALLCGTPVVSTRCPGGPAEILEKAGMDNA
LAELNEKSLAEKMADIYANPPEINYQQLLSYGLEPICQQYLALKK
>Mature_365_residues
MRILMIIDGLPGGGAEKVVLTLCQGMQQMGHDVSLISLRDVCNYPIPAGIHYQVVADHSRSPWRKLTELSRRAAALDRAI
ADNERQQGAYDLVFSNLHKTDRIVSRSKLLTSDRLWFCIHGILSTSYLGHRKGLDRWLKQRKITQVYQGRNIVAVSQAVG
NDLQQNLPIRPNRLAVINNPFDIAAIEQQAAEPCELAGKDYLVHVGRFHPHKRHDRLLKAYAQSGIQAPLALIGTGSEAS
VGEVKQLANQLGIADRVLFLGFQANPYPFIRHASLLVLSSDSEGFGNVLVEALLCGTPVVSTRCPGGPAEILEKAGMDNA
LAELNEKSLAEKMADIYANPPEINYQQLLSYGLEPICQQYLALKK

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=165, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 40273; Mature: 40273

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILMIIDGLPGGGAEKVVLTLCQGMQQMGHDVSLISLRDVCNYPIPAGIHYQVVADHSR
CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCEEEEEECCCC
SPWRKLTELSRRAAALDRAIADNERQQGAYDLVFSNLHKTDRIVSRSKLLTSDRLWFCIH
CHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GILSTSYLGHRKGLDRWLKQRKITQVYQGRNIVAVSQAVGNDLQQNLPIRPNRLAVINNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCHHHHCCCCCCCCEEEECCC
FDIAAIEQQAAEPCELAGKDYLVHVGRFHPHKRHDRLLKAYAQSGIQAPLALIGTGSEAS
CCHHHHHHHCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCC
VGEVKQLANQLGIADRVLFLGFQANPYPFIRHASLLVLSSDSEGFGNVLVEALLCGTPVV
HHHHHHHHHHHCHHHHHHEEECCCCCCCHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCC
STRCPGGPAEILEKAGMDNALAELNEKSLAEKMADIYANPPEINYQQLLSYGLEPICQQY
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHH
LALKK
HHCCC
>Mature Secondary Structure
MRILMIIDGLPGGGAEKVVLTLCQGMQQMGHDVSLISLRDVCNYPIPAGIHYQVVADHSR
CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCEEEEEECCCC
SPWRKLTELSRRAAALDRAIADNERQQGAYDLVFSNLHKTDRIVSRSKLLTSDRLWFCIH
CHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GILSTSYLGHRKGLDRWLKQRKITQVYQGRNIVAVSQAVGNDLQQNLPIRPNRLAVINNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCHHHHCCCCCCCCEEEECCC
FDIAAIEQQAAEPCELAGKDYLVHVGRFHPHKRHDRLLKAYAQSGIQAPLALIGTGSEAS
CCHHHHHHHCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCC
VGEVKQLANQLGIADRVLFLGFQANPYPFIRHASLLVLSSDSEGFGNVLVEALLCGTPVV
HHHHHHHHHHHCHHHHHHEEECCCCCCCHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCC
STRCPGGPAEILEKAGMDNALAELNEKSLAEKMADIYANPPEINYQQLLSYGLEPICQQY
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHH
LALKK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]