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The map label for this gene is rfaQ [H]

Identifier: 157373064

GI number: 157373064

Start: 5352442

End: 5353524

Strand: Direct

Name: rfaQ [H]

Synonym: Spro_4832

Alternate gene names: 157373064

Gene position: 5352442-5353524 (Clockwise)

Preceding gene: 157373061

Following gene: 157373065

Centisome position: 98.23

GC content: 56.05

Gene sequence:

>1083_bases
ATGATGAACGACGCGCCAGCCCTTGCTCCTGATACCTCGATACAGCGTATTCTGATCGTTAAACTTCGCCACCACGGCGA
CATGTTGCTGATCACACCGGTCATCAATACCCTGCGGCAAAATTACCCGCAGGCGCAGATCGACGTACTGCTGTATAAAG
AAACCCAGGAGATGCTGGCCAGCCACCCGGCTCTGACAAACGTCTTCGCTATCGATCGCCAGTGGAAAAAACAGGGCACT
AAAGCGCATCTGCGCCATGAACTTAACCTGATTCGGCAGCTCAAGGCCCAAAGTTACGATCTGGTGGTCAATCTGGCCGA
TCAGTGGCGCAGCGCCCTGCTCTCCAGGTTGACCGGCGCGCGTATTCGTCTGGGGTTCGATTTTCCCAAACGTCAGGGCT
TCTTATGGCGCCATTGTCATACCCATTTGGTACCGGTGAGCGATCACGCCCGGTTGCATACGGTTGAACAGAACCTGTCA
CTGTTAGAACCACTCAACCTGCCAAATATTAGCCAACAGGTGACCATGAGCTACCCGCCGCAGGACTGGCAGACCTGCGA
ACAGTTGTTGCAGCAACAGGGCATTAGCGGTGATTTTATTGTGGTGCAGCCCACTTCCCGCTGGTTCTTCAAATGCTGGA
GCGAAGAAAAAATGGCGGCTACTATCAGCGCGTTACAGGCCGATGGTCACCAATTGGTGGTCACCTCCGGGCCGGACGCA
AAAGAACGTGAAATGGTGGAGCGCATCTTGGCACTCTGCCCGCCACAGGGCGTAATTTCTCTGGCAGGTCAACTGACGTT
GAGGCAACTGGCCGCCCTGATCGACCACGCTAAACTGTTTATCGGCGTAGATTCGGTGCCTATGCACATGGCCGCGGCGC
TGCAGACCCCCTGCATCGCACTGTTTGGCCCTTCCAAACTGGTGTTCTGGCGCCCCTGGCAGGTCATTGGCAACGTGATA
TGGGCCGGAGACTACGGCGACTTACCCGATCCGGACGCCATCGATACCGGCACCGATGAACGTTATCTGGACCTTATTCC
TACAGACGCGGTGATTGCAGCCGCGCGGAGCCAGCTTGCATGA

Upstream 100 bases:

>100_bases
CCAGGCTATTTTTTCGCTTCACGGCAAGAAAACCGAGCAACAGTAGCCACATGCGATCGGGTCATTTAGAATCAAAGATT
GGTTTCCCTGAAAGCGACTC

Downstream 100 bases:

>100_bases
AAGCATTTCGTTTGGCGATCGTTCGCCAAAAATACCGCCCGGACGGTGGCGCTGAGCGTTTCGTTTCCCGCGCCCTTGAG
GCGCTGGAACAACAGGACCT

Product: lipopolysaccharide heptosyltransferase III

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MMNDAPALAPDTSIQRILIVKLRHHGDMLLITPVINTLRQNYPQAQIDVLLYKETQEMLASHPALTNVFAIDRQWKKQGT
KAHLRHELNLIRQLKAQSYDLVVNLADQWRSALLSRLTGARIRLGFDFPKRQGFLWRHCHTHLVPVSDHARLHTVEQNLS
LLEPLNLPNISQQVTMSYPPQDWQTCEQLLQQQGISGDFIVVQPTSRWFFKCWSEEKMAATISALQADGHQLVVTSGPDA
KEREMVERILALCPPQGVISLAGQLTLRQLAALIDHAKLFIGVDSVPMHMAAALQTPCIALFGPSKLVFWRPWQVIGNVI
WAGDYGDLPDPDAIDTGTDERYLDLIPTDAVIAAARSQLA

Sequences:

>Translated_360_residues
MMNDAPALAPDTSIQRILIVKLRHHGDMLLITPVINTLRQNYPQAQIDVLLYKETQEMLASHPALTNVFAIDRQWKKQGT
KAHLRHELNLIRQLKAQSYDLVVNLADQWRSALLSRLTGARIRLGFDFPKRQGFLWRHCHTHLVPVSDHARLHTVEQNLS
LLEPLNLPNISQQVTMSYPPQDWQTCEQLLQQQGISGDFIVVQPTSRWFFKCWSEEKMAATISALQADGHQLVVTSGPDA
KEREMVERILALCPPQGVISLAGQLTLRQLAALIDHAKLFIGVDSVPMHMAAALQTPCIALFGPSKLVFWRPWQVIGNVI
WAGDYGDLPDPDAIDTGTDERYLDLIPTDAVIAAARSQLA
>Mature_360_residues
MMNDAPALAPDTSIQRILIVKLRHHGDMLLITPVINTLRQNYPQAQIDVLLYKETQEMLASHPALTNVFAIDRQWKKQGT
KAHLRHELNLIRQLKAQSYDLVVNLADQWRSALLSRLTGARIRLGFDFPKRQGFLWRHCHTHLVPVSDHARLHTVEQNLS
LLEPLNLPNISQQVTMSYPPQDWQTCEQLLQQQGISGDFIVVQPTSRWFFKCWSEEKMAATISALQADGHQLVVTSGPDA
KEREMVERILALCPPQGVISLAGQLTLRQLAALIDHAKLFIGVDSVPMHMAAALQTPCIALFGPSKLVFWRPWQVIGNVI
WAGDYGDLPDPDAIDTGTDERYLDLIPTDAVIAAARSQLA

Specific function: Catalyzes heptose transfer to the lipopolysaccharide core. It transfers a heptose, called heptose(III), to the heptose(II) of the inner core [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=340, Percent_Identity=43.8235294117647, Blast_Score=290, Evalue=1e-79,
Organism=Escherichia coli, GI1790051, Length=293, Percent_Identity=22.8668941979522, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011916 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 40453; Mature: 40453

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNDAPALAPDTSIQRILIVKLRHHGDMLLITPVINTLRQNYPQAQIDVLLYKETQEMLA
CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEHHHHHHHHCCCCCCCEEEEEEHHHHHHHH
SHPALTNVFAIDRQWKKQGTKAHLRHELNLIRQLKAQSYDLVVNLADQWRSALLSRLTGA
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCC
RIRLGFDFPKRQGFLWRHCHTHLVPVSDHARLHTVEQNLSLLEPLNLPNISQQVTMSYPP
EEEEECCCCCCCCCEEECCCCEEEECCCCCCEEEHHHHHHHHCCCCCCCCCCEEEECCCC
QDWQTCEQLLQQQGISGDFIVVQPTSRWFFKCWSEEKMAATISALQADGHQLVVTSGPDA
CCHHHHHHHHHHCCCCCCEEEEECCCCCHHEECCCCHHHHHHHHHHCCCCEEEEECCCCH
KEREMVERILALCPPQGVISLAGQLTLRQLAALIDHAKLFIGVDSVPMHMAAALQTPCIA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCEEE
LFGPSKLVFWRPWQVIGNVIWAGDYGDLPDPDAIDTGTDERYLDLIPTDAVIAAARSQLA
EECCCEEEEECCHHHHCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure
MMNDAPALAPDTSIQRILIVKLRHHGDMLLITPVINTLRQNYPQAQIDVLLYKETQEMLA
CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEHHHHHHHHCCCCCCCEEEEEEHHHHHHHH
SHPALTNVFAIDRQWKKQGTKAHLRHELNLIRQLKAQSYDLVVNLADQWRSALLSRLTGA
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCC
RIRLGFDFPKRQGFLWRHCHTHLVPVSDHARLHTVEQNLSLLEPLNLPNISQQVTMSYPP
EEEEECCCCCCCCCEEECCCCEEEECCCCCCEEEHHHHHHHHCCCCCCCCCCEEEECCCC
QDWQTCEQLLQQQGISGDFIVVQPTSRWFFKCWSEEKMAATISALQADGHQLVVTSGPDA
CCHHHHHHHHHHCCCCCCEEEEECCCCCHHEECCCCHHHHHHHHHHCCCCEEEEECCCCH
KEREMVERILALCPPQGVISLAGQLTLRQLAALIDHAKLFIGVDSVPMHMAAALQTPCIA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCEEE
LFGPSKLVFWRPWQVIGNVIWAGDYGDLPDPDAIDTGTDERYLDLIPTDAVIAAARSQLA
EECCCEEEEECCHHHHCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA