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The map label for this gene is dinF [H]

Identifier: 157372692

GI number: 157372692

Start: 4930301

End: 4931665

Strand: Reverse

Name: dinF [H]

Synonym: Spro_4459

Alternate gene names: 157372692

Gene position: 4931665-4930301 (Counterclockwise)

Preceding gene: 157372693

Following gene: 157372691

Centisome position: 90.51

GC content: 59.05

Gene sequence:

>1365_bases
ATGCGCCTGCTTTCTGCCTTCACCAGCGATACCGATAAAGCCCTGTGGCGCCTTGCGCTGCCCATGATTTTCTCCAATAT
CACCGTGCCGCTGCTTGGGCTGGTAGATACCGCCGTCATCGGCCATCTCGACAGCCCGACCTATCTGGGTGGCGTAGCGG
TTGGCTCCATGGCCACCAGCTTCCTGTTTATGCTGTTGCTGTTTCTGCGTATGAGCACCACCGGGCTGACTGCTCAGGCG
TTGGGGGCACAAAATCCGCAGGGGCTGGCACGAGCCTTTATGCAGCCGTTGCTGCTGGCGGTGTTGGCCGGGGTGGCTAT
TGTGTTGCTGCGCTATCCGCTGATTGAGTTGGCACTAAAAATCGTCGGTGGCGATGGGGCGGTGCTGGAACAGGCTCGTT
TATTCCTCGAGATCCGCTGGCTGAGCGCCCCGGCGGCGCTGGCCAATATGGTGATCCTGGGTTGGTTGCTTGGCGTGCAA
TACGTGCGCGCACCAGTGATCCTGCTGATTGTTGGTAACCTGCTGAATATCGTATTGGATATCTGGCTGGTGATGGGACT
GGGCTGGAACGTGCAGGGGGCCGCGACCGCGACCGCCATCTCTGAATATGCCACGCTGCTGTTGGGATTATGGCTGTCCT
GGCGCGTAATGCGCATACGCGGCATTTCTGTGCCAATGCTGCGCCAAGCCTGGCGCGGTAATCTGCGGCGTCTGCTGGCG
TTGAATCGCGACATTATGCTGCGTTCATTGCTGCTGCAACTGTGTTTTGCCTCGCTGACCATCTTCGGTGCCCGGCTGGG
CGGCGAGGTGGTCGCGGTAAATGCGGTGCTGATGAATTTGCTGACCTTCACCGCTTATGCGCTGGACGGTTTTGCCTACG
CGGTAGAGGCACATTCGGGCCATGCCTATGGCGCCCGTGACGATAGCCAACTGCGTAAAGTATGGCGTGCGGCTTGCCGG
CAGGCCTGTCTGGTGGCGTTGGGCTTTGGTCTGCTCTATGCCGTTGCCGGGCAGCAAATCATTGCCGCCTTGACCTCTTT
ACCGGAGCTGCGTGCACTGGCGAGCCACTATCTGCCGTGGCAGGTAGTGCTGCCGTTGGTGGGAGTATGGTGCTATTTGC
TGGACGGCATGTTTATTGGTGCCACCCGCGGCGCAGAAATGCGTAACAGCATGGCAGTAGCCGCCGCCGGTTATGGGCTG
ACGCTGTTTACCCTACCTGTACTGGGCAACCATGGATTGTGGCTGGCGCTGGCGGTGTTCCTTTCGCTACGCGGCCTTGC
GCTCGGGTGGATTTGGCATTGCCACAGGGTGCGAGGGACCTGGTTTACAGCGGATGTGACACAGTCAAAAATGAGTAATA
ATTAG

Upstream 100 bases:

>100_bases
GGCCCCGAAGGGGTGTGGCTCATGGACGGGCCACATAACTGAGTGCAGATAACAACGCTGCAACTTGAAAGATGACGGGT
ATACACGGGAACATTTCACT

Downstream 100 bases:

>100_bases
TTTTTCTTATGTTTTTGTTTATATTAAGTTACATTTTCTTGAGCGAAACTCTTTCCGCTTAACTGCTGTTATTCTGGGGT
TTTTACTGACTTTTCTTTGT

Product: DNA-damage-inducible SOS response protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MRLLSAFTSDTDKALWRLALPMIFSNITVPLLGLVDTAVIGHLDSPTYLGGVAVGSMATSFLFMLLLFLRMSTTGLTAQA
LGAQNPQGLARAFMQPLLLAVLAGVAIVLLRYPLIELALKIVGGDGAVLEQARLFLEIRWLSAPAALANMVILGWLLGVQ
YVRAPVILLIVGNLLNIVLDIWLVMGLGWNVQGAATATAISEYATLLLGLWLSWRVMRIRGISVPMLRQAWRGNLRRLLA
LNRDIMLRSLLLQLCFASLTIFGARLGGEVVAVNAVLMNLLTFTAYALDGFAYAVEAHSGHAYGARDDSQLRKVWRAACR
QACLVALGFGLLYAVAGQQIIAALTSLPELRALASHYLPWQVVLPLVGVWCYLLDGMFIGATRGAEMRNSMAVAAAGYGL
TLFTLPVLGNHGLWLALAVFLSLRGLALGWIWHCHRVRGTWFTADVTQSKMSNN

Sequences:

>Translated_454_residues
MRLLSAFTSDTDKALWRLALPMIFSNITVPLLGLVDTAVIGHLDSPTYLGGVAVGSMATSFLFMLLLFLRMSTTGLTAQA
LGAQNPQGLARAFMQPLLLAVLAGVAIVLLRYPLIELALKIVGGDGAVLEQARLFLEIRWLSAPAALANMVILGWLLGVQ
YVRAPVILLIVGNLLNIVLDIWLVMGLGWNVQGAATATAISEYATLLLGLWLSWRVMRIRGISVPMLRQAWRGNLRRLLA
LNRDIMLRSLLLQLCFASLTIFGARLGGEVVAVNAVLMNLLTFTAYALDGFAYAVEAHSGHAYGARDDSQLRKVWRAACR
QACLVALGFGLLYAVAGQQIIAALTSLPELRALASHYLPWQVVLPLVGVWCYLLDGMFIGATRGAEMRNSMAVAAAGYGL
TLFTLPVLGNHGLWLALAVFLSLRGLALGWIWHCHRVRGTWFTADVTQSKMSNN
>Mature_454_residues
MRLLSAFTSDTDKALWRLALPMIFSNITVPLLGLVDTAVIGHLDSPTYLGGVAVGSMATSFLFMLLLFLRMSTTGLTAQA
LGAQNPQGLARAFMQPLLLAVLAGVAIVLLRYPLIELALKIVGGDGAVLEQARLFLEIRWLSAPAALANMVILGWLLGVQ
YVRAPVILLIVGNLLNIVLDIWLVMGLGWNVQGAATATAISEYATLLLGLWLSWRVMRIRGISVPMLRQAWRGNLRRLLA
LNRDIMLRSLLLQLCFASLTIFGARLGGEVVAVNAVLMNLLTFTAYALDGFAYAVEAHSGHAYGARDDSQLRKVWRAACR
QACLVALGFGLLYAVAGQQIIAALTSLPELRALASHYLPWQVVLPLVGVWCYLLDGMFIGATRGAEMRNSMAVAAAGYGL
TLFTLPVLGNHGLWLALAVFLSLRGLALGWIWHCHRVRGTWFTADVTQSKMSNN

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

Organism=Escherichia coli, GI1790477, Length=439, Percent_Identity=75.626423690205, Blast_Score=595, Evalue=1e-171,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 49277; Mature: 49277

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLSAFTSDTDKALWRLALPMIFSNITVPLLGLVDTAVIGHLDSPTYLGGVAVGSMATS
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
FLFMLLLFLRMSTTGLTAQALGAQNPQGLARAFMQPLLLAVLAGVAIVLLRYPLIELALK
HHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVGGDGAVLEQARLFLEIRWLSAPAALANMVILGWLLGVQYVRAPVILLIVGNLLNIVLD
HHCCCHHHHHHHHHHHHHHECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWLVMGLGWNVQGAATATAISEYATLLLGLWLSWRVMRIRGISVPMLRQAWRGNLRRLLA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LNRDIMLRSLLLQLCFASLTIFGARLGGEVVAVNAVLMNLLTFTAYALDGFAYAVEAHSG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
HAYGARDDSQLRKVWRAACRQACLVALGFGLLYAVAGQQIIAALTSLPELRALASHYLPW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCH
QVVLPLVGVWCYLLDGMFIGATRGAEMRNSMAVAAAGYGLTLFTLPVLGNHGLWLALAVF
HHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHH
LSLRGLALGWIWHCHRVRGTWFTADVTQSKMSNN
HHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCC
>Mature Secondary Structure
MRLLSAFTSDTDKALWRLALPMIFSNITVPLLGLVDTAVIGHLDSPTYLGGVAVGSMATS
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
FLFMLLLFLRMSTTGLTAQALGAQNPQGLARAFMQPLLLAVLAGVAIVLLRYPLIELALK
HHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVGGDGAVLEQARLFLEIRWLSAPAALANMVILGWLLGVQYVRAPVILLIVGNLLNIVLD
HHCCCHHHHHHHHHHHHHHECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWLVMGLGWNVQGAATATAISEYATLLLGLWLSWRVMRIRGISVPMLRQAWRGNLRRLLA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LNRDIMLRSLLLQLCFASLTIFGARLGGEVVAVNAVLMNLLTFTAYALDGFAYAVEAHSG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
HAYGARDDSQLRKVWRAACRQACLVALGFGLLYAVAGQQIIAALTSLPELRALASHYLPW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCH
QVVLPLVGVWCYLLDGMFIGATRGAEMRNSMAVAAAGYGLTLFTLPVLGNHGLWLALAVF
HHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHH
LSLRGLALGWIWHCHRVRGTWFTADVTQSKMSNN
HHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]