| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372631
Identifier: 157372631
GI number: 157372631
Start: 4860904
End: 4861896
Strand: Reverse
Name: 157372631
Synonym: Spro_4398
Alternate gene names: NA
Gene position: 4861896-4860904 (Counterclockwise)
Preceding gene: 157372632
Following gene: 157372630
Centisome position: 89.23
GC content: 55.59
Gene sequence:
>993_bases ATGAAGGAATATGGCACCGGCAGCGATATACAAAGAGTCGCACAGGCGGTGACGGGGGCGCTGCAGGCGCTGGCGGGGAA CAATCTTGCCGGAGCACTGGCGAGCGGCGCGGCACCGTATCTGGCGAGAGAAATCAAAGCGCGTATCGGTGATGACAACG TGGCCGCCAACGCGATGGCGCATGCGGTGCTGGGTGCGATAACCGCGCAGTTGAACAACCAGTCGGCGGTAGCGGGTGCG GTAGGTGCCGGTGGTGGCGAACTGGTAGCGCGGGTGATAGTAGAGATAAGGTTCCCGGGCCGTGACATAAGCAGCCTGAC AGAAGGTGAGAAGCAGGAGGTGAGTGCTTTGAGCCAGCTGGCCGCAGGACTGGCGGGCGGTCTCGTCTCAGACAGCACCG CAGGGGTCGTGACAGGTTCGCAAGCCGCTAAAAATGCGGTGGAGAATAACTTCTTGGGCGGGAATGAGGAAACTCAGACC AAGTTCGTGCAGGAACACGGCAAGAATATTGCGTCTTGCAGCACTGACCCAAGTTCAGCATCCTGCCAGAAAGGGCTGGC GATGAACGATGCGCTGATGGTGGCGCTTCCTGCAGGTCTTGGCGGTGGCGTTCTGGCCGCTGCGGCTCCGGAACTAGCGG CAGCAGCCAAGGCGGCGATACAAACCTGTGCGGGTAATGTAGTGCTGTGCCTGAATAATGCTGGTATCCAGATGTCGGAA GCCATCGTGCCGGGTGGTGAATGGGGAGCTAATAAATCACACTTCACAATGACGAAGGATGAACTGAAGACTGTCTTGCA GTCAGATACTGTTGTGAAGACACCGGTGCAATACTCACCATCTACTGGTAACTATATTCGTACTGTGGATATGGGGAAAA ATATTGGTGTTGATGCAATGAACAACAGTATGCCAACGTCAATTATGACGGTCATCACTGATAAGAAAGGTAATTTGGTC AATACGTTCCCGGGTAAGACGGTGGTGAGGTAA
Upstream 100 bases:
>100_bases TCCGCACCCAGGGTGATATTAATGGGCTGAAGGCGGCGAAGGATAAGCATCCGGGGCTGGACGCGAAAGCGTTGCGTAAA CGCCGGAATATCAAGCCGAG
Downstream 100 bases:
>100_bases CTATATGTTTATTGTTTACTTATGGGATAAAGTTATTGGTGAAAGTATTGCCTCATTGGAAGACTTTCAGGGGAATGAAA GTTTTTTAATCAGGGATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Adhesin; Filamentous Haemagglutinin Outer Membrane Protein; Adhesin/Hemagglutinin; Haemolysin-Like Protein; Hemagglutinin/Hemolysin-Related Protein; Hemagglutinin; Hemagglutinin-Related Protein; Member Of ShlA/HecA/FhaA Exoprotein Family
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MKEYGTGSDIQRVAQAVTGALQALAGNNLAGALASGAAPYLAREIKARIGDDNVAANAMAHAVLGAITAQLNNQSAVAGA VGAGGGELVARVIVEIRFPGRDISSLTEGEKQEVSALSQLAAGLAGGLVSDSTAGVVTGSQAAKNAVENNFLGGNEETQT KFVQEHGKNIASCSTDPSSASCQKGLAMNDALMVALPAGLGGGVLAAAAPELAAAAKAAIQTCAGNVVLCLNNAGIQMSE AIVPGGEWGANKSHFTMTKDELKTVLQSDTVVKTPVQYSPSTGNYIRTVDMGKNIGVDAMNNSMPTSIMTVITDKKGNLV NTFPGKTVVR
Sequences:
>Translated_330_residues MKEYGTGSDIQRVAQAVTGALQALAGNNLAGALASGAAPYLAREIKARIGDDNVAANAMAHAVLGAITAQLNNQSAVAGA VGAGGGELVARVIVEIRFPGRDISSLTEGEKQEVSALSQLAAGLAGGLVSDSTAGVVTGSQAAKNAVENNFLGGNEETQT KFVQEHGKNIASCSTDPSSASCQKGLAMNDALMVALPAGLGGGVLAAAAPELAAAAKAAIQTCAGNVVLCLNNAGIQMSE AIVPGGEWGANKSHFTMTKDELKTVLQSDTVVKTPVQYSPSTGNYIRTVDMGKNIGVDAMNNSMPTSIMTVITDKKGNLV NTFPGKTVVR >Mature_330_residues MKEYGTGSDIQRVAQAVTGALQALAGNNLAGALASGAAPYLAREIKARIGDDNVAANAMAHAVLGAITAQLNNQSAVAGA VGAGGGELVARVIVEIRFPGRDISSLTEGEKQEVSALSQLAAGLAGGLVSDSTAGVVTGSQAAKNAVENNFLGGNEETQT KFVQEHGKNIASCSTDPSSASCQKGLAMNDALMVALPAGLGGGVLAAAAPELAAAAKAAIQTCAGNVVLCLNNAGIQMSE AIVPGGEWGANKSHFTMTKDELKTVLQSDTVVKTPVQYSPSTGNYIRTVDMGKNIGVDAMNNSMPTSIMTVITDKKGNLV NTFPGKTVVR
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33326; Mature: 33326
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEYGTGSDIQRVAQAVTGALQALAGNNLAGALASGAAPYLAREIKARIGDDNVAANAMA CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH HAVLGAITAQLNNQSAVAGAVGAGGGELVARVIVEIRFPGRDISSLTEGEKQEVSALSQL HHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHEECCCCCHHHHHCCHHHHHHHHHHH AAGLAGGLVSDSTAGVVTGSQAAKNAVENNFLGGNEETQTKFVQEHGKNIASCSTDPSSA HHHHHCCCCCCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH SCQKGLAMNDALMVALPAGLGGGVLAAAAPELAAAAKAAIQTCAGNVVLCLNNAGIQMSE HHHCCCCCCCEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEHH AIVPGGEWGANKSHFTMTKDELKTVLQSDTVVKTPVQYSPSTGNYIRTVDMGKNIGVDAM EECCCCCCCCCCCCEEECHHHHHHHHHCCCEEECCCEECCCCCCEEEEEECCCCCCCCCC NNSMPTSIMTVITDKKGNLVNTFPGKTVVR CCCCCCEEEEEEECCCCCEEEECCCCCCCC >Mature Secondary Structure MKEYGTGSDIQRVAQAVTGALQALAGNNLAGALASGAAPYLAREIKARIGDDNVAANAMA CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH HAVLGAITAQLNNQSAVAGAVGAGGGELVARVIVEIRFPGRDISSLTEGEKQEVSALSQL HHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHEECCCCCHHHHHCCHHHHHHHHHHH AAGLAGGLVSDSTAGVVTGSQAAKNAVENNFLGGNEETQTKFVQEHGKNIASCSTDPSSA HHHHHCCCCCCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH SCQKGLAMNDALMVALPAGLGGGVLAAAAPELAAAAKAAIQTCAGNVVLCLNNAGIQMSE HHHCCCCCCCEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEHH AIVPGGEWGANKSHFTMTKDELKTVLQSDTVVKTPVQYSPSTGNYIRTVDMGKNIGVDAM EECCCCCCCCCCCCEEECHHHHHHHHHCCCEEECCCEECCCCCCEEEEEECCCCCCCCCC NNSMPTSIMTVITDKKGNLVNTFPGKTVVR CCCCCCEEEEEEECCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA