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The map label for this gene is ygjR [H]

Identifier: 157372549

GI number: 157372549

Start: 4785487

End: 4786467

Strand: Direct

Name: ygjR [H]

Synonym: Spro_4316

Alternate gene names: 157372549

Gene position: 4785487-4786467 (Clockwise)

Preceding gene: 157372548

Following gene: 157372550

Centisome position: 87.83

GC content: 55.66

Gene sequence:

>981_bases
ATGATTCGCTTTGCCGTTGTTGGTACCAACTGGATTACGGAACGCTTTATTGACGCCGCACACGAAAGCGGCAAATTGAA
GCTGACCGCCGTCTATTCGCGCAAGCTGGAACAGGCGCAGGCATTTGGTGCCAACTACCCCGTCAGTCTGTTTTTCGATT
CCCTGGAAGCGCTGGCCCAGTCAGACGCCATCGACGCGGTTTACATCGCCAGCCCCAATAGCCTGCATTACCAGCAGTCG
TTGTTGTTCCTCAGCCATAAAAAACACGTAATTTGCGAAAAACCGCTGGTATCCAACCTGCGCGAAGCCGAAAAGCTGGT
GGCCTGTGCCCGTGAAAATCAGGTGGTGCTGTTCGAAGCCTTTAAAAGCGCCCACCTGCCGAATTTCCTGGCCTTGCAGC
AGACGCTGCCGAAAATCGGCCGGTTGCGGAAAGCCTTTATCAACTACTGCCAATACTCTTCTCGCTACCCACGCTATCTG
GCCGGTGAAAATCCAAACACCTTCAACCCGCAGTTTTCCAACGGTTCGATCATGGACATTGGTTATTACTGCCTGGCCAG
TGCCGTGGCGCTGTTCGGTGAGCCAAAATCGGTGATCGCCAGCGCTAGCTTGCTGGATACCGGCGTTGATGCGCACGGCA
CCGCCTGCCTCAACTACGGCGACTTCGATGTGACAATCTCCCACTCCAAGGTCAGCAACTCGGACATTCCGAGCGAGATC
CAGGGCGAAGAAGGCACGCTGGTAATTGAGAAAATCTCGGAGTGTCAGGGCGTAGTGCTGACGCCACGCGGTGGTCAACG
CCAGGATCTGACCCAGCCGCAGCATATCAATACCATGCTGTACGAAGCGCAAGTCTTCGCCGAACTGGTGGAGAAACGGC
AGGTAGAACATCCGGGGCTGGAAAACTCGCTGATTATCGCCCGCCTGCTGACCGAAATCCGCCGCCAGACCGGCGTAGTG
TTTCCTGCCGACGGAGAATGA

Upstream 100 bases:

>100_bases
CCCGGCTGTATCTGACTCACCTCTCCGTGTTTGGCAATCTGTATACCTGACGATTCCCTGTGATACTCTGATTTCTTACG
TCTGGGAACCGGAGATATCT

Downstream 100 bases:

>100_bases
CATGAAACCGTTATTACTGATGCAGACCGGCGACGCGCCGGAAGTTATCCGCCAGGAAAAGGCCAATTTCGATGGTATGT
TCCTGCAACAGGGGAATATC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MIRFAVVGTNWITERFIDAAHESGKLKLTAVYSRKLEQAQAFGANYPVSLFFDSLEALAQSDAIDAVYIASPNSLHYQQS
LLFLSHKKHVICEKPLVSNLREAEKLVACARENQVVLFEAFKSAHLPNFLALQQTLPKIGRLRKAFINYCQYSSRYPRYL
AGENPNTFNPQFSNGSIMDIGYYCLASAVALFGEPKSVIASASLLDTGVDAHGTACLNYGDFDVTISHSKVSNSDIPSEI
QGEEGTLVIEKISECQGVVLTPRGGQRQDLTQPQHINTMLYEAQVFAELVEKRQVEHPGLENSLIIARLLTEIRRQTGVV
FPADGE

Sequences:

>Translated_326_residues
MIRFAVVGTNWITERFIDAAHESGKLKLTAVYSRKLEQAQAFGANYPVSLFFDSLEALAQSDAIDAVYIASPNSLHYQQS
LLFLSHKKHVICEKPLVSNLREAEKLVACARENQVVLFEAFKSAHLPNFLALQQTLPKIGRLRKAFINYCQYSSRYPRYL
AGENPNTFNPQFSNGSIMDIGYYCLASAVALFGEPKSVIASASLLDTGVDAHGTACLNYGDFDVTISHSKVSNSDIPSEI
QGEEGTLVIEKISECQGVVLTPRGGQRQDLTQPQHINTMLYEAQVFAELVEKRQVEHPGLENSLIIARLLTEIRRQTGVV
FPADGE
>Mature_326_residues
MIRFAVVGTNWITERFIDAAHESGKLKLTAVYSRKLEQAQAFGANYPVSLFFDSLEALAQSDAIDAVYIASPNSLHYQQS
LLFLSHKKHVICEKPLVSNLREAEKLVACARENQVVLFEAFKSAHLPNFLALQQTLPKIGRLRKAFINYCQYSSRYPRYL
AGENPNTFNPQFSNGSIMDIGYYCLASAVALFGEPKSVIASASLLDTGVDAHGTACLNYGDFDVTISHSKVSNSDIPSEI
QGEEGTLVIEKISECQGVVLTPRGGQRQDLTQPQHINTMLYEAQVFAELVEKRQVEHPGLENSLIIARLLTEIRRQTGVV
FPADGE

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=344, Percent_Identity=25.8720930232558, Blast_Score=101, Evalue=1e-21,
Organism=Escherichia coli, GI145693182, Length=324, Percent_Identity=73.4567901234568, Blast_Score=502, Evalue=1e-143,
Organism=Escherichia coli, GI1787574, Length=230, Percent_Identity=27.8260869565217, Blast_Score=68, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24581117, Length=344, Percent_Identity=26.7441860465116, Blast_Score=111, Evalue=7e-25,
Organism=Drosophila melanogaster, GI24581115, Length=335, Percent_Identity=25.0746268656716, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24584727, Length=300, Percent_Identity=26, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36115; Mature: 36115

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFAVVGTNWITERFIDAAHESGKLKLTAVYSRKLEQAQAFGANYPVSLFFDSLEALAQ
CEEEEEECCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SDAIDAVYIASPNSLHYQQSLLFLSHKKHVICEKPLVSNLREAEKLVACARENQVVLFEA
CCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHCCCCEEEEEE
FKSAHLPNFLALQQTLPKIGRLRKAFINYCQYSSRYPRYLAGENPNTFNPQFSNGSIMDI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCEEHH
GYYCLASAVALFGEPKSVIASASLLDTGVDAHGTACLNYGDFDVTISHSKVSNSDIPSEI
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCC
QGEEGTLVIEKISECQGVVLTPRGGQRQDLTQPQHINTMLYEAQVFAELVEKRQVEHPGL
CCCCCCEEEEEHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
ENSLIIARLLTEIRRQTGVVFPADGE
CCHHHHHHHHHHHHHHCCEEECCCCC
>Mature Secondary Structure
MIRFAVVGTNWITERFIDAAHESGKLKLTAVYSRKLEQAQAFGANYPVSLFFDSLEALAQ
CEEEEEECCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SDAIDAVYIASPNSLHYQQSLLFLSHKKHVICEKPLVSNLREAEKLVACARENQVVLFEA
CCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHCCCCEEEEEE
FKSAHLPNFLALQQTLPKIGRLRKAFINYCQYSSRYPRYLAGENPNTFNPQFSNGSIMDI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCEEHH
GYYCLASAVALFGEPKSVIASASLLDTGVDAHGTACLNYGDFDVTISHSKVSNSDIPSEI
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCC
QGEEGTLVIEKISECQGVVLTPRGGQRQDLTQPQHINTMLYEAQVFAELVEKRQVEHPGL
CCCCCCEEEEEHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
ENSLIIARLLTEIRRQTGVVFPADGE
CCHHHHHHHHHHHHHHCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]