Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is yehB [H]

Identifier: 157372388

GI number: 157372388

Start: 4608190

End: 4610700

Strand: Direct

Name: yehB [H]

Synonym: Spro_4155

Alternate gene names: 157372388

Gene position: 4608190-4610700 (Clockwise)

Preceding gene: 157372387

Following gene: 157372389

Centisome position: 84.57

GC content: 53.48

Gene sequence:

>2511_bases
ATGACGATAAATAAAACCCTCACTTCGCTGCTGACATTGACGTCAATTCTGCTGACTAACCGGGCAGTCGCTGTCGAGTT
CGACACCCGTTTACTGGCAGGGGCGTCGCAAGAAGCCGACCTTTCACGCTTTTATCGCCAGTCAGACCTCCCCGCTGGGC
AACATACCTTTGATATCTATGTTAATGGCAACTGGAAGGGACGTTTCCCGCTGCAACTGGGGGAGCAGCCTGAGCAGATC
GCAATGCGCTATGAGGATGCCGCCGTGTTGGGGATCGATCTCACCGCCTTGCCCAAACAGCAAAAGGTTACGCAACTTCT
GCCCCTTAACGCACTGGTTCAAGGCGGCAGCGTCACACAGGAAACCGATACGCTCAGCATGAAACTGTCGGTACCGCAGG
CGCATATTATCCACGCGGAAAATGGCTATGTTGACCCACAGTTCTGGCAACAGGGCGAATCTGCCCTGCTATTTTCCTAC
AATACCACCTACTATCGTTCACAATTCAAAACCGGCAATACTGCTACCCGGGACGATCTGTACGCCGGGTTGAATTCAGG
CTTTAACCTTGAAGGCTGGCAGTTCCGTGATAACAGTACCTTTTCACATTATTCCGGCCGCGACAGCCAATGGAGGAACA
ATACCCGTTATTTGCAGCACGGATTTTCATCTATTACCTCAACGTTAACAGGAGGCGATTTCTATTCACCTGGCAATATG
TTTGATTCTATCCGTTTGCGCGGGATCTCACTGGCATCCGATACCAATATGTTGCCCAATTCCCAACAGGGATTCTCACC
CGTGGTTCACGGCGTGGCACAAACTAATGCTCTGGTAAAAGTGATGCAGAGCGGTAACGTGATTTACCAGGAAAACGTCC
CGCCAGGTGCATTTAGCCTTGACAGCATTCAGCCCACCGGCTCCGGTGGCGATCTGCTGGTGATCGTGAAAGAAGCGGAC
GGCAGTGAACAGTCTTTCACCGTGCCCTTTTCCGCCGTGCCGAATATGTTGAAGCCGGGTATCGCCAAATACGCTCTGTT
GGCCGGCAAGGTTAAGCAAAGCAATACTCGTTACAGCCCAGATTTCCTGCAAAGTTCGTTGCAATACGGCTTCAACAATT
TGGTTACCGGTTATGCCGGTGCACTTATCGGTAACGACTACCGTTCTTATCTGCTGGGGAGCGGCTGGAACCTGCCCTTT
GGGGCCGTATCCGTGGATATCACCCAGGCAGACGCTCATTTTCCGGGCCGTAGTGAAAGCGGACAAAGTTACCGAATCGC
CTACAGCAAATTCCTGGACACCACTGCCACCAACTTTACCCTGGCCGCCTACCGTTATTCGACCAAAGGTTATTATAGCT
TTTCAGACGCTATTTATACCCACGACGGTTATCGCCAACTGGCCGATCGACAACCCGGTATGCAAAATCCAGCGGGAGAA
TGGTCAGGAGATCCGTTGGATATGAATACGCTGGATGCGCTGCGTTCGGCTCGGCCACGTAATACCTTTAACCTGAGCTT
GAACCAACGGCTAGGGGATAGTCTGGGCACACTATTTTTCTCTGGTACCCAACGTGATTATTGGACCGAGCAGGGCAATA
GCCGCGAATACCAACTGGGCTATTCCAACAACTTCGGCAAAGTGGATTACAATCTCTCCGCCAGCCGCGTTCGTAATGAC
AGCCACGAGGAAGAAACCCGGTATTACCTGTCGATCAATGTGCCCTTCGATGCTTTCGAACACACCGCCTATTTGAGCAG
CAGCCTGTCGATGACAGACAACCATTACCAGCAGAGCCAGCTCAGTGTCAGCGGCGTGTCCGGCGACGCCAACCAACTGA
GTTATACGCTGTCCGGCGCCAATCAGCCCGGCGGTGAAAACATGGCTGGAGTGAGCGCCAGTTACCGTACGTCGCTTTCG
ACACTCGGCGGGTCTTACAGCGAAGCTAGCGATTACCGGCAGGCGGGTCTTAGCGCGCGCGGCAGCTTGGTCGCTATTCC
CTGGGATGTACTGGCCGCCAATGAAATTGGCCACACCCTGACGGTAGTCGACGCTCCTCAGGCCGCCGGCCTGATGGTTA
ATGGCGATGAAAGTATTATCACTAACCGGGACGGATTGGCACTGGTTCCCTACGCCACACCGTATCGTCAAAATACGCTT
ACGCTCTCGGACACCAACGACGCTTCCGGCGCAGAAATTACCAACAACGTCGGTTATATCGTGCCGTTCTACGGTGCGGT
CAATCGCGTCAAATTTGCCACCGATCTGCGCCAATCTTATACCCTGACCGCCAGCTTCCCCGACGGCAAACCCCTGCCAT
TCGGCACTGAGGTGGTCGATCAAAACGGGCGCGCCGTCGGTTATGTCGGCCAGGCCAGTGTCCTGTACGTCAAGAGTGAA
CAGCCGCCGAAGCGCCTCGACGTTAAACTCAACCGAGCTGACGCAAATAGTTGCGTCATTGATCTGACTACCGCCGATAT
TGCGACAGTGAACAAAGTTATTTGCCGCTGA

Upstream 100 bases:

>100_bases
ACCACTAAAAACCAATGACAGGCTATCGCTAAAATATGTTGATGACCTTGGTGCCTATAAAGAAAAAATCATAACGTCTC
ATTGATGAGGTTAAGCAAGG

Downstream 100 bases:

>100_bases
TCCCGTGTGATTGAGGAAATTATGAAAACGTTATATTTATCCATTTTAATCGCCGGTCTTTACGCTGGCGAAAGCCAGGC
AAAATGCTACGGAAATCCAC

Product: fimbrial biogenesis outer membrane usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 836; Mature: 835

Protein sequence:

>836_residues
MTINKTLTSLLTLTSILLTNRAVAVEFDTRLLAGASQEADLSRFYRQSDLPAGQHTFDIYVNGNWKGRFPLQLGEQPEQI
AMRYEDAAVLGIDLTALPKQQKVTQLLPLNALVQGGSVTQETDTLSMKLSVPQAHIIHAENGYVDPQFWQQGESALLFSY
NTTYYRSQFKTGNTATRDDLYAGLNSGFNLEGWQFRDNSTFSHYSGRDSQWRNNTRYLQHGFSSITSTLTGGDFYSPGNM
FDSIRLRGISLASDTNMLPNSQQGFSPVVHGVAQTNALVKVMQSGNVIYQENVPPGAFSLDSIQPTGSGGDLLVIVKEAD
GSEQSFTVPFSAVPNMLKPGIAKYALLAGKVKQSNTRYSPDFLQSSLQYGFNNLVTGYAGALIGNDYRSYLLGSGWNLPF
GAVSVDITQADAHFPGRSESGQSYRIAYSKFLDTTATNFTLAAYRYSTKGYYSFSDAIYTHDGYRQLADRQPGMQNPAGE
WSGDPLDMNTLDALRSARPRNTFNLSLNQRLGDSLGTLFFSGTQRDYWTEQGNSREYQLGYSNNFGKVDYNLSASRVRND
SHEEETRYYLSINVPFDAFEHTAYLSSSLSMTDNHYQQSQLSVSGVSGDANQLSYTLSGANQPGGENMAGVSASYRTSLS
TLGGSYSEASDYRQAGLSARGSLVAIPWDVLAANEIGHTLTVVDAPQAAGLMVNGDESIITNRDGLALVPYATPYRQNTL
TLSDTNDASGAEITNNVGYIVPFYGAVNRVKFATDLRQSYTLTASFPDGKPLPFGTEVVDQNGRAVGYVGQASVLYVKSE
QPPKRLDVKLNRADANSCVIDLTTADIATVNKVICR

Sequences:

>Translated_836_residues
MTINKTLTSLLTLTSILLTNRAVAVEFDTRLLAGASQEADLSRFYRQSDLPAGQHTFDIYVNGNWKGRFPLQLGEQPEQI
AMRYEDAAVLGIDLTALPKQQKVTQLLPLNALVQGGSVTQETDTLSMKLSVPQAHIIHAENGYVDPQFWQQGESALLFSY
NTTYYRSQFKTGNTATRDDLYAGLNSGFNLEGWQFRDNSTFSHYSGRDSQWRNNTRYLQHGFSSITSTLTGGDFYSPGNM
FDSIRLRGISLASDTNMLPNSQQGFSPVVHGVAQTNALVKVMQSGNVIYQENVPPGAFSLDSIQPTGSGGDLLVIVKEAD
GSEQSFTVPFSAVPNMLKPGIAKYALLAGKVKQSNTRYSPDFLQSSLQYGFNNLVTGYAGALIGNDYRSYLLGSGWNLPF
GAVSVDITQADAHFPGRSESGQSYRIAYSKFLDTTATNFTLAAYRYSTKGYYSFSDAIYTHDGYRQLADRQPGMQNPAGE
WSGDPLDMNTLDALRSARPRNTFNLSLNQRLGDSLGTLFFSGTQRDYWTEQGNSREYQLGYSNNFGKVDYNLSASRVRND
SHEEETRYYLSINVPFDAFEHTAYLSSSLSMTDNHYQQSQLSVSGVSGDANQLSYTLSGANQPGGENMAGVSASYRTSLS
TLGGSYSEASDYRQAGLSARGSLVAIPWDVLAANEIGHTLTVVDAPQAAGLMVNGDESIITNRDGLALVPYATPYRQNTL
TLSDTNDASGAEITNNVGYIVPFYGAVNRVKFATDLRQSYTLTASFPDGKPLPFGTEVVDQNGRAVGYVGQASVLYVKSE
QPPKRLDVKLNRADANSCVIDLTTADIATVNKVICR
>Mature_835_residues
TINKTLTSLLTLTSILLTNRAVAVEFDTRLLAGASQEADLSRFYRQSDLPAGQHTFDIYVNGNWKGRFPLQLGEQPEQIA
MRYEDAAVLGIDLTALPKQQKVTQLLPLNALVQGGSVTQETDTLSMKLSVPQAHIIHAENGYVDPQFWQQGESALLFSYN
TTYYRSQFKTGNTATRDDLYAGLNSGFNLEGWQFRDNSTFSHYSGRDSQWRNNTRYLQHGFSSITSTLTGGDFYSPGNMF
DSIRLRGISLASDTNMLPNSQQGFSPVVHGVAQTNALVKVMQSGNVIYQENVPPGAFSLDSIQPTGSGGDLLVIVKEADG
SEQSFTVPFSAVPNMLKPGIAKYALLAGKVKQSNTRYSPDFLQSSLQYGFNNLVTGYAGALIGNDYRSYLLGSGWNLPFG
AVSVDITQADAHFPGRSESGQSYRIAYSKFLDTTATNFTLAAYRYSTKGYYSFSDAIYTHDGYRQLADRQPGMQNPAGEW
SGDPLDMNTLDALRSARPRNTFNLSLNQRLGDSLGTLFFSGTQRDYWTEQGNSREYQLGYSNNFGKVDYNLSASRVRNDS
HEEETRYYLSINVPFDAFEHTAYLSSSLSMTDNHYQQSQLSVSGVSGDANQLSYTLSGANQPGGENMAGVSASYRTSLST
LGGSYSEASDYRQAGLSARGSLVAIPWDVLAANEIGHTLTVVDAPQAAGLMVNGDESIITNRDGLALVPYATPYRQNTLT
LSDTNDASGAEITNNVGYIVPFYGAVNRVKFATDLRQSYTLTASFPDGKPLPFGTEVVDQNGRAVGYVGQASVLYVKSEQ
PPKRLDVKLNRADANSCVIDLTTADIATVNKVICR

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1788427, Length=842, Percent_Identity=36.9358669833729, Blast_Score=551, Evalue=1e-158,
Organism=Escherichia coli, GI1786332, Length=865, Percent_Identity=31.6763005780347, Blast_Score=381, Evalue=1e-106,
Organism=Escherichia coli, GI1790772, Length=840, Percent_Identity=31.1904761904762, Blast_Score=372, Evalue=1e-104,
Organism=Escherichia coli, GI1787172, Length=835, Percent_Identity=32.4550898203593, Blast_Score=365, Evalue=1e-102,
Organism=Escherichia coli, GI1786744, Length=818, Percent_Identity=29.9511002444988, Blast_Score=342, Evalue=4e-95,
Organism=Escherichia coli, GI1789533, Length=850, Percent_Identity=27.4117647058824, Blast_Score=323, Evalue=3e-89,
Organism=Escherichia coli, GI87081778, Length=846, Percent_Identity=24.822695035461, Blast_Score=177, Evalue=2e-45,
Organism=Escherichia coli, GI1789610, Length=828, Percent_Identity=23.1884057971014, Blast_Score=115, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 91399; Mature: 91268

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINKTLTSLLTLTSILLTNRAVAVEFDTRLLAGASQEADLSRFYRQSDLPAGQHTFDIY
CCCHHHHHHHHHHHHHHHHCCEEEEEECCCEECCCCCCHHHHHHHHHCCCCCCCEEEEEE
VNGNWKGRFPLQLGEQPEQIAMRYEDAAVLGIDLTALPKQQKVTQLLPLNALVQGGSVTQ
EECCCCEECCCCCCCCHHHHHEEECCEEEEEEEEECCCCHHHHHHHCCHHHHCCCCCCCC
ETDTLSMKLSVPQAHIIHAENGYVDPQFWQQGESALLFSYNTTYYRSQFKTGNTATRDDL
CCCEEEEEEECCCEEEEECCCCCCCHHHHHCCCCEEEEEECCCEEEEECCCCCCCCHHHH
YAGLNSGFNLEGWQFRDNSTFSHYSGRDSQWRNNTRYLQHGFSSITSTLTGGDFYSPGNM
HHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
FDSIRLRGISLASDTNMLPNSQQGFSPVVHGVAQTNALVKVMQSGNVIYQENVPPGAFSL
CCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEC
DSIQPTGSGGDLLVIVKEADGSEQSFTVPFSAVPNMLKPGIAKYALLAGKVKQSNTRYSP
CCCCCCCCCCCEEEEEECCCCCCCEEEEEHHHCCHHHCCCHHHHHHHHCCHHCCCCCCCH
DFLQSSLQYGFNNLVTGYAGALIGNDYRSYLLGSGWNLPFGAVSVDITQADAHFPGRSES
HHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCC
GQSYRIAYSKFLDTTATNFTLAAYRYSTKGYYSFSDAIYTHDGYRQLADRQPGMQNPAGE
CCEEEEEHHHHHCCCCCCEEEEEEEECCCCEEEECCEEEECCHHHHHHHCCCCCCCCCCC
WSGDPLDMNTLDALRSARPRNTFNLSLNQRLGDSLGTLFFSGTQRDYWTEQGNSREYQLG
CCCCCCCCHHHHHHHHCCCCCEEEEEEHHHHCCCHHEEEECCCCCCCCCCCCCCEEEEEC
YSNNFGKVDYNLSASRVRNDSHEEETRYYLSINVPFDAFEHTAYLSSSLSMTDNHYQQSQ
CCCCCCEEEECCCHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHCE
LSVSGVSGDANQLSYTLSGANQPGGENMAGVSASYRTSLSTLGGSYSEASDYRQAGLSAR
EEEECCCCCCHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC
GSLVAIPWDVLAANEIGHTLTVVDAPQAAGLMVNGDESIITNRDGLALVPYATPYRQNTL
CCEEEECHHHEEHHCCCCEEEEEECCCCCCEEEECCCCEEECCCCEEEECCCCCCCCCEE
TLSDTNDASGAEITNNVGYIVPFYGAVNRVKFATDLRQSYTLTASFPDGKPLPFGTEVVD
EEECCCCCCCCEEECCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHC
QNGRAVGYVGQASVLYVKSEQPPKRLDVKLNRADANSCVIDLTTADIATVNKVICR
CCCCEEEEECCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHCC
>Mature Secondary Structure 
TINKTLTSLLTLTSILLTNRAVAVEFDTRLLAGASQEADLSRFYRQSDLPAGQHTFDIY
CCHHHHHHHHHHHHHHHHCCEEEEEECCCEECCCCCCHHHHHHHHHCCCCCCCEEEEEE
VNGNWKGRFPLQLGEQPEQIAMRYEDAAVLGIDLTALPKQQKVTQLLPLNALVQGGSVTQ
EECCCCEECCCCCCCCHHHHHEEECCEEEEEEEEECCCCHHHHHHHCCHHHHCCCCCCCC
ETDTLSMKLSVPQAHIIHAENGYVDPQFWQQGESALLFSYNTTYYRSQFKTGNTATRDDL
CCCEEEEEEECCCEEEEECCCCCCCHHHHHCCCCEEEEEECCCEEEEECCCCCCCCHHHH
YAGLNSGFNLEGWQFRDNSTFSHYSGRDSQWRNNTRYLQHGFSSITSTLTGGDFYSPGNM
HHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
FDSIRLRGISLASDTNMLPNSQQGFSPVVHGVAQTNALVKVMQSGNVIYQENVPPGAFSL
CCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEC
DSIQPTGSGGDLLVIVKEADGSEQSFTVPFSAVPNMLKPGIAKYALLAGKVKQSNTRYSP
CCCCCCCCCCCEEEEEECCCCCCCEEEEEHHHCCHHHCCCHHHHHHHHCCHHCCCCCCCH
DFLQSSLQYGFNNLVTGYAGALIGNDYRSYLLGSGWNLPFGAVSVDITQADAHFPGRSES
HHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCC
GQSYRIAYSKFLDTTATNFTLAAYRYSTKGYYSFSDAIYTHDGYRQLADRQPGMQNPAGE
CCEEEEEHHHHHCCCCCCEEEEEEEECCCCEEEECCEEEECCHHHHHHHCCCCCCCCCCC
WSGDPLDMNTLDALRSARPRNTFNLSLNQRLGDSLGTLFFSGTQRDYWTEQGNSREYQLG
CCCCCCCCHHHHHHHHCCCCCEEEEEEHHHHCCCHHEEEECCCCCCCCCCCCCCEEEEEC
YSNNFGKVDYNLSASRVRNDSHEEETRYYLSINVPFDAFEHTAYLSSSLSMTDNHYQQSQ
CCCCCCEEEECCCHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHCE
LSVSGVSGDANQLSYTLSGANQPGGENMAGVSASYRTSLSTLGGSYSEASDYRQAGLSAR
EEEECCCCCCHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC
GSLVAIPWDVLAANEIGHTLTVVDAPQAAGLMVNGDESIITNRDGLALVPYATPYRQNTL
CCEEEECHHHEEHHCCCCEEEEEECCCCCCEEEECCCCEEECCCCEEEECCCCCCCCCEE
TLSDTNDASGAEITNNVGYIVPFYGAVNRVKFATDLRQSYTLTASFPDGKPLPFGTEVVD
EEECCCCCCCCEEECCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHC
QNGRAVGYVGQASVLYVKSEQPPKRLDVKLNRADANSCVIDLTTADIATVNKVICR
CCCCEEEEECCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097040 [H]