| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372303
Identifier: 157372303
GI number: 157372303
Start: 4509963
End: 4511132
Strand: Direct
Name: 157372303
Synonym: Spro_4069
Alternate gene names: NA
Gene position: 4509963-4511132 (Clockwise)
Preceding gene: 157372302
Following gene: 157372304
Centisome position: 82.77
GC content: 45.73
Gene sequence:
>1170_bases ATGGGAAGTAAAATTGGTTTTATCGGCAGTGGTAAACTGCTTTTAGATCGGGCGAAGTCATTTGGTCTTTATGTGGTACT GATTCAAAAACAGTCACTTGCTTCGATGGAAGCTATTGCACTGGCAGACAGCGTTCTGTTGTGTGACTATGATGCCGCTG ATAATAAAAAGATTATATTGGATTTCTTACGGGAGCAAGGAATCGAAAAGGTCCTGACGCTTTCTGAGAAAGCCTTGCCG GCAGCGGCATGGATAAATGACGAGTTATCGCACGATACTAAAAATAGTACGACCGCTGAAATAGTCAAAAATAAAATATT AATGCGTGATACACTTAAGGGAACCCCCTACGGTAATGTCAACTATCATGCGGTCCGTTCCGCGAATGATCTGTCTCAGG CCGCTGCCCTGCTCGGTTTTCCATTTATTCTGAAACCCTCTCGGGGAGTGGGAAGCGAAAATGTTCATCTTGTTGTAGAT GATAAACAACTTCCTACAATTAACGTTCAACAGACATTAATCGCTGAACAGTACATCGGGGGAAAGGAATATTCCATTGA GGCATATTCTGTCAATGGGGTACATACCGTTCACGCGGTCACCGAGAAATCCCTGTTTGATAATGAAGACTCCCGGTTTG TTGAGCATGGTCATGTTGTCTCTAGGGAGAATAATGATGGGCCGTTTTTTGCCGCGATCGATGATTTTGTCTGTGGCTTC TTATCCCTTATCGGGATTGAGTCCGGCGCGACCCATACCGAAGTGAAGGTCGTTCGGAGTGGCATACACATCATTGAGTC CCATAATCGGGTCGGCGGCGACAATATTCCTGAATTAGTTTACCATGCCACGGGAGTCGATCTGTATTCACTGGCGATAC AAGATGCGTCGGGCCTGCCTTTGGATAATACGCGCAAGCCGGTGAGCAATAATAGTGGGATCCTCTTCTTTGATTTTGAG CCTGGTCAGGTCAGTAGTCTTTGCGGTGAACAACGTGTTAAACTGTTACCCTTCGTCAAAGACGTAAGTTTACCTGAACT CATCAATGCGCCCCTTTCCCGCCCCGTCGATTCTTTTTCACGTAATGGCTATGTGATTTGCAGCACACCCGAGGATGTGA AAAGTAAGCTCGAGCTGTGCCAAACCCTGATAAAACCGATATACATTTGA
Upstream 100 bases:
>100_bases ATTGAGCTGCGTGTTACCGCTCTGCTCGATGGTAATGGTTTCAATATTACCCAGTCGGCATTGTCCTGACTTGACAATAC ACTTTATTTTGGTGGTGAGT
Downstream 100 bases:
>100_bases GTGGGAACAGTCAAATATGATTCAGGACGCAAAATGAGCAGAACTAACTATATACTCATGTTCGTTATGCTAATCTCTTG TATTAGCATGTTTTCGTTTT
Product: phosphoribosylglycinamide synthetase ATP-grasp domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MGSKIGFIGSGKLLLDRAKSFGLYVVLIQKQSLASMEAIALADSVLLCDYDAADNKKIILDFLREQGIEKVLTLSEKALP AAAWINDELSHDTKNSTTAEIVKNKILMRDTLKGTPYGNVNYHAVRSANDLSQAAALLGFPFILKPSRGVGSENVHLVVD DKQLPTINVQQTLIAEQYIGGKEYSIEAYSVNGVHTVHAVTEKSLFDNEDSRFVEHGHVVSRENNDGPFFAAIDDFVCGF LSLIGIESGATHTEVKVVRSGIHIIESHNRVGGDNIPELVYHATGVDLYSLAIQDASGLPLDNTRKPVSNNSGILFFDFE PGQVSSLCGEQRVKLLPFVKDVSLPELINAPLSRPVDSFSRNGYVICSTPEDVKSKLELCQTLIKPIYI
Sequences:
>Translated_389_residues MGSKIGFIGSGKLLLDRAKSFGLYVVLIQKQSLASMEAIALADSVLLCDYDAADNKKIILDFLREQGIEKVLTLSEKALP AAAWINDELSHDTKNSTTAEIVKNKILMRDTLKGTPYGNVNYHAVRSANDLSQAAALLGFPFILKPSRGVGSENVHLVVD DKQLPTINVQQTLIAEQYIGGKEYSIEAYSVNGVHTVHAVTEKSLFDNEDSRFVEHGHVVSRENNDGPFFAAIDDFVCGF LSLIGIESGATHTEVKVVRSGIHIIESHNRVGGDNIPELVYHATGVDLYSLAIQDASGLPLDNTRKPVSNNSGILFFDFE PGQVSSLCGEQRVKLLPFVKDVSLPELINAPLSRPVDSFSRNGYVICSTPEDVKSKLELCQTLIKPIYI >Mature_388_residues GSKIGFIGSGKLLLDRAKSFGLYVVLIQKQSLASMEAIALADSVLLCDYDAADNKKIILDFLREQGIEKVLTLSEKALPA AAWINDELSHDTKNSTTAEIVKNKILMRDTLKGTPYGNVNYHAVRSANDLSQAAALLGFPFILKPSRGVGSENVHLVVDD KQLPTINVQQTLIAEQYIGGKEYSIEAYSVNGVHTVHAVTEKSLFDNEDSRFVEHGHVVSRENNDGPFFAAIDDFVCGFL SLIGIESGATHTEVKVVRSGIHIIESHNRVGGDNIPELVYHATGVDLYSLAIQDASGLPLDNTRKPVSNNSGILFFDFEP GQVSSLCGEQRVKLLPFVKDVSLPELINAPLSRPVDSFSRNGYVICSTPEDVKSKLELCQTLIKPIYI
Specific function: Unknown
COG id: COG0439
COG function: function code I; Biotin carboxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR005479 [H]
Pfam domain/function: PF02786 CPSase_L_D2 [H]
EC number: NA
Molecular weight: Translated: 42471; Mature: 42340
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSKIGFIGSGKLLLDRAKSFGLYVVLIQKQSLASMEAIALADSVLLCDYDAADNKKIIL CCCCEEEEECCHHHEEHHCCCCEEEEEEECCCHHHHHHHHHHCEEEEEECCCCCCCHHHH DFLREQGIEKVLTLSEKALPAAAWINDELSHDTKNSTTAEIVKNKILMRDTLKGTPYGNV HHHHHHCHHHHHHHHHHCCCHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC NYHAVRSANDLSQAAALLGFPFILKPSRGVGSENVHLVVDDKQLPTINVQQTLIAEQYIG CEEEECCCHHHHHHHHHHCCCEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCC GKEYSIEAYSVNGVHTVHAVTEKSLFDNEDSRFVEHGHVVSRENNDGPFFAAIDDFVCGF CCEEEEEEEEECCEEEEEHHHHHHHCCCCCCHHHHCCCEEECCCCCCCEEEHHHHHHHHH LSLIGIESGATHTEVKVVRSGIHIIESHNRVGGDNIPELVYHATGVDLYSLAIQDASGLP HHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCC LDNTRKPVSNNSGILFFDFEPGQVSSLCGEQRVKLLPFVKDVSLPELINAPLSRPVDSFS CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHC RNGYVICSTPEDVKSKLELCQTLIKPIYI CCCEEEECCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GSKIGFIGSGKLLLDRAKSFGLYVVLIQKQSLASMEAIALADSVLLCDYDAADNKKIIL CCCEEEEECCHHHEEHHCCCCEEEEEEECCCHHHHHHHHHHCEEEEEECCCCCCCHHHH DFLREQGIEKVLTLSEKALPAAAWINDELSHDTKNSTTAEIVKNKILMRDTLKGTPYGNV HHHHHHCHHHHHHHHHHCCCHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC NYHAVRSANDLSQAAALLGFPFILKPSRGVGSENVHLVVDDKQLPTINVQQTLIAEQYIG CEEEECCCHHHHHHHHHHCCCEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCC GKEYSIEAYSVNGVHTVHAVTEKSLFDNEDSRFVEHGHVVSRENNDGPFFAAIDDFVCGF CCEEEEEEEEECCEEEEEHHHHHHHCCCCCCHHHHCCCEEECCCCCCCEEEHHHHHHHHH LSLIGIESGATHTEVKVVRSGIHIIESHNRVGGDNIPELVYHATGVDLYSLAIQDASGLP HHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCC LDNTRKPVSNNSGILFFDFEPGQVSSLCGEQRVKLLPFVKDVSLPELINAPLSRPVDSFS CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHC RNGYVICSTPEDVKSKLELCQTLIKPIYI CCCEEEECCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]