| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is aspB [H]
Identifier: 157372301
GI number: 157372301
Start: 4507307
End: 4508680
Strand: Direct
Name: aspB [H]
Synonym: Spro_4067
Alternate gene names: 157372301
Gene position: 4507307-4508680 (Clockwise)
Preceding gene: 157372300
Following gene: 157372302
Centisome position: 82.72
GC content: 45.92
Gene sequence:
>1374_bases ATGTCTAACCTTCTCTTCCACGCATACAAAAATGCGCGTAACGTCCTGTCCGGAAACGATGAAACTGGTATGAAAGTCTT TCCGGGGATGTTTGACAGCGATGTCGTTTCCCTCTCTCACGGCGACGGCACAAGACGACCGCAGTGCGGCATTATTTCCG CGGGGGTTTTAGCGTTGCTTGATGATCGTTACTCCCCTGATGACTACCATGTGATGACGCATAATGCAGAGTTGGAAACC TGGATCATCGATGATTTCAAGGCGGATGGGATACATGAGAGTCTCGCCAACAATATTGTGCTGTCACACGGTTCGACCAG TCTCTTCGATGCCATATTTACTTATTATATCGGGAAAGGACGTCGTTATTTGGTGCCCTCCTCGTTCTATCACAACCTGA TAAAGTGGTCAGCGTTATATCACGAGCAACTTACGTGCCAGTATACGAAGATTGAAAATGATTACAAACTGACAGCGGAA GAACTGTCTAAATCGGTATCAGAAAAAGAAATTGATACACTGTTCTTGTTTAATCCTACGCAAACCGGTGCGATTTATAC AGACGCTGAGCTCATGGCACTGTCTAAAGTGTGTATTGAATTTAATATAACGGTTTTTGTAGACAGTGTATTTTCTGGTA CGGAATTTAACGATGAGGAGAGGACTCCTCAGATGGCAAAATATTTTACGCAGTATCCTGACAATATCGTAACGATTAAA AGTGCGTCCAAATTTTTAAATCTGGCCAATGTCAGGGTGGGCTGGGCATGTGGTGGGGAGAATATTATCGCAGCGCTGCG TGATATCTGTTCGGCGAAAAACCCGTCGATCTCAAATGTGGCACTGGAAATGGTCAAGTATGGTGTTCTACACTGTCATG AATATATCAGAGAAAACAATCTGGAAAGTGCACAGCGTGCACGCATTATTGATGCGTCTGTCTATGACATCAATAATTCT CTGGGGGAACAGGTGATAAACACCACGCATAAACCGGCCGCTGGGCACGGATTTTTGCTCGATTTCGACTATTTGATCAA GGCGACGCGTGGGCGTATAAAATCAGGCTGCGATCTGGTTGCGTATTTGCTTAAAGAACAGAAATTGTCCCTGTCCCCTG CAGATTCTCTTGGTTTCACCGGGTGTAAAGTGAGAGTTGCTTTCTCATCCGTCGGGCTCAAGTCGACCTACCTGGATAGC GAATACGAGCGCAACGTGGCAATGGACAGCATCACTATTGGCCACGTGCCAGTGACCGCATTGAGTATCCCTCGCAGACA GCATACCGATTATTTTGATGCAGGCCGAGGTATTCTGGACCATTCGCTGAGAAATCCCTTGCGTACTGCGTTAGCTAACC TACTGAAAAAATAG
Upstream 100 bases:
>100_bases AATGCCCTGATGGGATTTGGGCTCGGGGGATACCATATTTCTGAGGTCGGTGAGGTGTCCGCTGAGTTGGTACAGCGCTA TCAAGCGTTGAGGAGTAAAC
Downstream 100 bases:
>100_bases GAGATAGATATGTCAGTTATTGCTGTTCTTGAGTCAAACCTGGCGGGCAATGGTGCCTTAGTCATTCAGGCGGCCAAACT AAAGGGCTATAAAACGCTTT
Product: class I and II aminotransferase
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MSNLLFHAYKNARNVLSGNDETGMKVFPGMFDSDVVSLSHGDGTRRPQCGIISAGVLALLDDRYSPDDYHVMTHNAELET WIIDDFKADGIHESLANNIVLSHGSTSLFDAIFTYYIGKGRRYLVPSSFYHNLIKWSALYHEQLTCQYTKIENDYKLTAE ELSKSVSEKEIDTLFLFNPTQTGAIYTDAELMALSKVCIEFNITVFVDSVFSGTEFNDEERTPQMAKYFTQYPDNIVTIK SASKFLNLANVRVGWACGGENIIAALRDICSAKNPSISNVALEMVKYGVLHCHEYIRENNLESAQRARIIDASVYDINNS LGEQVINTTHKPAAGHGFLLDFDYLIKATRGRIKSGCDLVAYLLKEQKLSLSPADSLGFTGCKVRVAFSSVGLKSTYLDS EYERNVAMDSITIGHVPVTALSIPRRQHTDYFDAGRGILDHSLRNPLRTALANLLKK
Sequences:
>Translated_457_residues MSNLLFHAYKNARNVLSGNDETGMKVFPGMFDSDVVSLSHGDGTRRPQCGIISAGVLALLDDRYSPDDYHVMTHNAELET WIIDDFKADGIHESLANNIVLSHGSTSLFDAIFTYYIGKGRRYLVPSSFYHNLIKWSALYHEQLTCQYTKIENDYKLTAE ELSKSVSEKEIDTLFLFNPTQTGAIYTDAELMALSKVCIEFNITVFVDSVFSGTEFNDEERTPQMAKYFTQYPDNIVTIK SASKFLNLANVRVGWACGGENIIAALRDICSAKNPSISNVALEMVKYGVLHCHEYIRENNLESAQRARIIDASVYDINNS LGEQVINTTHKPAAGHGFLLDFDYLIKATRGRIKSGCDLVAYLLKEQKLSLSPADSLGFTGCKVRVAFSSVGLKSTYLDS EYERNVAMDSITIGHVPVTALSIPRRQHTDYFDAGRGILDHSLRNPLRTALANLLKK >Mature_456_residues SNLLFHAYKNARNVLSGNDETGMKVFPGMFDSDVVSLSHGDGTRRPQCGIISAGVLALLDDRYSPDDYHVMTHNAELETW IIDDFKADGIHESLANNIVLSHGSTSLFDAIFTYYIGKGRRYLVPSSFYHNLIKWSALYHEQLTCQYTKIENDYKLTAEE LSKSVSEKEIDTLFLFNPTQTGAIYTDAELMALSKVCIEFNITVFVDSVFSGTEFNDEERTPQMAKYFTQYPDNIVTIKS ASKFLNLANVRVGWACGGENIIAALRDICSAKNPSISNVALEMVKYGVLHCHEYIRENNLESAQRARIIDASVYDINNSL GEQVINTTHKPAAGHGFLLDFDYLIKATRGRIKSGCDLVAYLLKEQKLSLSPADSLGFTGCKVRVAFSSVGLKSTYLDSE YERNVAMDSITIGHVPVTALSIPRRQHTDYFDAGRGILDHSLRNPLRTALANLLKK
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 50997; Mature: 50866
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLLFHAYKNARNVLSGNDETGMKVFPGMFDSDVVSLSHGDGTRRPQCGIISAGVLALL CCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH DDRYSPDDYHVMTHNAELETWIIDDFKADGIHESLANNIVLSHGSTSLFDAIFTYYIGKG CCCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHCCEEEECCCHHHHHHHHHHHHCCC RRYLVPSSFYHNLIKWSALYHEQLTCQYTKIENDYKLTAEELSKSVSEKEIDTLFLFNPT CEEECCCHHHHHHHHHHHHHHHHHEEEEEEECCCCEECHHHHHHHHHHHCCCEEEEECCC QTGAIYTDAELMALSKVCIEFNITVFVDSVFSGTEFNDEERTPQMAKYFTQYPDNIVTIK CCCCEEECHHHHHHHHHHHEEEEEEEEECHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEE SASKFLNLANVRVGWACGGENIIAALRDICSAKNPSISNVALEMVKYGVLHCHEYIRENN CHHHHHHHHCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC LESAQRARIIDASVYDINNSLGEQVINTTHKPAAGHGFLLDFDYLIKATRGRIKSGCDLV CCHHHHHHEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHH AYLLKEQKLSLSPADSLGFTGCKVRVAFSSVGLKSTYLDSEYERNVAMDSITIGHVPVTA HHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCHHHCCCHHHCCCEECEEEECCCCEEE LSIPRRQHTDYFDAGRGILDHSLRNPLRTALANLLKK EECCCHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNLLFHAYKNARNVLSGNDETGMKVFPGMFDSDVVSLSHGDGTRRPQCGIISAGVLALL CCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH DDRYSPDDYHVMTHNAELETWIIDDFKADGIHESLANNIVLSHGSTSLFDAIFTYYIGKG CCCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHCCEEEECCCHHHHHHHHHHHHCCC RRYLVPSSFYHNLIKWSALYHEQLTCQYTKIENDYKLTAEELSKSVSEKEIDTLFLFNPT CEEECCCHHHHHHHHHHHHHHHHHEEEEEEECCCCEECHHHHHHHHHHHCCCEEEEECCC QTGAIYTDAELMALSKVCIEFNITVFVDSVFSGTEFNDEERTPQMAKYFTQYPDNIVTIK CCCCEEECHHHHHHHHHHHEEEEEEEEECHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEE SASKFLNLANVRVGWACGGENIIAALRDICSAKNPSISNVALEMVKYGVLHCHEYIRENN CHHHHHHHHCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC LESAQRARIIDASVYDINNSLGEQVINTTHKPAAGHGFLLDFDYLIKATRGRIKSGCDLV CCHHHHHHEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHH AYLLKEQKLSLSPADSLGFTGCKVRVAFSSVGLKSTYLDSEYERNVAMDSITIGHVPVTA HHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCHHHCCCHHHCCCEECEEEECCCCEEE LSIPRRQHTDYFDAGRGILDHSLRNPLRTALANLLKK EECCCHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]