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The map label for this gene is samB [H]

Identifier: 157372298

GI number: 157372298

Start: 4504695

End: 4505105

Strand: Reverse

Name: samB [H]

Synonym: Spro_4064

Alternate gene names: 157372298

Gene position: 4505105-4504695 (Counterclockwise)

Preceding gene: 157372305

Following gene: 157372297

Centisome position: 82.68

GC content: 52.55

Gene sequence:

>411_bases
ATGCACCAGGCGGTATGCCAGTACGTAGAGCACGCTGCCGAGAAACTTCGTGGTGAGCGGCAGTATTGCCGGCACATTAC
GGTCTTTTTGCGAACCAGCCCGTTTGCCTCTAACGATCCTTATTACGCGAACAGCAACAGCGTGCAGCTCATGCTGGCCA
CTCAGGATAAATGTGATGTCGTGGCAGTGGCAGGGGCAGTGAAGACGCACGAAGCCACCTGGCGTGACGGATATCGCTAC
CAGAGAGCGGGAATCATGTTGAACGATTTCTGTGACATAAATCACTCTGGGCTGGGCAATGTTTGGTTTGCTGGCCAAGG
GATAAATAAAGCCTGGGCAATGCGTCGCGAACTCCTTTCCCCGTCTTACATAACACGACTGAGCGATATCCCGAACGCCA
GATTAATATAA

Upstream 100 bases:

>100_bases
CATGATTCATAAGGATTCTTGGTGATATATGCATTTTAAGCACCTACCAAGCTGCATCGTCAGCCGTTCGTTTGGTCAGC
GCGTCGCGTAGCTGCAGGAA

Downstream 100 bases:

>100_bases
CCCCAATCAGCCAGATATTCAGTCAGACATGCTTAAGAAGACATAAACGGCTACGGGTAGCATAACCAGGATCACGATCT
CAATTAACACAAACTTCATG

Product: UV protection protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MHQAVCQYVEHAAEKLRGERQYCRHITVFLRTSPFASNDPYYANSNSVQLMLATQDKCDVVAVAGAVKTHEATWRDGYRY
QRAGIMLNDFCDINHSGLGNVWFAGQGINKAWAMRRELLSPSYITRLSDIPNARLI

Sequences:

>Translated_136_residues
MHQAVCQYVEHAAEKLRGERQYCRHITVFLRTSPFASNDPYYANSNSVQLMLATQDKCDVVAVAGAVKTHEATWRDGYRY
QRAGIMLNDFCDINHSGLGNVWFAGQGINKAWAMRRELLSPSYITRLSDIPNARLI
>Mature_136_residues
MHQAVCQYVEHAAEKLRGERQYCRHITVFLRTSPFASNDPYYANSNSVQLMLATQDKCDVVAVAGAVKTHEATWRDGYRY
QRAGIMLNDFCDINHSGLGNVWFAGQGINKAWAMRRELLSPSYITRLSDIPNARLI

Specific function: Involved in UV protection and mutation [H]

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 umuC domain [H]

Homologues:

Organism=Escherichia coli, GI1787432, Length=158, Percent_Identity=44.3037974683544, Blast_Score=137, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017961
- InterPro:   IPR001126
- InterPro:   IPR017963 [H]

Pfam domain/function: PF00817 IMS [H]

EC number: NA

Molecular weight: Translated: 15453; Mature: 15453

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQAVCQYVEHAAEKLRGERQYCRHITVFLRTSPFASNDPYYANSNSVQLMLATQDKCDV
CCHHHHHHHHHHHHHHHCHHHHHHHEEEEEECCCCCCCCCEEECCCCEEEEEEECCCCCE
VAVAGAVKTHEATWRDGYRYQRAGIMLNDFCDINHSGLGNVWFAGQGINKAWAMRRELLS
EEECCCHHCCCCCCCCCCEEHCCCEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHCC
PSYITRLSDIPNARLI
HHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHQAVCQYVEHAAEKLRGERQYCRHITVFLRTSPFASNDPYYANSNSVQLMLATQDKCDV
CCHHHHHHHHHHHHHHHCHHHHHHHEEEEEECCCCCCCCCEEECCCCEEEEEEECCCCCE
VAVAGAVKTHEATWRDGYRYQRAGIMLNDFCDINHSGLGNVWFAGQGINKAWAMRRELLS
EEECCCHHCCCCCCCCCCEEHCCCEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHCC
PSYITRLSDIPNARLI
HHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1991707 [H]