| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is 157372296
Identifier: 157372296
GI number: 157372296
Start: 4501784
End: 4502683
Strand: Reverse
Name: 157372296
Synonym: Spro_4062
Alternate gene names: NA
Gene position: 4502683-4501784 (Counterclockwise)
Preceding gene: 157372297
Following gene: 157372295
Centisome position: 82.64
GC content: 43.0
Gene sequence:
>900_bases ATGTCCAAATTCGGTAAACAGTTAGGTAAACAACTTGTCACGCTTGCTCGTCAGGGACGAGGGAGTTTTAAAACCGTTGC TGACCGTTCCAGAATTGCAGATCGTTTTTCAGAACGTTTGGCAAAGTTAAATATTCAAATTCGAGATGTAAAACACATCA AAACGACTCATATCGAAAAATACATCCATAGCCGGCAGGCTGAAAATCTATCGCTTCGAACACTGCAAAATGAGATGGCA GCCGTGCGTTCAATTATGGCAACTGCGGGCCGGAATAAACTGGCTGATCCCCATCATGATAAACTGAGTAACCAGGCTTT AGGAATTTCAGGCGCTAACCGTGATGGGACGAAAGCACCTATTTCGGATGAGAAGTTAAATACTGTCATAAATTATACCT TCAAAAAAGATGCGGGGGTAGCATTGGGGGTTCAGTTATCGCGCTATTTAGGTTTGCGAACTGAGGAAACTGTTCAGTCA GCAAAGTCATTAAAAACATGGCGGCAGACTTTAATTAATGGCGACGAGCGTGTTCGGGTCGTTTTTGGCACGAAAGGTGG TCGCCCTCGTGATACGACGATTTTTAATCGCGAGAAAGTTTTATCTATTTTAGAGGCGGCAATAAAGTATTGTGATGTTC ATAATGGTAAATTGATTGATAAGCCTTCATTGCATACAGCAATAGAACGGTACAGAAATATTGTCCGTGAGGCTGGAATG ACAGGGAAAGATGCTCCCCATAGTTTGCGTTACGCGTATTCACGCGATGCGATTACTCATCATGTTAAAAATGGAATGAG TCGCGTAGAAGCGGAGGCATTGGTATCGATGGATTTGGGCCATGGGGATGGGCGAGGCCGTTATATTAAACAAGTCTATT TTAAAGGCGATGTTGAATAA
Upstream 100 bases:
>100_bases GCGCAAAAGCAACCGTGTCGTCGGGGTTGAAATTACTGGGGTACAGATCCGTCTGCTTCTTTTAAAGCAGAGGGACGTGT ATCCCATTGGAGATATTGAC
Downstream 100 bases:
>100_bases CGAATTAATCGCTTTAAATGTACGAGATTTTATTAATTTAAAAAATTTTCGACTGCATGCGTGAATATGATGGTTCGTAC ATAACGGTCGCAGCTCTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Integrase
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSKFGKQLGKQLVTLARQGRGSFKTVADRSRIADRFSERLAKLNIQIRDVKHIKTTHIEKYIHSRQAENLSLRTLQNEMA AVRSIMATAGRNKLADPHHDKLSNQALGISGANRDGTKAPISDEKLNTVINYTFKKDAGVALGVQLSRYLGLRTEETVQS AKSLKTWRQTLINGDERVRVVFGTKGGRPRDTTIFNREKVLSILEAAIKYCDVHNGKLIDKPSLHTAIERYRNIVREAGM TGKDAPHSLRYAYSRDAITHHVKNGMSRVEAEALVSMDLGHGDGRGRYIKQVYFKGDVE
Sequences:
>Translated_299_residues MSKFGKQLGKQLVTLARQGRGSFKTVADRSRIADRFSERLAKLNIQIRDVKHIKTTHIEKYIHSRQAENLSLRTLQNEMA AVRSIMATAGRNKLADPHHDKLSNQALGISGANRDGTKAPISDEKLNTVINYTFKKDAGVALGVQLSRYLGLRTEETVQS AKSLKTWRQTLINGDERVRVVFGTKGGRPRDTTIFNREKVLSILEAAIKYCDVHNGKLIDKPSLHTAIERYRNIVREAGM TGKDAPHSLRYAYSRDAITHHVKNGMSRVEAEALVSMDLGHGDGRGRYIKQVYFKGDVE >Mature_298_residues SKFGKQLGKQLVTLARQGRGSFKTVADRSRIADRFSERLAKLNIQIRDVKHIKTTHIEKYIHSRQAENLSLRTLQNEMAA VRSIMATAGRNKLADPHHDKLSNQALGISGANRDGTKAPISDEKLNTVINYTFKKDAGVALGVQLSRYLGLRTEETVQSA KSLKTWRQTLINGDERVRVVFGTKGGRPRDTTIFNREKVLSILEAAIKYCDVHNGKLIDKPSLHTAIERYRNIVREAGMT GKDAPHSLRYAYSRDAITHHVKNGMSRVEAEALVSMDLGHGDGRGRYIKQVYFKGDVE
Specific function: Unknown
COG id: COG0582
COG function: function code L; Integrase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33536; Mature: 33405
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFGKQLGKQLVTLARQGRGSFKTVADRSRIADRFSERLAKLNIQIRDVKHIKTTHIEK CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHH YIHSRQAENLSLRTLQNEMAAVRSIMATAGRNKLADPHHDKLSNQALGISGANRDGTKAP HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEECCCCCCCCCCCCC ISDEKLNTVINYTFKKDAGVALGVQLSRYLGLRTEETVQSAKSLKTWRQTLINGDERVRV CCHHHHHHHHEEEECCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE VFGTKGGRPRDTTIFNREKVLSILEAAIKYCDVHNGKLIDKPSLHTAIERYRNIVREAGM EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC TGKDAPHSLRYAYSRDAITHHVKNGMSRVEAEALVSMDLGHGDGRGRYIKQVYFKGDVE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHEEECCCCC >Mature Secondary Structure SKFGKQLGKQLVTLARQGRGSFKTVADRSRIADRFSERLAKLNIQIRDVKHIKTTHIEK CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHH YIHSRQAENLSLRTLQNEMAAVRSIMATAGRNKLADPHHDKLSNQALGISGANRDGTKAP HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEECCCCCCCCCCCCC ISDEKLNTVINYTFKKDAGVALGVQLSRYLGLRTEETVQSAKSLKTWRQTLINGDERVRV CCHHHHHHHHEEEECCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE VFGTKGGRPRDTTIFNREKVLSILEAAIKYCDVHNGKLIDKPSLHTAIERYRNIVREAGM EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC TGKDAPHSLRYAYSRDAITHHVKNGMSRVEAEALVSMDLGHGDGRGRYIKQVYFKGDVE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA