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The map label for this gene is yggU [C]

Identifier: 157372267

GI number: 157372267

Start: 4473883

End: 4474173

Strand: Direct

Name: yggU [C]

Synonym: Spro_4033

Alternate gene names: 157372267

Gene position: 4473883-4474173 (Clockwise)

Preceding gene: 157372266

Following gene: 157372268

Centisome position: 82.11

GC content: 56.01

Gene sequence:

>291_bases
GTGAGTGCAGTAACCCCGGTGCTGGACGGGCTGGCGATCAGGCTATATATTCAGCCGAAAGCCAGCCGCGACCAGATTGT
CGGTTTGCATGGCGACGAACTTAAAGTCGCCATTACCGCCCCGCCGGTAGACGGCCAGGCCAACGCTCATCTGATCAAGT
TTCTCGCCAAACAGTTCAAAGTGGCGAAAGGCAACGTCACCATCGAGAAAGGCGAACTGGGGCGGCATAAACAGTTACGC
ATCGTTAATCCGCAACAGATCCCCGACGTGGTCGCGGCGCTAATCGAATAA

Upstream 100 bases:

>100_bases
CGATGGGCGGCATTGATTTTTCGGCGATGGTGGTGATCCTTATCTTGTATCTGATCAACTACCTGGGCATGGATCTGTTC
GGTGAGATCTGGTTCCTGCT

Downstream 100 bases:

>100_bases
ATTTCAAGGTAGTCATCATGCAAAAAGTCGTTCTTGCCACCGGTAACCCGGGCAAAGTGCGCGAACTCGCCGACCTGCTG
GCCGATTTCGGGCTGAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSAVTPVLDGLAIRLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANAHLIKFLAKQFKVAKGNVTIEKGELGRHKQLR
IVNPQQIPDVVAALIE

Sequences:

>Translated_96_residues
MSAVTPVLDGLAIRLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANAHLIKFLAKQFKVAKGNVTIEKGELGRHKQLR
IVNPQQIPDVVAALIE
>Mature_95_residues
SAVTPVLDGLAIRLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANAHLIKFLAKQFKVAKGNVTIEKGELGRHKQLRI
VNPQQIPDVVAALIE

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

Organism=Escherichia coli, GI87082189, Length=96, Percent_Identity=77.0833333333333, Blast_Score=153, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4033_SERP5 (A8GJ38)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001480256.1
- ProteinModelPortal:   A8GJ38
- SMR:   A8GJ38
- STRING:   A8GJ38
- GeneID:   5605554
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_4033
- eggNOG:   COG1872
- HOGENOM:   HBG472132
- OMA:   KASRDKI
- ProtClustDB:   PRK05090
- BioCyc:   SPRO399741:SPRO_4033-MONOMER
- HAMAP:   MF_00634
- InterPro:   IPR005228
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10
- TIGRFAMs:   TIGR00251

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 10382; Mature: 10251

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVTPVLDGLAIRLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANAHLIKFLAKQFK
CCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHE
VAKGNVTIEKGELGRHKQLRIVNPQQIPDVVAALIE
ECCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHCC
>Mature Secondary Structure 
SAVTPVLDGLAIRLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANAHLIKFLAKQFK
CCCCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHE
VAKGNVTIEKGELGRHKQLRIVNPQQIPDVVAALIE
ECCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA