| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is panB [H]
Identifier: 157372225
GI number: 157372225
Start: 4426452
End: 4427312
Strand: Direct
Name: panB [H]
Synonym: Spro_3991
Alternate gene names: 157372225
Gene position: 4426452-4427312 (Clockwise)
Preceding gene: 157372222
Following gene: 157372226
Centisome position: 81.24
GC content: 57.96
Gene sequence:
>861_bases ATGACAGCACTTTTTTGCCGCCAGGGCCCTGCGTACACCGCGCGGCTCTATTCAGGAGACGACGTGATGAAACCCACCAC CGTGACCCATTTGCACCAGTGGAAGCAGGAACAGCGCAAGTTTGCTTCCCTCACCGCCTACGATGCCAGCTTTGCCAAAC TGTTTGAAGAGCAAGGCGTTAAAGTGCTGCTGGTGGGCGATTCACTGGGCATGACGCTGCAGGGCCACGAATCTACCCTA CCGGTCACCGTCGCCGATATCGCCTATCATACCCGTGCCGTGCGCCGGGGTGCACCGGCCTGTCTGCTGTTGGCCGACCT GCCCTTTATGAGCTATGCCACTCCACAGTTGGCCTGCGCCAATGCCGCCGAGCTGATGCAGGCCGGTGCCAATATGGTGA AACTGGAAGGCGGCAGTTGGCTGTGTGAAACGGTGAAAACACTCACCGAACGCGCGGTGCCGGTCTGCGGCCATCTCGGC CTGACACCGCAGTCAGTCAACGTATTCGGCGGCTACAAGGTGCAAGGCCGCGATGAACTTGCCGCCAAGCAACTGCTGGA AGATGCAAAAAATCTGGAGCTGGCCGGTATCCAACTACTGGTGCTGGAGTGCGTACCAACCGAACTGGCACGCAAGATCA CCGAAGCCCTGACCATTCCGGTGATCGGCATTGGTGCCGGTAACGCCACCGATGGACAGATCCTGGTGATGCACGACGCC TTCGGCATTACCGGTGGCCACACGCCAAAATTCGCTAAAAACTTCCTGGCACAGAGCGGCGATATCCGCTCGGCGGTGCA ACAATATATTCAAGACGTAGAGCAAGGCATTTACCCCGCTGAAGAGCACTCTTTCAACTAA
Upstream 100 bases:
>100_bases CGTCCTTTTTTAGCCATTGCCGCCCATTACACCACAAGGTTCTTAAGAACCGCTTAAGCATTATGATCTGCGCTACCCAC CCCGTTAGGGTTACAGTAGA
Downstream 100 bases:
>100_bases AGTGTCCGCGTTAGGAGTTATGGAATGGTAATTATCGAAACCCTGCCGCTGTTGCGTCAGCAGATCCGCCGCTGGCGTCA GGATGGGAAACGCATCGCGC
Product: 3-methyl-2-oxobutanoate hydroxymethyltransferase
Products: NA
Alternate protein names: Ketopantoate hydroxymethyltransferase; KPHMT [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTALFCRQGPAYTARLYSGDDVMKPTTVTHLHQWKQEQRKFASLTAYDASFAKLFEEQGVKVLLVGDSLGMTLQGHESTL PVTVADIAYHTRAVRRGAPACLLLADLPFMSYATPQLACANAAELMQAGANMVKLEGGSWLCETVKTLTERAVPVCGHLG LTPQSVNVFGGYKVQGRDELAAKQLLEDAKNLELAGIQLLVLECVPTELARKITEALTIPVIGIGAGNATDGQILVMHDA FGITGGHTPKFAKNFLAQSGDIRSAVQQYIQDVEQGIYPAEEHSFN
Sequences:
>Translated_286_residues MTALFCRQGPAYTARLYSGDDVMKPTTVTHLHQWKQEQRKFASLTAYDASFAKLFEEQGVKVLLVGDSLGMTLQGHESTL PVTVADIAYHTRAVRRGAPACLLLADLPFMSYATPQLACANAAELMQAGANMVKLEGGSWLCETVKTLTERAVPVCGHLG LTPQSVNVFGGYKVQGRDELAAKQLLEDAKNLELAGIQLLVLECVPTELARKITEALTIPVIGIGAGNATDGQILVMHDA FGITGGHTPKFAKNFLAQSGDIRSAVQQYIQDVEQGIYPAEEHSFN >Mature_285_residues TALFCRQGPAYTARLYSGDDVMKPTTVTHLHQWKQEQRKFASLTAYDASFAKLFEEQGVKVLLVGDSLGMTLQGHESTLP VTVADIAYHTRAVRRGAPACLLLADLPFMSYATPQLACANAAELMQAGANMVKLEGGSWLCETVKTLTERAVPVCGHLGL TPQSVNVFGGYKVQGRDELAAKQLLEDAKNLELAGIQLLVLECVPTELARKITEALTIPVIGIGAGNATDGQILVMHDAF GITGGHTPKFAKNFLAQSGDIRSAVQQYIQDVEQGIYPAEEHSFN
Specific function: Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate [H]
COG id: COG0413
COG function: function code H; Ketopantoate hydroxymethyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the panB family [H]
Homologues:
Organism=Escherichia coli, GI1786326, Length=264, Percent_Identity=76.1363636363636, Blast_Score=430, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6319653, Length=290, Percent_Identity=33.7931034482759, Blast_Score=166, Evalue=4e-42,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003700 - InterPro: IPR015813 [H]
Pfam domain/function: PF02548 Pantoate_transf [H]
EC number: =2.1.2.11 [H]
Molecular weight: Translated: 30862; Mature: 30731
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALFCRQGPAYTARLYSGDDVMKPTTVTHLHQWKQEQRKFASLTAYDASFAKLFEEQGV CCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KVLLVGDSLGMTLQGHESTLPVTVADIAYHTRAVRRGAPACLLLADLPFMSYATPQLACA EEEEEECCCCCEEECCCCCCCEEHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCHHHHC NAAELMQAGANMVKLEGGSWLCETVKTLTERAVPVCGHLGLTPQSVNVFGGYKVQGRDEL CHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCHHCCCCCCCCCEEEECCEEECCHHHH AAKQLLEDAKNLELAGIQLLVLECVPTELARKITEALTIPVIGIGAGNATDGQILVMHDA HHHHHHHHHHCCCHHHHEEEEEHHCCHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEEEC FGITGGHTPKFAKNFLAQSGDIRSAVQQYIQDVEQGIYPAEEHSFN CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TALFCRQGPAYTARLYSGDDVMKPTTVTHLHQWKQEQRKFASLTAYDASFAKLFEEQGV CEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KVLLVGDSLGMTLQGHESTLPVTVADIAYHTRAVRRGAPACLLLADLPFMSYATPQLACA EEEEEECCCCCEEECCCCCCCEEHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCHHHHC NAAELMQAGANMVKLEGGSWLCETVKTLTERAVPVCGHLGLTPQSVNVFGGYKVQGRDEL CHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCHHCCCCCCCCCEEEECCEEECCHHHH AAKQLLEDAKNLELAGIQLLVLECVPTELARKITEALTIPVIGIGAGNATDGQILVMHDA HHHHHHHHHHCCCHHHHEEEEEHHCCHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEEEC FGITGGHTPKFAKNFLAQSGDIRSAVQQYIQDVEQGIYPAEEHSFN CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA