| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is yaeH [C]
Identifier: 157372029
GI number: 157372029
Start: 4195591
End: 4195980
Strand: Direct
Name: yaeH [C]
Synonym: Spro_3794
Alternate gene names: 157372029
Gene position: 4195591-4195980 (Clockwise)
Preceding gene: 157372028
Following gene: 157372033
Centisome position: 77.0
GC content: 46.15
Gene sequence:
>390_bases ATGTATGACAACCTGAAAAGCTTAGGAATCAATCAACCGGAAGATGTCGATCGCTATAGCCTGCGTCAGGAGGCCAATAA CGACATTCTTAAGATTTATTTCCGCAAGGATAAAGGCGAATTCTTTGCCAAGAGCGTGAAATTCAAATATCCGCGCCAAC GCAAAACGGTCGTCGCTGACAATGCCGGCCAGGGTTACAAAGAAATCCACGAAATTAACCCGAACCTTCGCTACGTCATT GATGAATTGGATCAGCTATGCCAGCGCGATCAGGTGGAAGTCGATCTGAAACGCAAAATTCTTGATGACTTGCGTCATCT GGAAGGTGTGGTCTCCCACAAAATTGCCGAGATCGAATCCGATCTGGAAAAACTGACTCGCGGTAAGTAA
Upstream 100 bases:
>100_bases TTTTTTTATCTTCATTACGTGAGCAGTCACAGTCTCTGGCGCGGTTATTCGCCATAATCCCAGACCGTGGAATATAGTCT ATTTATAAGGTGGCGCTATT
Downstream 100 bases:
>100_bases GGGTTCAGCGCACTGAGACTACAGATTGTAGGGGCGCAGCATGCTGCGCCCGTATTAATCGGGGCGAATATATTCGCCCC TACAGGCGGCAGGTCATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MYDNLKSLGINQPEDVDRYSLRQEANNDILKIYFRKDKGEFFAKSVKFKYPRQRKTVVADNAGQGYKEIHEINPNLRYVI DELDQLCQRDQVEVDLKRKILDDLRHLEGVVSHKIAEIESDLEKLTRGK
Sequences:
>Translated_129_residues MYDNLKSLGINQPEDVDRYSLRQEANNDILKIYFRKDKGEFFAKSVKFKYPRQRKTVVADNAGQGYKEIHEINPNLRYVI DELDQLCQRDQVEVDLKRKILDDLRHLEGVVSHKIAEIESDLEKLTRGK >Mature_129_residues MYDNLKSLGINQPEDVDRYSLRQEANNDILKIYFRKDKGEFFAKSVKFKYPRQRKTVVADNAGQGYKEIHEINPNLRYVI DELDQLCQRDQVEVDLKRKILDDLRHLEGVVSHKIAEIESDLEKLTRGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0325 family
Homologues:
Organism=Escherichia coli, GI1786359, Length=127, Percent_Identity=85.0393700787402, Blast_Score=227, Evalue=2e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3794_SERP5 (A8GIF0)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001480018.1 - STRING: A8GIF0 - GeneID: 5607174 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_3794 - eggNOG: NOG05865 - HOGENOM: HBG298613 - OMA: NLRYVIE - ProtClustDB: PRK13677 - BioCyc: SPRO399741:SPRO_3794-MONOMER - HAMAP: MF_01519 - InterPro: IPR020911
Pfam domain/function: PF11944 DUF3461
EC number: NA
Molecular weight: Translated: 15208; Mature: 15208
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDNLKSLGINQPEDVDRYSLRQEANNDILKIYFRKDKGEFFAKSVKFKYPRQRKTVVAD CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCEEEEC NAGQGYKEIHEINPNLRYVIDELDQLCQRDQVEVDLKRKILDDLRHLEGVVSHKIAEIES CCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DLEKLTRGK HHHHHHCCC >Mature Secondary Structure MYDNLKSLGINQPEDVDRYSLRQEANNDILKIYFRKDKGEFFAKSVKFKYPRQRKTVVAD CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCEEEEC NAGQGYKEIHEINPNLRYVIDELDQLCQRDQVEVDLKRKILDDLRHLEGVVSHKIAEIES CCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DLEKLTRGK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA