Click here to switch to the map view.

The map label for this gene is ygaY [H]

Identifier: 157371973

GI number: 157371973

Start: 4127514

End: 4128713

Strand: Direct

Name: ygaY [H]

Synonym: Spro_3738

Alternate gene names: 157371973

Gene position: 4127514-4128713 (Clockwise)

Preceding gene: 157371971

Following gene: 157371974

Centisome position: 75.75

GC content: 61.83

Gene sequence:

>1200_bases
ATGAGCCAACAACATTCACAGCCGGGTCTCAGCCCGGCGCTGATCGTGCTGATCGCCATCGCCACCGGTCTGGCGGTCGC
CAGTAACTATTATGCCCAGCCGCTGCTGGAAACCATCGCCCAGAACTTCGATTTATCGGTCAATCAGGCCGGCTTTATCG
TCACTGCCGCCCAGTTGGGCTACGCCGTTGGCCTGCTGTTGCTGGTGCCACTCGGCGATATGTTTGAACGCCGCGGCCTG
ATCGTCTTTATGACGCTGCTGGCGGCGGGCGGCATGCTGATCACCGCCAGTTCCACGACCTTGCCGATGATGATCCTCGG
GACCGCGCTCACCGGGCTGTTCTCGGTGGTGGCGCAAATTCTGGTGCCACTGGCGGCCACCCTGGCCCATCCGGAAAAAC
GCGGCAAAACCGTCGGCATTATCATGAGCGGCCTGCTGCTCGGCATTCTGTTGGCGCGCACCGTAGCCGGAGCGCTGGCG
TCACTCGGCGGCTGGCGCACCATCTACTGGGTCGCCAGCGTGCTGATGATCCTGATGGCATTGATCCTGTGGCGCGCACT
GCCGCGTTACAAGCAGCATTCGGGGCTGAATTACCCGCAGTTGCTGAAATCGATCTTCACCCTGTTTTGTGGTACTCCGC
TGCTGCGTACCCGCGCGATACTCGGGGCGCTGTCGTTCGCCAACTTCAGCGTGCTGTGGACTTCGATGGCCTTTTTACTG
GCGGCTCCGCCGTTTGGTTATTCCGAAGGGGTGATTGGTCTGTTTGGCCTGGTCGGCGCTGCCGGCGCATTGGCGGCTTC
ACGCGCCGGGCATTTGGCGGATCAGGGTAAGGCCGGTTTAACCACCAGCGTGGGCCTGGTCCTGCTGCTGCTTTCCTGGA
TACCCATCGCTTTCGCTAAACAATCCCTGTGGGCGTTGATCGCCGGTATCCTGATCCTCGACCTGGCCGTGCAGGCCGTA
CACGTCACTAACCAGAGCGTGATTTACCGCATTATGCCGGAAGCGCGCAACCGCCTGACCGCCGGCTACATGACCAGCTA
TTTCATCGGGGGGGCACTCGGCTCACTGCTGTCTGCCTCGGCCTATCAACATGCGGGTTGGACCGGCGTTGCCGTGGCCG
GGGGCGTTTTGTGCCTGCTCAACCTGCTGACCTGGTGGCGCGGCAAGCACCACGATCCGCAAGGACCGGCGACAATCTGA

Upstream 100 bases:

>100_bases
TCTATCGCAAAATGAGATTGATCAAATGAAAATTATACATTGGATTCGCCGGCTGTCGTGCCCGATACTTCGGCTAACTT
TTCCCTGTGATTAATATCTT

Downstream 100 bases:

>100_bases
TTAGCAAGCGAATAGTCATATCGGGAATTTATTAGCGCCGCAGGGTATAAACATTACTCACTCTCTGGTAATGTTCTGCA
GATGAACTATTGATCTCTAT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSQQHSQPGLSPALIVLIAIATGLAVASNYYAQPLLETIAQNFDLSVNQAGFIVTAAQLGYAVGLLLLVPLGDMFERRGL
IVFMTLLAAGGMLITASSTTLPMMILGTALTGLFSVVAQILVPLAATLAHPEKRGKTVGIIMSGLLLGILLARTVAGALA
SLGGWRTIYWVASVLMILMALILWRALPRYKQHSGLNYPQLLKSIFTLFCGTPLLRTRAILGALSFANFSVLWTSMAFLL
AAPPFGYSEGVIGLFGLVGAAGALAASRAGHLADQGKAGLTTSVGLVLLLLSWIPIAFAKQSLWALIAGILILDLAVQAV
HVTNQSVIYRIMPEARNRLTAGYMTSYFIGGALGSLLSASAYQHAGWTGVAVAGGVLCLLNLLTWWRGKHHDPQGPATI

Sequences:

>Translated_399_residues
MSQQHSQPGLSPALIVLIAIATGLAVASNYYAQPLLETIAQNFDLSVNQAGFIVTAAQLGYAVGLLLLVPLGDMFERRGL
IVFMTLLAAGGMLITASSTTLPMMILGTALTGLFSVVAQILVPLAATLAHPEKRGKTVGIIMSGLLLGILLARTVAGALA
SLGGWRTIYWVASVLMILMALILWRALPRYKQHSGLNYPQLLKSIFTLFCGTPLLRTRAILGALSFANFSVLWTSMAFLL
AAPPFGYSEGVIGLFGLVGAAGALAASRAGHLADQGKAGLTTSVGLVLLLLSWIPIAFAKQSLWALIAGILILDLAVQAV
HVTNQSVIYRIMPEARNRLTAGYMTSYFIGGALGSLLSASAYQHAGWTGVAVAGGVLCLLNLLTWWRGKHHDPQGPATI
>Mature_398_residues
SQQHSQPGLSPALIVLIAIATGLAVASNYYAQPLLETIAQNFDLSVNQAGFIVTAAQLGYAVGLLLLVPLGDMFERRGLI
VFMTLLAAGGMLITASSTTLPMMILGTALTGLFSVVAQILVPLAATLAHPEKRGKTVGIIMSGLLLGILLARTVAGALAS
LGGWRTIYWVASVLMILMALILWRALPRYKQHSGLNYPQLLKSIFTLFCGTPLLRTRAILGALSFANFSVLWTSMAFLLA
APPFGYSEGVIGLFGLVGAAGALAASRAGHLADQGKAGLTTSVGLVLLLLSWIPIAFAKQSLWALIAGILILDLAVQAVH
VTNQSVIYRIMPEARNRLTAGYMTSYFIGGALGSLLSASAYQHAGWTGVAVAGGVLCLLNLLTWWRGKHHDPQGPATI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=350, Percent_Identity=26, Blast_Score=91, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42014; Mature: 41882

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQHSQPGLSPALIVLIAIATGLAVASNYYAQPLLETIAQNFDLSVNQAGFIVTAAQLG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
YAVGLLLLVPLGDMFERRGLIVFMTLLAAGGMLITASSTTLPMMILGTALTGLFSVVAQI
HHHHHHHHHCCHHHHHHCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LVPLAATLAHPEKRGKTVGIIMSGLLLGILLARTVAGALASLGGWRTIYWVASVLMILMA
HHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LILWRALPRYKQHSGLNYPQLLKSIFTLFCGTPLLRTRAILGALSFANFSVLWTSMAFLL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAPPFGYSEGVIGLFGLVGAAGALAASRAGHLADQGKAGLTTSVGLVLLLLSWIPIAFAK
HCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QSLWALIAGILILDLAVQAVHVTNQSVIYRIMPEARNRLTAGYMTSYFIGGALGSLLSAS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYQHAGWTGVAVAGGVLCLLNLLTWWRGKHHDPQGPATI
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SQQHSQPGLSPALIVLIAIATGLAVASNYYAQPLLETIAQNFDLSVNQAGFIVTAAQLG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
YAVGLLLLVPLGDMFERRGLIVFMTLLAAGGMLITASSTTLPMMILGTALTGLFSVVAQI
HHHHHHHHHCCHHHHHHCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LVPLAATLAHPEKRGKTVGIIMSGLLLGILLARTVAGALASLGGWRTIYWVASVLMILMA
HHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LILWRALPRYKQHSGLNYPQLLKSIFTLFCGTPLLRTRAILGALSFANFSVLWTSMAFLL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAPPFGYSEGVIGLFGLVGAAGALAASRAGHLADQGKAGLTTSVGLVLLLLSWIPIAFAK
HCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QSLWALIAGILILDLAVQAVHVTNQSVIYRIMPEARNRLTAGYMTSYFIGGALGSLLSAS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYQHAGWTGVAVAGGVLCLLNLLTWWRGKHHDPQGPATI
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]