| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157371926
Identifier: 157371926
GI number: 157371926
Start: 4082726
End: 4084075
Strand: Direct
Name: 157371926
Synonym: Spro_3691
Alternate gene names: NA
Gene position: 4082726-4084075 (Clockwise)
Preceding gene: 157371925
Following gene: 157371927
Centisome position: 74.93
GC content: 45.56
Gene sequence:
>1350_bases ATGGAAACTTTAACCCTGCAAGCGTTCCTCAACAATCAGTGGATTGATGTCGCCAATATTGCTTTCCCTGATGCCGAGCA ACAATCATACAAAATCACCGAATTGCACTATCACACTGACTTTGCGATAGATTATTTAGATCGGGATGATAACCACGCCG TCTCAATCAACCATCCTGTCTCCCTGTTCTTTGAGGACGAAGGCCCACGCGGCTGGATGAAATTTCTGGACGACATCGTG CCCAACGGGTCAAGCCGCCGCTATTGGTTAAAGTATCTCGATATTGATGAGCTTACCCCTGGCCAGCAGAACTTTGTGCT GCTCAAGTATGGCACCATGTCACCCGTCGGGAATTTGCGCATCAAAGAATCTTTAGCCGAGGCTAATCCTCTAGCCGACA GACTGTTTTTTAGCATTGAGGATGTCAAAAACAGAGCCGGCGACTTTCTCGATTACGCTCAACAACGTGGTGCCGCCGCA GGCGGGGCGACAGGTGCGGGCGGAGAAGCACCAAAGTTATTATTGCGATGCAGCCATGATGAGCGGATTTGGATTGATAC CTTCCAAAATGACCTGACCAACCGGGATATACCCTATTTGGTAAAATATCCGCGCGGTCAAAAAACTGAAATTGACTGCA ACATCGTCAGAGCTGAATTTCATTATTACCATGAGCTGGAAGCCATGGGGTTTAACACAATATCAACCCAACACATGCGG CTTGAGGAGGGAATAACCTATCCTTCAATCTGGTTGCCAAGGTTTGATATTTGTTTTGAAACTGCCGACAAGGTGAAGCG CTTCGGTATGGAATCGGTTTACTCTATGCTGAAAAAAACGGCCGGTACAACCCTGGATCAAGAGATAACAATAAGGACAC TGATTGAAAAAATCACCCAAAGCAATATGGTGACAGAGCATGGGTTTGATTTTGACGTGCGGGAATTTGTGATTGAGTGG GTACGAAGAGATTTGCTTAACATTATCTTTGGCAATAGTGACAATCACGGCCTGAACACCTCATTTATCAAAGACTCCTT CAGTATTCAGCTAGCCCCAATTTATGACTTCGCCCCAATGAAAGCAGATCCAGAGGGCATACCAAGAACAACCAAATGGG CACAAAAATTAGAAGTTGGCGGAGAATACAACTATGAAGCCATTACGGCTGCACTCGCCGACCTGGTGCCTGAAAACGAA CTTATGCATGCATTAAAAACCACAGCAAAACAATTGATTGGGCTTAAGGAAAGATTACAAAACAGAGGCGTTCCCCTGCA AATCATTGAGATGCCATCGATCGGTTTTGACTATATACCAGAGAAGTTGAAGAAATGGGGTTTGCTATGA
Upstream 100 bases:
>100_bases ATTATGCTGAATCGGCAATTGTGAGTATAAAAAGTTACACTAAATAGAAAAATCGTGTTTAATGAGTAATTAGTGACTCA TTATCTACCGGGAGGCGGAT
Downstream 100 bases:
>100_bases AAACGCCAGAAAAGATAAGTGATTCAGCGAGAGAGACCATTAATCGGCTGCGTGAAAAAAACAAGGCTAATTATAAAGAA AACAGCAGCATCAGCGATGT
Product: HipA domain-containing protein
Products: NA
Alternate protein names: HipA Domain Protein; Capsule Biosynthesis Protein
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues METLTLQAFLNNQWIDVANIAFPDAEQQSYKITELHYHTDFAIDYLDRDDNHAVSINHPVSLFFEDEGPRGWMKFLDDIV PNGSSRRYWLKYLDIDELTPGQQNFVLLKYGTMSPVGNLRIKESLAEANPLADRLFFSIEDVKNRAGDFLDYAQQRGAAA GGATGAGGEAPKLLLRCSHDERIWIDTFQNDLTNRDIPYLVKYPRGQKTEIDCNIVRAEFHYYHELEAMGFNTISTQHMR LEEGITYPSIWLPRFDICFETADKVKRFGMESVYSMLKKTAGTTLDQEITIRTLIEKITQSNMVTEHGFDFDVREFVIEW VRRDLLNIIFGNSDNHGLNTSFIKDSFSIQLAPIYDFAPMKADPEGIPRTTKWAQKLEVGGEYNYEAITAALADLVPENE LMHALKTTAKQLIGLKERLQNRGVPLQIIEMPSIGFDYIPEKLKKWGLL
Sequences:
>Translated_449_residues METLTLQAFLNNQWIDVANIAFPDAEQQSYKITELHYHTDFAIDYLDRDDNHAVSINHPVSLFFEDEGPRGWMKFLDDIV PNGSSRRYWLKYLDIDELTPGQQNFVLLKYGTMSPVGNLRIKESLAEANPLADRLFFSIEDVKNRAGDFLDYAQQRGAAA GGATGAGGEAPKLLLRCSHDERIWIDTFQNDLTNRDIPYLVKYPRGQKTEIDCNIVRAEFHYYHELEAMGFNTISTQHMR LEEGITYPSIWLPRFDICFETADKVKRFGMESVYSMLKKTAGTTLDQEITIRTLIEKITQSNMVTEHGFDFDVREFVIEW VRRDLLNIIFGNSDNHGLNTSFIKDSFSIQLAPIYDFAPMKADPEGIPRTTKWAQKLEVGGEYNYEAITAALADLVPENE LMHALKTTAKQLIGLKERLQNRGVPLQIIEMPSIGFDYIPEKLKKWGLL >Mature_449_residues METLTLQAFLNNQWIDVANIAFPDAEQQSYKITELHYHTDFAIDYLDRDDNHAVSINHPVSLFFEDEGPRGWMKFLDDIV PNGSSRRYWLKYLDIDELTPGQQNFVLLKYGTMSPVGNLRIKESLAEANPLADRLFFSIEDVKNRAGDFLDYAQQRGAAA GGATGAGGEAPKLLLRCSHDERIWIDTFQNDLTNRDIPYLVKYPRGQKTEIDCNIVRAEFHYYHELEAMGFNTISTQHMR LEEGITYPSIWLPRFDICFETADKVKRFGMESVYSMLKKTAGTTLDQEITIRTLIEKITQSNMVTEHGFDFDVREFVIEW VRRDLLNIIFGNSDNHGLNTSFIKDSFSIQLAPIYDFAPMKADPEGIPRTTKWAQKLEVGGEYNYEAITAALADLVPENE LMHALKTTAKQLIGLKERLQNRGVPLQIIEMPSIGFDYIPEKLKKWGLL
Specific function: Unknown
COG id: COG3550
COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51471; Mature: 51471
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METLTLQAFLNNQWIDVANIAFPDAEQQSYKITELHYHTDFAIDYLDRDDNHAVSINHPV CCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEECCEEEEEECCCCCCEEEECCCE SLFFEDEGPRGWMKFLDDIVPNGSSRRYWLKYLDIDELTPGQQNFVLLKYGTMSPVGNLR EEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECHHCCCCCCCCEEEEEECCCCCCCCCH IKESLAEANPLADRLFFSIEDVKNRAGDFLDYAQQRGAAAGGATGAGGEAPKLLLRCSHD HHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCC ERIWIDTFQNDLTNRDIPYLVKYPRGQKTEIDCNIVRAEFHYYHELEAMGFNTISTQHMR CEEEEECHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCCHHHHH LEEGITYPSIWLPRFDICFETADKVKRFGMESVYSMLKKTAGTTLDQEITIRTLIEKITQ HHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH SNMVTEHGFDFDVREFVIEWVRRDLLNIIFGNSDNHGLNTSFIKDSFSIQLAPIYDFAPM CCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCHHEECCCCEEEEEEEECCCCC KADPEGIPRTTKWAQKLEVGGEYNYEAITAALADLVPENELMHALKTTAKQLIGLKERLQ CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH NRGVPLQIIEMPSIGFDYIPEKLKKWGLL HCCCCEEEEECCCCCHHHHHHHHHHCCCC >Mature Secondary Structure METLTLQAFLNNQWIDVANIAFPDAEQQSYKITELHYHTDFAIDYLDRDDNHAVSINHPV CCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEECCEEEEEECCCCCCEEEECCCE SLFFEDEGPRGWMKFLDDIVPNGSSRRYWLKYLDIDELTPGQQNFVLLKYGTMSPVGNLR EEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECHHCCCCCCCCEEEEEECCCCCCCCCH IKESLAEANPLADRLFFSIEDVKNRAGDFLDYAQQRGAAAGGATGAGGEAPKLLLRCSHD HHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCC ERIWIDTFQNDLTNRDIPYLVKYPRGQKTEIDCNIVRAEFHYYHELEAMGFNTISTQHMR CEEEEECHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCCHHHHH LEEGITYPSIWLPRFDICFETADKVKRFGMESVYSMLKKTAGTTLDQEITIRTLIEKITQ HHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH SNMVTEHGFDFDVREFVIEWVRRDLLNIIFGNSDNHGLNTSFIKDSFSIQLAPIYDFAPM CCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCHHEECCCCEEEEEEEECCCCC KADPEGIPRTTKWAQKLEVGGEYNYEAITAALADLVPENELMHALKTTAKQLIGLKERLQ CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH NRGVPLQIIEMPSIGFDYIPEKLKKWGLL HCCCCEEEEECCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA