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The map label for this gene is smpA [H]

Identifier: 157371922

GI number: 157371922

Start: 4080062

End: 4080400

Strand: Direct

Name: smpA [H]

Synonym: Spro_3687

Alternate gene names: 157371922

Gene position: 4080062-4080400 (Clockwise)

Preceding gene: 157371921

Following gene: 157371925

Centisome position: 74.88

GC content: 51.33

Gene sequence:

>339_bases
ATGCGCTGTAAAACGCTGACTGCCGCCGCTGTGGTTCTTGTGATGCTGACTGCAGGCTGTTCTACTTTTGAGAAGGTGGT
TTACCGGCCTGACATCAACCAAGGGAACTACCTGACGTCCACCGACGTAGCTAAAATTCAAAAAGGTATGACCCAGCAAC
AGGTCGCTTATACATTGGGCACCCCAATGCTGCAGGACCCGTTCGGTACTCAGACGTGGTTCTATGTGTTCCGTCAGCAA
CCTGGTCATGAAAATATCACCCAGCAAACCCTGACGCTGACCTTTAATAGCGCGGGTGTCTTGACCGATATTCAGAACAA
GCCGGCGCTGACCAAGTAA

Upstream 100 bases:

>100_bases
TTTTACTTTCCTGAGGTCATATTGGGGCCCTGTAAAGGTTTCCAACTGCTGCAAGGTCTATTATCATCGGCATCCTATGC
CCTAAAGGAATGTGATTACT

Downstream 100 bases:

>100_bases
TCCGCGCAGGAACTATCGTCCGGCCCGTGAGGGACGCGTCAAGTTCTTCATGACAGTACCAGGCTGCAACTCGGAAGATA
AAATTCTGATAAAAAATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MRCKTLTAAAVVLVMLTAGCSTFEKVVYRPDINQGNYLTSTDVAKIQKGMTQQQVAYTLGTPMLQDPFGTQTWFYVFRQQ
PGHENITQQTLTLTFNSAGVLTDIQNKPALTK

Sequences:

>Translated_112_residues
MRCKTLTAAAVVLVMLTAGCSTFEKVVYRPDINQGNYLTSTDVAKIQKGMTQQQVAYTLGTPMLQDPFGTQTWFYVFRQQ
PGHENITQQTLTLTFNSAGVLTDIQNKPALTK
>Mature_112_residues
MRCKTLTAAAVVLVMLTAGCSTFEKVVYRPDINQGNYLTSTDVAKIQKGMTQQQVAYTLGTPMLQDPFGTQTWFYVFRQQ
PGHENITQQTLTLTFNSAGVLTDIQNKPALTK

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

Organism=Escherichia coli, GI87082138, Length=111, Percent_Identity=81.981981981982, Blast_Score=199, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 12435; Mature: 12435

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCKTLTAAAVVLVMLTAGCSTFEKVVYRPDINQGNYLTSTDVAKIQKGMTQQQVAYTLG
CCCCHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCEECCHHHHHHHHCCCHHHHHHHHC
TPMLQDPFGTQTWFYVFRQQPGHENITQQTLTLTFNSAGVLTDIQNKPALTK
CCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCC
>Mature Secondary Structure
MRCKTLTAAAVVLVMLTAGCSTFEKVVYRPDINQGNYLTSTDVAKIQKGMTQQQVAYTLG
CCCCHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCEECCHHHHHHHHCCCHHHHHHHHC
TPMLQDPFGTQTWFYVFRQQPGHENITQQTLTLTFNSAGVLTDIQNKPALTK
CCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]