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The map label for this gene is recO

Identifier: 157371902

GI number: 157371902

Start: 4059754

End: 4060485

Strand: Reverse

Name: recO

Synonym: Spro_3667

Alternate gene names: 157371902

Gene position: 4060485-4059754 (Counterclockwise)

Preceding gene: 157371903

Following gene: 157371901

Centisome position: 74.52

GC content: 58.88

Gene sequence:

>732_bases
ATGGACGGCTGGGAACGCGCTTTCGTCCTGCATGGACGACCGTACAGTGAAACCAGCCTGATGCTGGATATGTTTACCGA
AGGTCATGGGCGGGTGCGCTTGCTGGCAAAAGGCGCGCGCAGCCGCCGTTCCAATTTAAAGGGTTGCCTGCAACCCTTTA
CTCCTCTGCTGGTACGCTGGGGCGGTCGCGGCGAAGTCAAAACGCTGCGTAGCGCCGAAGCGGTCTCTCTCGGTTTACCC
CTTAGCGGCATGATGCTCTACAGCGGCCTATACGTGAATGAATTGCTGTCACGGGTGCTGGAGCAGGAAGCAAACTACTC
GGTATTATTCTTCGATTATCTGCAATGTTTGCAGGCGCTGGCGGCAGAAGACGTTTCGCCGGAGCAGGCATTACGTCAGT
TCGAATTGGCCTTGCTCAATCACCTGGGCTACGGCCTGGACTTCCTGCACTGCGCCGGTAGTGGCCTGCCGGTGGACGAC
GGCATGACCTATCGCTACCGCGAGGAAAAAGGCTTTATCGCCAGCCTGGTGGTGGACCATTACAGCTTTACCGGCCGCGA
GCTGCGTGCGCTGGCAGAGCGCCAGTTCCCGGACGTGCAAACCTTGCGTGCCGCCAAACGTTTCACCCGCATGGCGCTCA
AGCCCTATTTGGGGGGCAAACCACTGAAGAGCCGCGAGCTGTTTCGTCAGTTTGTTCGTAAACAGCCGGATCCGCCGGTC
GACGACGCCTGA

Upstream 100 bases:

>100_bases
TGCATCTGGAACTGTGGGTGAAAGTGAAATCGGGCTGGGCGGACGACGAACGTGCGTTGCGTAGCCTGGGCTATACCGAC
GACCTGAAATAAACTATCCA

Downstream 100 bases:

>100_bases
CCTTTTCCCCTTTTGCAGCACTGTTCCCGCGTGTAAACTACGGCCACTGAAAATCGTTTTTTAGAGGGTTGTCATGGCTG
ATTTGCTGCTGGGCGTCAAT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MDGWERAFVLHGRPYSETSLMLDMFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRWGGRGEVKTLRSAEAVSLGLP
LSGMMLYSGLYVNELLSRVLEQEANYSVLFFDYLQCLQALAAEDVSPEQALRQFELALLNHLGYGLDFLHCAGSGLPVDD
GMTYRYREEKGFIASLVVDHYSFTGRELRALAERQFPDVQTLRAAKRFTRMALKPYLGGKPLKSRELFRQFVRKQPDPPV
DDA

Sequences:

>Translated_243_residues
MDGWERAFVLHGRPYSETSLMLDMFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRWGGRGEVKTLRSAEAVSLGLP
LSGMMLYSGLYVNELLSRVLEQEANYSVLFFDYLQCLQALAAEDVSPEQALRQFELALLNHLGYGLDFLHCAGSGLPVDD
GMTYRYREEKGFIASLVVDHYSFTGRELRALAERQFPDVQTLRAAKRFTRMALKPYLGGKPLKSRELFRQFVRKQPDPPV
DDA
>Mature_243_residues
MDGWERAFVLHGRPYSETSLMLDMFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRWGGRGEVKTLRSAEAVSLGLP
LSGMMLYSGLYVNELLSRVLEQEANYSVLFFDYLQCLQALAAEDVSPEQALRQFELALLNHLGYGLDFLHCAGSGLPVDD
GMTYRYREEKGFIASLVVDHYSFTGRELRALAERQFPDVQTLRAAKRFTRMALKPYLGGKPLKSRELFRQFVRKQPDPPV
DDA

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

Organism=Escherichia coli, GI2367140, Length=235, Percent_Identity=77.4468085106383, Blast_Score=375, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_SERP5 (A8GI23)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001479891.1
- ProteinModelPortal:   A8GI23
- STRING:   A8GI23
- GeneID:   5606412
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_3667
- eggNOG:   COG1381
- HOGENOM:   HBG645116
- OMA:   SILQPFQ
- ProtClustDB:   PRK00085
- BioCyc:   SPRO399741:SPRO_3667-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 27509; Mature: 27509

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGWERAFVLHGRPYSETSLMLDMFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRW
CCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHEEC
GGRGEVKTLRSAEAVSLGLPLSGMMLYSGLYVNELLSRVLEQEANYSVLFFDYLQCLQAL
CCCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH
AAEDVSPEQALRQFELALLNHLGYGLDFLHCAGSGLPVDDGMTYRYREEKGFIASLVVDH
HHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHH
YSFTGRELRALAERQFPDVQTLRAAKRFTRMALKPYLGGKPLKSRELFRQFVRKQPDPPV
HCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
DDA
CCC
>Mature Secondary Structure
MDGWERAFVLHGRPYSETSLMLDMFTEGHGRVRLLAKGARSRRSNLKGCLQPFTPLLVRW
CCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHEEC
GGRGEVKTLRSAEAVSLGLPLSGMMLYSGLYVNELLSRVLEQEANYSVLFFDYLQCLQAL
CCCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH
AAEDVSPEQALRQFELALLNHLGYGLDFLHCAGSGLPVDDGMTYRYREEKGFIASLVVDH
HHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHH
YSFTGRELRALAERQFPDVQTLRAAKRFTRMALKPYLGGKPLKSRELFRQFVRKQPDPPV
HCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
DDA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA