| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is srlA [H]
Identifier: 157371804
GI number: 157371804
Start: 3947234
End: 3947782
Strand: Direct
Name: srlA [H]
Synonym: Spro_3569
Alternate gene names: 157371804
Gene position: 3947234-3947782 (Clockwise)
Preceding gene: 157371803
Following gene: 157371805
Centisome position: 72.44
GC content: 54.64
Gene sequence:
>549_bases ATGATTGAGCTAATCACCCACGGCGCCGAATGGTTTATCGGCCTGTTTCAGAAAGGTGGTGAAGTGTTTGTCGGCATGGT GACCGGCATTTTACCTTTGTTAATCAGCCTGTTGGTCATTATGAACGCGCTGATCAAATTTGTTGGCCAGGAACGTATCG AACGCTTGGCGCAGCGCTGCGCGGGGAACCCGGTTTCACGCTATCTGCTGCTGCCGCTGATCGGTACCTTTGTGTTTTGC AACCCGATGACTCTCAGCCTCGGCCGTTTTATGCCAGAGAAATACAAACCCAGCTACTACGCGGCGGCGTCCTACAGCTG TCACTCGATGAATGGCCTGTTCCCGCATATCAACCCCGGCGAACTGTTCGTTTACCTCGGTATCGCCAGCGGGCTGACTA CCCTCGGCCTGCCGCTGGGGCCGTTGGCGGTAAGCTATTTTCTGGTTGGCCTGTTTACCAACTTTTTCCGCGGTTGGGTA ACCGATCTCACCACCAGCCTGTTCGAACGCAAGATGGGCATCCGCCTGGACCGTCAGGTACAACTTTAA
Upstream 100 bases:
>100_bases TATTTAAAACAAATCAATCCATAAAGTGATTAGTGTAAGGCCCATGGCGACAGAGCCACCGTTCGCTCCAGGCCATACCT TCCATCTCAGGAGAACAATA
Downstream 100 bases:
>100_bases TCCGTGGAGTTCAGCATGAGTGCTTTTATCCGTATTGAGAAAGGCGATAGCGGCTGGGGTGGCCCGTTGCAGTTACCGAT CGAGCCGGGGAAAAAAGTGG
Product: PTS system glucitol/sorbitol-specific transporter subunit IIC
Products: protein histidine; sugar phosphate
Alternate protein names: EIIC-Gut; PTS system glucitol/sorbitol-specific EIIC component [H]
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MIELITHGAEWFIGLFQKGGEVFVGMVTGILPLLISLLVIMNALIKFVGQERIERLAQRCAGNPVSRYLLLPLIGTFVFC NPMTLSLGRFMPEKYKPSYYAAASYSCHSMNGLFPHINPGELFVYLGIASGLTTLGLPLGPLAVSYFLVGLFTNFFRGWV TDLTTSLFERKMGIRLDRQVQL
Sequences:
>Translated_182_residues MIELITHGAEWFIGLFQKGGEVFVGMVTGILPLLISLLVIMNALIKFVGQERIERLAQRCAGNPVSRYLLLPLIGTFVFC NPMTLSLGRFMPEKYKPSYYAAASYSCHSMNGLFPHINPGELFVYLGIASGLTTLGLPLGPLAVSYFLVGLFTNFFRGWV TDLTTSLFERKMGIRLDRQVQL >Mature_182_residues MIELITHGAEWFIGLFQKGGEVFVGMVTGILPLLISLLVIMNALIKFVGQERIERLAQRCAGNPVSRYLLLPLIGTFVFC NPMTLSLGRFMPEKYKPSYYAAASYSCHSMNGLFPHINPGELFVYLGIASGLTTLGLPLGPLAVSYFLVGLFTNFFRGWV TDLTTSLFERKMGIRLDRQVQL
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG3730
COG function: function code G; Phosphotransferase system sorbitol-specific component IIC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-5 domain [H]
Homologues:
Organism=Escherichia coli, GI48994904, Length=182, Percent_Identity=90.1098901098901, Blast_Score=340, Evalue=3e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004699 [H]
Pfam domain/function: PF03608 EII-GUT [H]
EC number: 2.7.1.69
Molecular weight: Translated: 20273; Mature: 20273
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS51107 PTS_EIIC_TYPE_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELITHGAEWFIGLFQKGGEVFVGMVTGILPLLISLLVIMNALIKFVGQERIERLAQRC CCEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGNPVSRYLLLPLIGTFVFCNPMTLSLGRFMPEKYKPSYYAAASYSCHSMNGLFPHINPG CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHCCCCEEEECCCCHHCCCCCCCCCCCC ELFVYLGIASGLTTLGLPLGPLAVSYFLVGLFTNFFRGWVTDLTTSLFERKMGIRLDRQV CEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QL CC >Mature Secondary Structure MIELITHGAEWFIGLFQKGGEVFVGMVTGILPLLISLLVIMNALIKFVGQERIERLAQRC CCEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGNPVSRYLLLPLIGTFVFCNPMTLSLGRFMPEKYKPSYYAAASYSCHSMNGLFPHINPG CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHCCCCEEEECCCCHHCCCCCCCCCCCC ELFVYLGIASGLTTLGLPLGPLAVSYFLVGLFTNFFRGWVTDLTTSLFERKMGIRLDRQV CEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3553176; 9205837; 9278503; 1334233 [H]