| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yfgD [H]
Identifier: 157371755
GI number: 157371755
Start: 3893458
End: 3893811
Strand: Direct
Name: yfgD [H]
Synonym: Spro_3518
Alternate gene names: 157371755
Gene position: 3893458-3893811 (Clockwise)
Preceding gene: 157371754
Following gene: 157371757
Centisome position: 71.45
GC content: 54.8
Gene sequence:
>354_bases TTGAAAAACGTCACTATTTACCACAACCCGCGCTGCTCCAAGAGCCGCGAAACCCTGGCGCTGCTGGAACAGCATGGCGT AACCCCTGAAGTGGTGCTGTACCTGGAGACGCCACCGTCGGTGGATCAGTTGAAAAAACTGTTGAAGGAACTGGGTTTCA CCTCGGCACGCGAGCTGATGCGCAAAAAAGAAGATCTGTACAAGGAATTGAAACTGGCGGATGAAAGCCTGAGCGAAGCC CAGTTGTTAGCGGCCATGGTGGCGAATCCGAAGCTGATCGAACGCCCTATTGTGGTTAACGGCAACAAGGCGCGTATCGG CCGGCCGCCGGAGCAGGTGCTGGAAATTCTGTAA
Upstream 100 bases:
>100_bases TGAAACAGGCGCGCTATGATGCGCGCATCGACCAGTTGCGCCAATTGCAGGAGCGTTTCCGCCAGTACCAGCGCAGCTGA TTTTGAAAAGGATGAGTTAA
Downstream 100 bases:
>100_bases ACGTGATAGTGGGCACTGATTATGGTGCCCAAAATTTTCGAAGTGAAGCTGTTATAGCCCCAGGATCTCTTTCACAAACG GGATGGTCAGCTTGCGCTGG
Product: arsenate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MKNVTIYHNPRCSKSRETLALLEQHGVTPEVVLYLETPPSVDQLKKLLKELGFTSARELMRKKEDLYKELKLADESLSEA QLLAAMVANPKLIERPIVVNGNKARIGRPPEQVLEIL
Sequences:
>Translated_117_residues MKNVTIYHNPRCSKSRETLALLEQHGVTPEVVLYLETPPSVDQLKKLLKELGFTSARELMRKKEDLYKELKLADESLSEA QLLAAMVANPKLIERPIVVNGNKARIGRPPEQVLEIL >Mature_117_residues MKNVTIYHNPRCSKSRETLALLEQHGVTPEVVLYLETPPSVDQLKKLLKELGFTSARELMRKKEDLYKELKLADESLSEA QLLAAMVANPKLIERPIVVNGNKARIGRPPEQVLEIL
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788841, Length=116, Percent_Identity=74.1379310344828, Blast_Score=169, Evalue=4e-44, Organism=Escherichia coli, GI1789918, Length=117, Percent_Identity=47.008547008547, Blast_Score=110, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006659 - InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 13246; Mature: 13246
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVTIYHNPRCSKSRETLALLEQHGVTPEVVLYLETPPSVDQLKKLLKELGFTSARELM CCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHH RKKEDLYKELKLADESLSEAQLLAAMVANPKLIERPIVVNGNKARIGRPPEQVLEIL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCCCCCCCHHHHHHHC >Mature Secondary Structure MKNVTIYHNPRCSKSRETLALLEQHGVTPEVVLYLETPPSVDQLKKLLKELGFTSARELM CCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHH RKKEDLYKELKLADESLSEAQLLAAMVANPKLIERPIVVNGNKARIGRPPEQVLEIL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCCCCCCCHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]