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The map label for this gene is yfcH [H]

Identifier: 157371559

GI number: 157371559

Start: 3678131

End: 3679045

Strand: Direct

Name: yfcH [H]

Synonym: Spro_3322

Alternate gene names: 157371559

Gene position: 3678131-3679045 (Clockwise)

Preceding gene: 157371558

Following gene: 157371575

Centisome position: 67.5

GC content: 59.13

Gene sequence:

>915_bases
ATGCGAGTCCTGATAACCGGCGCCACAGGATTGATAGGGAGCAGCCTGACGCAACGGCTGCTGGGCCTTTCTCATCAAAT
TACGGTGCTGAGCCGCAACGTGCAACGCGCACGTGAGCGCTTTGGCGAGCAGGTCAGCTATTGGTCAACGCTGCAGGACA
AGCCCTCGCTGGACGGTTTTGACGCCGTAATCAACCTGGCCGGTGAGCCTATCGCCGACAAGCGCTGGAGCAAAGCGCAG
AAAGAACGCCTGTGCCACAGCCGCTGGGATCTGACCGAACAGTTGGCCAAGTTGATTAACGCCGGCAGCACCCCGCCCGG
CGTGCTGATTTCCGGTTCCGCAACCGGCTATTATGGCGATCAGGGCCAGGCGGTGGTTACCGAAGACGAAGCCCCGCATG
ACGAATTCACCCATCAGCTATGCCAACGCTGGGAGTCTCTGGCTCTGCAAGCGCAAAGCGACGCCACTCGCGTCTGTTTG
CTGCGTACCGGCGTGGTGCTGGCGGCCAAAGGCGGCGCGTTGGCTAAAATGTTACCGCCATTCCGCCTTGGGCTGGGTGG
GCCGATAGGTGACGGCCGCCAATATCTGCCGTGGATCCACCTGGAAGACATGGTTGATGGCATCGTTTATTTACTGGATC
ACCAAACCCTGCAAGGGCCATTTAATATGGTCGCCCCTTACCCGGTTCACAACGAACAGTTTGCCGCTCAGCTCGCCAAC
GTGCTCGACCGACCTGCGTTTTTACGCGTGCCGGCCTTTGCCATGCGTTTATTGATGGGGGAAGCGGCGGTATTGGTGCT
GGGTGGACAGCGAGCGGTACCGAAAAGGCTGGAAGAAGCCGGTTTCAGCTTCCGCTTTTTGGAGTTGGAACAGGCGTTGG
ATGATGTGATTAATCAGCGGGGCGCAGCCCGCTGA

Upstream 100 bases:

>100_bases
GGAGATAGATAAACTATTGGCCCTGCGCTACGCCGACTCGGTTTCGATGACCATGAGCTATCGCCGGGCCTGAAAACCAC
CGTTTCAGGGAGAATCGACC

Downstream 100 bases:

>100_bases
GGATCCGATCGGGGCCAGAAAGATCTGGCCCCAAAAGTCCGTTATTTTAACGCGCCGGAAAGAAACTGCTGCAGGCGAGG
ACTTTTCGGATTGCCGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRVLITGATGLIGSSLTQRLLGLSHQITVLSRNVQRARERFGEQVSYWSTLQDKPSLDGFDAVINLAGEPIADKRWSKAQ
KERLCHSRWDLTEQLAKLINAGSTPPGVLISGSATGYYGDQGQAVVTEDEAPHDEFTHQLCQRWESLALQAQSDATRVCL
LRTGVVLAAKGGALAKMLPPFRLGLGGPIGDGRQYLPWIHLEDMVDGIVYLLDHQTLQGPFNMVAPYPVHNEQFAAQLAN
VLDRPAFLRVPAFAMRLLMGEAAVLVLGGQRAVPKRLEEAGFSFRFLELEQALDDVINQRGAAR

Sequences:

>Translated_304_residues
MRVLITGATGLIGSSLTQRLLGLSHQITVLSRNVQRARERFGEQVSYWSTLQDKPSLDGFDAVINLAGEPIADKRWSKAQ
KERLCHSRWDLTEQLAKLINAGSTPPGVLISGSATGYYGDQGQAVVTEDEAPHDEFTHQLCQRWESLALQAQSDATRVCL
LRTGVVLAAKGGALAKMLPPFRLGLGGPIGDGRQYLPWIHLEDMVDGIVYLLDHQTLQGPFNMVAPYPVHNEQFAAQLAN
VLDRPAFLRVPAFAMRLLMGEAAVLVLGGQRAVPKRLEEAGFSFRFLELEQALDDVINQRGAAR
>Mature_304_residues
MRVLITGATGLIGSSLTQRLLGLSHQITVLSRNVQRARERFGEQVSYWSTLQDKPSLDGFDAVINLAGEPIADKRWSKAQ
KERLCHSRWDLTEQLAKLINAGSTPPGVLISGSATGYYGDQGQAVVTEDEAPHDEFTHQLCQRWESLALQAQSDATRVCL
LRTGVVLAAKGGALAKMLPPFRLGLGGPIGDGRQYLPWIHLEDMVDGIVYLLDHQTLQGPFNMVAPYPVHNEQFAAQLAN
VLDRPAFLRVPAFAMRLLMGEAAVLVLGGQRAVPKRLEEAGFSFRFLELEQALDDVINQRGAAR

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=301, Percent_Identity=36.2126245847176, Blast_Score=186, Evalue=3e-47,
Organism=Escherichia coli, GI1788642, Length=297, Percent_Identity=69.023569023569, Blast_Score=429, Evalue=1e-122,
Organism=Drosophila melanogaster, GI28573846, Length=296, Percent_Identity=29.0540540540541, Blast_Score=149, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33378; Mature: 33378

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLITGATGLIGSSLTQRLLGLSHQITVLSRNVQRARERFGEQVSYWSTLQDKPSLDGF
CEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
DAVINLAGEPIADKRWSKAQKERLCHSRWDLTEQLAKLINAGSTPPGVLISGSATGYYGD
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCEECC
QGQAVVTEDEAPHDEFTHQLCQRWESLALQAQSDATRVCLLRTGVVLAAKGGALAKMLPP
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEECCCCHHHHCCC
FRLGLGGPIGDGRQYLPWIHLEDMVDGIVYLLDHQTLQGPFNMVAPYPVHNEQFAAQLAN
HHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCHHHHHHHHH
VLDRPAFLRVPAFAMRLLMGEAAVLVLGGQRAVPKRLEEAGFSFRFLELEQALDDVINQR
HHCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHC
GAAR
CCCC
>Mature Secondary Structure
MRVLITGATGLIGSSLTQRLLGLSHQITVLSRNVQRARERFGEQVSYWSTLQDKPSLDGF
CEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
DAVINLAGEPIADKRWSKAQKERLCHSRWDLTEQLAKLINAGSTPPGVLISGSATGYYGD
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCEECC
QGQAVVTEDEAPHDEFTHQLCQRWESLALQAQSDATRVCLLRTGVVLAAKGGALAKMLPP
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEECCCCHHHHCCC
FRLGLGGPIGDGRQYLPWIHLEDMVDGIVYLLDHQTLQGPFNMVAPYPVHNEQFAAQLAN
HHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCHHHHHHHHH
VLDRPAFLRVPAFAMRLLMGEAAVLVLGGQRAVPKRLEEAGFSFRFLELEQALDDVINQR
HHCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHC
GAAR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]