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The map label for this gene is nahR [H]

Identifier: 157371497

GI number: 157371497

Start: 3596431

End: 3597333

Strand: Direct

Name: nahR [H]

Synonym: Spro_3260

Alternate gene names: 157371497

Gene position: 3596431-3597333 (Clockwise)

Preceding gene: 157371494

Following gene: 157371499

Centisome position: 66.0

GC content: 55.81

Gene sequence:

>903_bases
ATGAACATCCTGCAAATGGACATGAACCTGCTGAAAGTGCTCTATCTGTTGACCAGCACCGGCTCCAGCCAGAAAACGGC
GGACAAGTTGGGCATCAGCACTTCGGCCGTCAGCCATGCATTGGCCCGCCTGCGTGAAGTGCTCAATGAGCCTTTATTTC
GTCGGGAGGGGCATCGCCAGGTGCCGACGCTGTTTGCCCTGTCGCTTAAAGAGAAACTAACGCCATTGTTCTCTGCGCTG
GACGGTGAACTGTTCGGCCATTTGCAGGATGCACCACGACATTTCAACCTGGTTGCACCGCCGGCACTGCATCCGATATT
GCTGCCGCTGCTGGCACAGAAAAGCACACTCGCCAATGTGGATATCCGTTGTCAGAACTTTGAGCGGCGCTCATGGCGGA
ACGATCTGCTGGAAGGCAGCATCGATATGGTGATCGCAGTGGGCGATCATCAACAGCGTACCAGCGCACTGCGTTATGCA
CTGATTGGCAGCACTCGCCTGGTCGCAGTATTTGGGGGCCCCTTGCAGCAGAGGTTGCAGCACAAGAGCGGTCTGGCCTT
CAGCGAACTGGCAAACTATGCGCACTATTACTGTCACCCTTGGCCACAGGCGGAAAATGAGCTGGATCGTCAGTTGGAAC
GCCAGGGTTTACAACGCAGGATCCAGCTCAGCTGTGCCGATTATGCCCAGTTGCCACCAGTGCTGCGGGCGGCCCCGCTG
ATGGCGGTAGTTCCGCAGCCCTGGTTCAGTGCACAACCCGATAAACGAGGATTATTCACCCTGCCCATCCTGGACAACCT
GGCAATTGGCCATCTGTTTTCACACTATCGGCAGGGAGAGGTTGAGTGGAAAAAGCGTCTTATTTCCGCGCTTCATGCGG
AACTGCGGCCTTATTATCAGTAA

Upstream 100 bases:

>100_bases
ATAACCAAGGTTTTTTTTCATGTTCCAATTCTATGGAGGTAAACGGGGCTGAAGTATACTCAGCCCAATATTGAAACGTA
TTCAATTAAGAAGGCCATTA

Downstream 100 bases:

>100_bases
CGACAATCAGAAGCCAAATTCACTCAGTGCCGCAATATCATCCGGACGACGGCCAAGCGGCCAATGGAACTGACGATCCT
GCTCGCGGATCGGCATATCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MNILQMDMNLLKVLYLLTSTGSSQKTADKLGISTSAVSHALARLREVLNEPLFRREGHRQVPTLFALSLKEKLTPLFSAL
DGELFGHLQDAPRHFNLVAPPALHPILLPLLAQKSTLANVDIRCQNFERRSWRNDLLEGSIDMVIAVGDHQQRTSALRYA
LIGSTRLVAVFGGPLQQRLQHKSGLAFSELANYAHYYCHPWPQAENELDRQLERQGLQRRIQLSCADYAQLPPVLRAAPL
MAVVPQPWFSAQPDKRGLFTLPILDNLAIGHLFSHYRQGEVEWKKRLISALHAELRPYYQ

Sequences:

>Translated_300_residues
MNILQMDMNLLKVLYLLTSTGSSQKTADKLGISTSAVSHALARLREVLNEPLFRREGHRQVPTLFALSLKEKLTPLFSAL
DGELFGHLQDAPRHFNLVAPPALHPILLPLLAQKSTLANVDIRCQNFERRSWRNDLLEGSIDMVIAVGDHQQRTSALRYA
LIGSTRLVAVFGGPLQQRLQHKSGLAFSELANYAHYYCHPWPQAENELDRQLERQGLQRRIQLSCADYAQLPPVLRAAPL
MAVVPQPWFSAQPDKRGLFTLPILDNLAIGHLFSHYRQGEVEWKKRLISALHAELRPYYQ
>Mature_300_residues
MNILQMDMNLLKVLYLLTSTGSSQKTADKLGISTSAVSHALARLREVLNEPLFRREGHRQVPTLFALSLKEKLTPLFSAL
DGELFGHLQDAPRHFNLVAPPALHPILLPLLAQKSTLANVDIRCQNFERRSWRNDLLEGSIDMVIAVGDHQQRTSALRYA
LIGSTRLVAVFGGPLQQRLQHKSGLAFSELANYAHYYCHPWPQAENELDRQLERQGLQRRIQLSCADYAQLPPVLRAAPL
MAVVPQPWFSAQPDKRGLFTLPILDNLAIGHLFSHYRQGEVEWKKRLISALHAELRPYYQ

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34004; Mature: 34004

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILQMDMNLLKVLYLLTSTGSSQKTADKLGISTSAVSHALARLREVLNEPLFRREGHRQ
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCC
VPTLFALSLKEKLTPLFSALDGELFGHLQDAPRHFNLVAPPALHPILLPLLAQKSTLANV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHCCC
DIRCQNFERRSWRNDLLEGSIDMVIAVGDHQQRTSALRYALIGSTRLVAVFGGPLQQRLQ
EEEECCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
HKSGLAFSELANYAHYYCHPWPQAENELDRQLERQGLQRRIQLSCADYAQLPPVLRAAPL
HHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCH
MAVVPQPWFSAQPDKRGLFTLPILDNLAIGHLFSHYRQGEVEWKKRLISALHAELRPYYQ
HHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNILQMDMNLLKVLYLLTSTGSSQKTADKLGISTSAVSHALARLREVLNEPLFRREGHRQ
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCC
VPTLFALSLKEKLTPLFSALDGELFGHLQDAPRHFNLVAPPALHPILLPLLAQKSTLANV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHCCC
DIRCQNFERRSWRNDLLEGSIDMVIAVGDHQQRTSALRYALIGSTRLVAVFGGPLQQRLQ
EEEECCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
HKSGLAFSELANYAHYYCHPWPQAENELDRQLERQGLQRRIQLSCADYAQLPPVLRAAPL
HHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCH
MAVVPQPWFSAQPDKRGLFTLPILDNLAIGHLFSHYRQGEVEWKKRLISALHAELRPYYQ
HHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]