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The map label for this gene is rbsC [H]

Identifier: 157371456

GI number: 157371456

Start: 3546687

End: 3547682

Strand: Direct

Name: rbsC [H]

Synonym: Spro_3219

Alternate gene names: 157371456

Gene position: 3546687-3547682 (Clockwise)

Preceding gene: 157371455

Following gene: 157371457

Centisome position: 65.09

GC content: 57.43

Gene sequence:

>996_bases
GTGAGTAAAGAATTATCCCTGCAGAATGCGCAACCCTGGCGCCATCAGCTGTTTGAGTTTCTCTACAAGTGGGGGATGTT
ACTCACCGTTGTTGCGCTGATAGCCCTGTTCGGGCTGGCATCGGACAACTTTCTCGATCCCAACAACATCATCAATATCT
TACGCTCGATCGCCATCGTCACGGTGATCGCCATCGGAGTCTCCATCTCACTGTCGGTCGGCGGATTTGACCTTTCCGTC
GGTTCTACCGCGTCACTGGCCAACGCCCTGGTGGTTTCGCTGTTCGTCTGGTACGGCTTCGGCACTACCGGCGCGATTGT
GCTGACGTTGCTGATTTGCACGCTGGTCGGTTTGTTCAACGCTTTCCTGATCGTGGTGCTGAAAATTCCCGATATGCTGG
CAACCCTGGCCAGCCTGTTTGTGATCCAGGGCGTGGCGATGACCTACAGCTACGGCGGATCCATCACCCAAAATATGCTG
CTGCCGAACGGTGACATGGCAGAAGGCCTGATCCCGGAGATTTTCTCGTCTTTGGGCCAGGTGCCGGTGATCGTGCTGAT
TATGCTGGCGGTCACCGTTGTGGTGCAGCTGTTTCTGTCGCTGACCAAGCATGGCCGCCGCATGTACGCCATCGGCGGTA
ATCCGGAAGCGGCACGCCTGTCGGGCATTCGCACTGTACGTTACAGGGTTGCTGCCTATGTCATTTCTGCCCTGCTGGCC
TCGCTTGGCGGCATACTGCTGGCGTCACGTATTGGTTCGTCGCAGGTCAATGCAGGTGGCGGTTATCTGATGGATGCGGT
CGCCGCCGCCTACATTGGTTTTTCGCTGGCCGGCTCCGGCAAACCGAACGCGCTCGGCACGCTGGTCGGTGCGGTGATCC
TCGGCGTACTGCAAAACGGCCTGGTAATGCTCTCCGTCCCCTACTACGCGATGGACATTATCAAAGGCCTGGTGCTGGCC
CTGGCGTTGGCAATTACCTACATCCAGAAACGCTGA

Upstream 100 bases:

>100_bases
GCATCTGCGTGCTGTGGGATGGCCGGGTAGTGGCGGAACTTGACGCCGCCGAGATTGATGAAGAAACCCTATTACTGTAT
TCCACCGGAGGAACCCCAGC

Downstream 100 bases:

>100_bases
TTCTGCCCGGCGCACGCCCTGCTGCGCCGGTTTTCCCCTCAATTCATCAATTCATACGTTAGTTCTCCTTTCCCTTTATA
AGCATACAAATGATACGAAT

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSKELSLQNAQPWRHQLFEFLYKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIVTVIAIGVSISLSVGGFDLSV
GSTASLANALVVSLFVWYGFGTTGAIVLTLLICTLVGLFNAFLIVVLKIPDMLATLASLFVIQGVAMTYSYGGSITQNML
LPNGDMAEGLIPEIFSSLGQVPVIVLIMLAVTVVVQLFLSLTKHGRRMYAIGGNPEAARLSGIRTVRYRVAAYVISALLA
SLGGILLASRIGSSQVNAGGGYLMDAVAAAYIGFSLAGSGKPNALGTLVGAVILGVLQNGLVMLSVPYYAMDIIKGLVLA
LALAITYIQKR

Sequences:

>Translated_331_residues
MSKELSLQNAQPWRHQLFEFLYKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIVTVIAIGVSISLSVGGFDLSV
GSTASLANALVVSLFVWYGFGTTGAIVLTLLICTLVGLFNAFLIVVLKIPDMLATLASLFVIQGVAMTYSYGGSITQNML
LPNGDMAEGLIPEIFSSLGQVPVIVLIMLAVTVVVQLFLSLTKHGRRMYAIGGNPEAARLSGIRTVRYRVAAYVISALLA
SLGGILLASRIGSSQVNAGGGYLMDAVAAAYIGFSLAGSGKPNALGTLVGAVILGVLQNGLVMLSVPYYAMDIIKGLVLA
LALAITYIQKR
>Mature_330_residues
SKELSLQNAQPWRHQLFEFLYKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIVTVIAIGVSISLSVGGFDLSVG
STASLANALVVSLFVWYGFGTTGAIVLTLLICTLVGLFNAFLIVVLKIPDMLATLASLFVIQGVAMTYSYGGSITQNMLL
PNGDMAEGLIPEIFSSLGQVPVIVLIMLAVTVVVQLFLSLTKHGRRMYAIGGNPEAARLSGIRTVRYRVAAYVISALLAS
LGGILLASRIGSSQVNAGGGYLMDAVAAAYIGFSLAGSGKPNALGTLVGAVILGVLQNGLVMLSVPYYAMDIIKGLVLAL
ALAITYIQKR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=319, Percent_Identity=33.5423197492163, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1788896, Length=316, Percent_Identity=28.4810126582279, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI145693152, Length=321, Percent_Identity=31.4641744548287, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI87082395, Length=256, Percent_Identity=34.375, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789992, Length=130, Percent_Identity=41.5384615384615, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1787793, Length=282, Percent_Identity=29.7872340425532, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1790524, Length=315, Percent_Identity=26.3492063492064, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787794, Length=305, Percent_Identity=29.1803278688525, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788471, Length=335, Percent_Identity=27.1641791044776, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI145693214, Length=262, Percent_Identity=30.5343511450382, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34860; Mature: 34729

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKELSLQNAQPWRHQLFEFLYKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
TVIAIGVSISLSVGGFDLSVGSTASLANALVVSLFVWYGFGTTGAIVLTLLICTLVGLFN
HHHHHHHHEEEEECCEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AFLIVVLKIPDMLATLASLFVIQGVAMTYSYGGSITQNMLLPNGDMAEGLIPEIFSSLGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHCHHHHHHHHHCC
VPVIVLIMLAVTVVVQLFLSLTKHGRRMYAIGGNPEAARLSGIRTVRYRVAAYVISALLA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLGGILLASRIGSSQVNAGGGYLMDAVAAAYIGFSLAGSGKPNALGTLVGAVILGVLQNG
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
LVMLSVPYYAMDIIKGLVLALALAITYIQKR
EEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKELSLQNAQPWRHQLFEFLYKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
TVIAIGVSISLSVGGFDLSVGSTASLANALVVSLFVWYGFGTTGAIVLTLLICTLVGLFN
HHHHHHHHEEEEECCEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AFLIVVLKIPDMLATLASLFVIQGVAMTYSYGGSITQNMLLPNGDMAEGLIPEIFSSLGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHCHHHHHHHHHCC
VPVIVLIMLAVTVVVQLFLSLTKHGRRMYAIGGNPEAARLSGIRTVRYRVAAYVISALLA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLGGILLASRIGSSQVNAGGGYLMDAVAAAYIGFSLAGSGKPNALGTLVGAVILGVLQNG
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
LVMLSVPYYAMDIIKGLVLALALAITYIQKR
EEEEECHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]