| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is fbpB [H]
Identifier: 157371355
GI number: 157371355
Start: 3429596
End: 3431821
Strand: Direct
Name: fbpB [H]
Synonym: Spro_3116
Alternate gene names: 157371355
Gene position: 3429596-3431821 (Clockwise)
Preceding gene: 157371354
Following gene: 157371356
Centisome position: 62.94
GC content: 61.68
Gene sequence:
>2226_bases ATGAATGCTCAAAACCGCCGCCTGGACGGGGCCCTCGTGCTGGGCGCACTGGCCGTATTGCTACTGCCCTGGTACAGCCA GGAAGCCGGGTTCTTCGACTTTGGCTGGCTGAGTACGCTGTGGCGGGATCAGGCCATTGCCCCCGCGCTGTGGCAAATAC TGACCTTTCAACGCCCCTGGCTGCTGATTGCCCTGCTGATGCTGCTGGTTTGCGCGCCGGCACGCCTGCTGCCGGTGAGC CGCCTGCGCTCGCAACTGCTGATGTGCGCCAGCGTCGTCGGCATCGTATTTTTGCTGTTTGAAGGCCACGCCATCGGCTA CAGCGGTTGGAACTGGCAGTGGAGCGAGCAGCTGTTCGGCACGCTCAGCGACGGCCAACCCGCCTTTGGCGCCGGTGCCA TTTTGCTGATCACCACCTTTTTGCTGTTGTTCTCTTTTGCACTGGCCGAACGCGGCGTGCTGAAGGGGGATGCCTTTGTG GTGGCCGCCATCGTGCTGTTGGTCGCGCTGGTGACCACTTTCGTGCTCTACCCGGTTCTGAGCATGTTTGTCTCCTCGGT ACAGGACGTGGATGGCTCGTTTAAACCCGACGGCCTGATCGCCAATATGCAGGATCCGGCCATCTGGAGCCTGGGTTGCC TGAAAGGCGGCAGTTGCGGTACCGCCTGGCGCACCCTGACCCTGGCGTTGATGACCGCCAGCGGTTCCACGCTGCTCGGC CTGGCTTTTGCGCTGGCCGCCACCCGCACGCCGCTGCCGTTCAAAAAAGGGCTGCGCCTGCTGACCGTACTGCCGATCAT CACGCCGCCGTTTGTGATTGGGCTGGCGCTGATGCTGCTGTTTGGCCGCGCGGGCGTGGTTACCGAACTGCTCGCCAGCC TGTTTGGCATCGAGCCAGGCCGATGGCTGTATGGCCTGACCGGCATCTGGATTGCTCAGGTGCTTTCCTTCACCCCGATC GCCTTCCTGGTGCTGATTGGCGTGGTGGAAGGGGTCAGCCCCTCGCTGGAAGAAGCCTCACAGACGCTGCGCGCCAACCG CTGGCGTACTTTCCGCTATGTTTCACTGCCGCTGATGGCCCCCGGTCTGGCCAACGCCTTCCTGATCAGCTTTATCGAAA GCATGGCGGACTTCGGCAATCCGATGGTGCTGGGGGGCAGCCACGGCGTGCTGTCGACCGAGATATTCTTCTCGGTGGTC GGTGCGCAAAACGATCCAAGCCGCGCCGCCGTCCTGGCGATCATCCTGCTGTGCTTCACCCTCAGTGCCTTTATCTTGCA GCGTTTGTGGCTGGCGGGGAAAAACTTCGCCACCGTCACCGGCAAAGGAGATTCCGGCACCCACTGTGGGCTGCCACGCG GCTTGCGCTATGCCGTTTACGCGTTAGTGATCCCCTGGGGGCTATTCACGCTGGTGGTCTACGGTATGATCCTGATCGGC GGTTTTGTGCAGTCCTGGGGGCTGGATAACAGCCTGACGCTGGCTCATTACGCCCGCGCCTTCGGTTTCCAATGGAACAG CGGCCAGATTGTCTGGACCGGGGTCGCCTGGAACTCGTTCTGGACCACGCTGGAGATCGCCCTGATCGCCGCGCCGCTTA CCGCCATTGTTGGCCTGCTCACCGCCTGGCTGATCGTGCGGCAGAAGTTTGCCGGTCGCCAAACCTTTGAGTTTATGTTG ATGCTCAGTTTTGCCATTCCCGGCACGGTGATCGGCGTCAGTTACATCATGGCGTATAACCTGCCGCCGCTGGAGATCAC CGGTACCGCACTGATCCTGGTGGCCTGCTTCGTGTTCCGTAATATGCCGGTCGGCGTGCGCGGTGGCATCGCCGCCATGA GCCAGCTGGATCGCAGCCTGGATGAAGCCTCGCTGACGCTACGCGCCAGCAGTTTCCGCACCCTGCGCAAAGTGATCCTG CCGCTGCTGAAACCCGCTATCAGCGCAGCTCTGGTTTATGCCTTTGTGCGAGCAATTACCTCGATCAGCGCGGTGATTTT CCTGGTCAGCGCTCAGTACAACATGGCCACCTCCTACATCGTCGGGCTGGTGGAAAACGGGGAATACGGCGTGGCTATCG CCTACTCCTCGGTGCTTATCGTGGTGATGCTGGCGGTGATCCTCAGCTTCCAGTTGCTGGTGGGCGAACGTCGCCTGCGC CGCGCAATAACTGCTACCCCGCCGGTGACGCCACCCGCGGCCTTACATCAGGAGAATGCCTTATGA
Upstream 100 bases:
>100_bases CTTTTTCTGCCGTATGTGAAGCGCTCTGCAATAAAGCGGGCGAGGATATCCTCGTCCGTGCAACAGCGCAGTGACGGAAA TATGAACTCTCGAGGTTATG
Downstream 100 bases:
>100_bases CTGCCATTCGCTCCGGCTCGGTGGTGTTTGAGAACGTCACCAAACAGTTTGCCGACTTCACTGCCCTGCCCGGCCTTTCG CTCACCGTCGAACCCGGCAC
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 741; Mature: 741
Protein sequence:
>741_residues MNAQNRRLDGALVLGALAVLLLPWYSQEAGFFDFGWLSTLWRDQAIAPALWQILTFQRPWLLIALLMLLVCAPARLLPVS RLRSQLLMCASVVGIVFLLFEGHAIGYSGWNWQWSEQLFGTLSDGQPAFGAGAILLITTFLLLFSFALAERGVLKGDAFV VAAIVLLVALVTTFVLYPVLSMFVSSVQDVDGSFKPDGLIANMQDPAIWSLGCLKGGSCGTAWRTLTLALMTASGSTLLG LAFALAATRTPLPFKKGLRLLTVLPIITPPFVIGLALMLLFGRAGVVTELLASLFGIEPGRWLYGLTGIWIAQVLSFTPI AFLVLIGVVEGVSPSLEEASQTLRANRWRTFRYVSLPLMAPGLANAFLISFIESMADFGNPMVLGGSHGVLSTEIFFSVV GAQNDPSRAAVLAIILLCFTLSAFILQRLWLAGKNFATVTGKGDSGTHCGLPRGLRYAVYALVIPWGLFTLVVYGMILIG GFVQSWGLDNSLTLAHYARAFGFQWNSGQIVWTGVAWNSFWTTLEIALIAAPLTAIVGLLTAWLIVRQKFAGRQTFEFML MLSFAIPGTVIGVSYIMAYNLPPLEITGTALILVACFVFRNMPVGVRGGIAAMSQLDRSLDEASLTLRASSFRTLRKVIL PLLKPAISAALVYAFVRAITSISAVIFLVSAQYNMATSYIVGLVENGEYGVAIAYSSVLIVVMLAVILSFQLLVGERRLR RAITATPPVTPPAALHQENAL
Sequences:
>Translated_741_residues MNAQNRRLDGALVLGALAVLLLPWYSQEAGFFDFGWLSTLWRDQAIAPALWQILTFQRPWLLIALLMLLVCAPARLLPVS RLRSQLLMCASVVGIVFLLFEGHAIGYSGWNWQWSEQLFGTLSDGQPAFGAGAILLITTFLLLFSFALAERGVLKGDAFV VAAIVLLVALVTTFVLYPVLSMFVSSVQDVDGSFKPDGLIANMQDPAIWSLGCLKGGSCGTAWRTLTLALMTASGSTLLG LAFALAATRTPLPFKKGLRLLTVLPIITPPFVIGLALMLLFGRAGVVTELLASLFGIEPGRWLYGLTGIWIAQVLSFTPI AFLVLIGVVEGVSPSLEEASQTLRANRWRTFRYVSLPLMAPGLANAFLISFIESMADFGNPMVLGGSHGVLSTEIFFSVV GAQNDPSRAAVLAIILLCFTLSAFILQRLWLAGKNFATVTGKGDSGTHCGLPRGLRYAVYALVIPWGLFTLVVYGMILIG GFVQSWGLDNSLTLAHYARAFGFQWNSGQIVWTGVAWNSFWTTLEIALIAAPLTAIVGLLTAWLIVRQKFAGRQTFEFML MLSFAIPGTVIGVSYIMAYNLPPLEITGTALILVACFVFRNMPVGVRGGIAAMSQLDRSLDEASLTLRASSFRTLRKVIL PLLKPAISAALVYAFVRAITSISAVIFLVSAQYNMATSYIVGLVENGEYGVAIAYSSVLIVVMLAVILSFQLLVGERRLR RAITATPPVTPPAALHQENAL >Mature_741_residues MNAQNRRLDGALVLGALAVLLLPWYSQEAGFFDFGWLSTLWRDQAIAPALWQILTFQRPWLLIALLMLLVCAPARLLPVS RLRSQLLMCASVVGIVFLLFEGHAIGYSGWNWQWSEQLFGTLSDGQPAFGAGAILLITTFLLLFSFALAERGVLKGDAFV VAAIVLLVALVTTFVLYPVLSMFVSSVQDVDGSFKPDGLIANMQDPAIWSLGCLKGGSCGTAWRTLTLALMTASGSTLLG LAFALAATRTPLPFKKGLRLLTVLPIITPPFVIGLALMLLFGRAGVVTELLASLFGIEPGRWLYGLTGIWIAQVLSFTPI AFLVLIGVVEGVSPSLEEASQTLRANRWRTFRYVSLPLMAPGLANAFLISFIESMADFGNPMVLGGSHGVLSTEIFFSVV GAQNDPSRAAVLAIILLCFTLSAFILQRLWLAGKNFATVTGKGDSGTHCGLPRGLRYAVYALVIPWGLFTLVVYGMILIG GFVQSWGLDNSLTLAHYARAFGFQWNSGQIVWTGVAWNSFWTTLEIALIAAPLTAIVGLLTAWLIVRQKFAGRQTFEFML MLSFAIPGTVIGVSYIMAYNLPPLEITGTALILVACFVFRNMPVGVRGGIAAMSQLDRSLDEASLTLRASSFRTLRKVIL PLLKPAISAALVYAFVRAITSISAVIFLVSAQYNMATSYIVGLVENGEYGVAIAYSSVLIVVMLAVILSFQLLVGERRLR RAITATPPVTPPAALHQENAL
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=194, Percent_Identity=26.8041237113402, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI87082099, Length=158, Percent_Identity=32.9113924050633, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1787570, Length=238, Percent_Identity=26.0504201680672, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1786254, Length=203, Percent_Identity=27.5862068965517, Blast_Score=63, Evalue=8e-11, Organism=Escherichia coli, GI1787368, Length=223, Percent_Identity=25.1121076233184, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 80076; Mature: 80076
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAQNRRLDGALVLGALAVLLLPWYSQEAGFFDFGWLSTLWRDQAIAPALWQILTFQRPW CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHH LLIALLMLLVCAPARLLPVSRLRSQLLMCASVVGIVFLLFEGHAIGYSGWNWQWSEQLFG HHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEHHHHHH TLSDGQPAFGAGAILLITTFLLLFSFALAERGVLKGDAFVVAAIVLLVALVTTFVLYPVL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SMFVSSVQDVDGSFKPDGLIANMQDPAIWSLGCLKGGSCGTAWRTLTLALMTASGSTLLG HHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHH LAFALAATRTPLPFKKGLRLLTVLPIITPPFVIGLALMLLFGRAGVVTELLASLFGIEPG HHHHHHHCCCCCCHHHCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC RWLYGLTGIWIAQVLSFTPIAFLVLIGVVEGVSPSLEEASQTLRANRWRTFRYVSLPLMA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEECCCCC PGLANAFLISFIESMADFGNPMVLGGSHGVLSTEIFFSVVGAQNDPSRAAVLAIILLCFT CCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LSAFILQRLWLAGKNFATVTGKGDSGTHCGLPRGLRYAVYALVIPWGLFTLVVYGMILIG HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GFVQSWGLDNSLTLAHYARAFGFQWNSGQIVWTGVAWNSFWTTLEIALIAAPLTAIVGLL HHHHHCCCCCCHHHHHHHHHHCCEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH TAWLIVRQKFAGRQTFEFMLMLSFAIPGTVIGVSYIMAYNLPPLEITGTALILVACFVFR HHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH NMPVGVRGGIAAMSQLDRSLDEASLTLRASSFRTLRKVILPLLKPAISAALVYAFVRAIT CCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SISAVIFLVSAQYNMATSYIVGLVENGEYGVAIAYSSVLIVVMLAVILSFQLLVGERRLR HHHHHHHHHHCCHHHHHHHHEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAITATPPVTPPAALHQENAL HHHCCCCCCCCCHHHCCCCCC >Mature Secondary Structure MNAQNRRLDGALVLGALAVLLLPWYSQEAGFFDFGWLSTLWRDQAIAPALWQILTFQRPW CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHH LLIALLMLLVCAPARLLPVSRLRSQLLMCASVVGIVFLLFEGHAIGYSGWNWQWSEQLFG HHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEHHHHHH TLSDGQPAFGAGAILLITTFLLLFSFALAERGVLKGDAFVVAAIVLLVALVTTFVLYPVL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SMFVSSVQDVDGSFKPDGLIANMQDPAIWSLGCLKGGSCGTAWRTLTLALMTASGSTLLG HHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHH LAFALAATRTPLPFKKGLRLLTVLPIITPPFVIGLALMLLFGRAGVVTELLASLFGIEPG HHHHHHHCCCCCCHHHCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC RWLYGLTGIWIAQVLSFTPIAFLVLIGVVEGVSPSLEEASQTLRANRWRTFRYVSLPLMA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEECCCCC PGLANAFLISFIESMADFGNPMVLGGSHGVLSTEIFFSVVGAQNDPSRAAVLAIILLCFT CCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LSAFILQRLWLAGKNFATVTGKGDSGTHCGLPRGLRYAVYALVIPWGLFTLVVYGMILIG HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GFVQSWGLDNSLTLAHYARAFGFQWNSGQIVWTGVAWNSFWTTLEIALIAAPLTAIVGLL HHHHHCCCCCCHHHHHHHHHHCCEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH TAWLIVRQKFAGRQTFEFMLMLSFAIPGTVIGVSYIMAYNLPPLEITGTALILVACFVFR HHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH NMPVGVRGGIAAMSQLDRSLDEASLTLRASSFRTLRKVILPLLKPAISAALVYAFVRAIT CCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SISAVIFLVSAQYNMATSYIVGLVENGEYGVAIAYSSVLIVVMLAVILSFQLLVGERRLR HHHHHHHHHHCCHHHHHHHHEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAITATPPVTPPAALHQENAL HHHCCCCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8807793 [H]