| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yjcS [H]
Identifier: 157371351
GI number: 157371351
Start: 3424207
End: 3426186
Strand: Direct
Name: yjcS [H]
Synonym: Spro_3112
Alternate gene names: 157371351
Gene position: 3424207-3426186 (Clockwise)
Preceding gene: 157371349
Following gene: 157371352
Centisome position: 62.84
GC content: 49.9
Gene sequence:
>1980_bases ATGAGACTTACGTTGATCGTCAAAAGTCTTGCACTGGCAGGGTTCCTCTCTTCCAGCGCACTGACACCTTTGTTCGCGCA GGAAGCACCAAAAGGTGCCACCGCGTCAACAAAGCAAGCTAACGATGCACTTTATAACCAGCTTCCTTTCTCCGATAACA CCGATTTCACGAATGCCCACAAAGGCTTTATCGCCGCTTTACCTCAGGAGGTGATTAAAGGCGAGCAGGGAAATGTTATC TGGAACCCACAACAGTATGCATTTATCAAAGAAGGGGAAAAATCCCCTGACACTGTAAACCCGAGCCTTTGGCGACAGTC TCAGTTGATCAATATCAGCGGTCTGTTTGAAGTGACTGAGGGTGTTTACCAGATCCGTAACCTTGATTTATCCAACATGA CCATCATTGAGGGTAAAGAAGGGATTACAGTCGTTGACCCGCTGGTTTCAGCAGAAACAGCAAAAGTCGGCATGGATTTG TACTTCAAAAATCGCGGTAATAAACCCGTTGTCGCCATCATTTATACCCATAGCCACGTTGACCACTATGGCGGCGTGCG TGGTGTGGTAGACGAAGCGGATGTTAAGTCCGGGAAGGTAAAAGTTTATGCACCAGCAGGCTTTATGGAAGCTGCTGTAG CCGAGAATATTATGGCCGGTAACGTTATGAGCCGCCGTGCCAGCTATATGTATGGCAACCTCCTTAAACCCGAAGCTACT GGCCAGGTGGGGGCGGGTCTGGGGACAACCACCTCAGCAGGTACTGTGACGCTGATTGCACCAACTAACATCATCGATAA AGACGGCCAGAAAGAAGTGATTGACGGTCTGACTTACGATTTTATGTTGGCGCCGGGTTCCGAAGCACCGTCTGAAATGC TGTGGTTCATCGAAGAGAAGAAACTCATCGAAGCCGCAGAGGATGTGACTCACACCCTGCACAATACCTACTCGTTGCGC GGCGCGAAAATTCGAGAACCATTGCCGTGGTCGAAATACATCAACGAAGCCATAGTGCGTTGGGGTGACAAAGCTGAAAT TATTATGGCTCAGCACCACTGGCCGACCTGGGGTAACGAAAACGTTGTTGGCCTGCTGAAAAGCCAGCGTGACTTGTATC GTTATATCAACGACCAGACCCTGCGTATGGCCAACGAAGGCCTGACACGCGATGAAATTGCTGCCAACTTCAAACTGCCA GACAGCCTGGCGAAGACCTGGGCTAACCGCGGCTATTACGGCTCCATCAGCCATGACGTGAAAGCAACGTATGTGCTGTA TCTCGGCTGGTTCGATGGCAACCCGGCAACGCTTGATGAATTACCGCCGGAAGAAGCAGCGAAGAAATTTGTTGAATACA TGGGCGGTGCCGATGCGATTCTTCAGAAAGCAAAAACCGACTTTGACCAGGGTAACTACCGTTGGGTTGCTCAGGTGGTT AGTAAAGTGGTGTTTGCCGATCCAAATAACCAGAATGCGCGTAACCTGGAAGCGGATGCACTGGAACAACTGGGTTACCA GGCTGAGTCCGGCCCATGGCGTAACTTCTACCTGACCGGTGCTCAGGAGTTGCGCAATGGTGTGGTTAAAGGCCCAACAC CTAATACAGCAAGCCCGGATACCGTTCGCGCGATGACGCCTGAAATGTTCTTCGATTTCCTGGCGGTACATATCAACGGT GAAAAAGCGGGTAATGCCAAAGCGGTGTTTAATATCGACCTGGGCAGCGATGGCGGTAAATACAAGCTGGAGCTGGAAAA CGGAGTACTGAACCATACTGCTAATGCTGAAGCGAAAGACGCTGATGCCACGATTGTTCTGAACCGCGACACGCTTAATA AAATCATCCTGAAAGAAGAAACCCTGAAACAGGCTGAAGATAAAGGCGAGGTTAAGGTCACCGGTAACGGTGCGAAGCTC AATGAGATGTTGGGCTATATGGACAAGTTCGAGTTCTGGTTCAATATCGTTACACCATAA
Upstream 100 bases:
>100_bases GACCAGTGGCCATTTTAATTATTTGAATTAATTAATAATTTCAAGAAGTAATTATTTGATAAGGCTGAGTAGTTATAAGG TTTTCACATGGGGGTTACAA
Downstream 100 bases:
>100_bases ATAATTCCCCCTGTGGCGTCACGGCTGCAGGGGACTTACTTAAGGTAATCCTATGCGTCTTTCATACTCGATTTTGCCTT CAATATTATGCCTTGCTTCA
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 659; Mature: 659
Protein sequence:
>659_residues MRLTLIVKSLALAGFLSSSALTPLFAQEAPKGATASTKQANDALYNQLPFSDNTDFTNAHKGFIAALPQEVIKGEQGNVI WNPQQYAFIKEGEKSPDTVNPSLWRQSQLINISGLFEVTEGVYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKVGMDL YFKNRGNKPVVAIIYTHSHVDHYGGVRGVVDEADVKSGKVKVYAPAGFMEAAVAENIMAGNVMSRRASYMYGNLLKPEAT GQVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDGLTYDFMLAPGSEAPSEMLWFIEEKKLIEAAEDVTHTLHNTYSLR GAKIREPLPWSKYINEAIVRWGDKAEIIMAQHHWPTWGNENVVGLLKSQRDLYRYINDQTLRMANEGLTRDEIAANFKLP DSLAKTWANRGYYGSISHDVKATYVLYLGWFDGNPATLDELPPEEAAKKFVEYMGGADAILQKAKTDFDQGNYRWVAQVV SKVVFADPNNQNARNLEADALEQLGYQAESGPWRNFYLTGAQELRNGVVKGPTPNTASPDTVRAMTPEMFFDFLAVHING EKAGNAKAVFNIDLGSDGGKYKLELENGVLNHTANAEAKDADATIVLNRDTLNKIILKEETLKQAEDKGEVKVTGNGAKL NEMLGYMDKFEFWFNIVTP
Sequences:
>Translated_659_residues MRLTLIVKSLALAGFLSSSALTPLFAQEAPKGATASTKQANDALYNQLPFSDNTDFTNAHKGFIAALPQEVIKGEQGNVI WNPQQYAFIKEGEKSPDTVNPSLWRQSQLINISGLFEVTEGVYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKVGMDL YFKNRGNKPVVAIIYTHSHVDHYGGVRGVVDEADVKSGKVKVYAPAGFMEAAVAENIMAGNVMSRRASYMYGNLLKPEAT GQVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDGLTYDFMLAPGSEAPSEMLWFIEEKKLIEAAEDVTHTLHNTYSLR GAKIREPLPWSKYINEAIVRWGDKAEIIMAQHHWPTWGNENVVGLLKSQRDLYRYINDQTLRMANEGLTRDEIAANFKLP DSLAKTWANRGYYGSISHDVKATYVLYLGWFDGNPATLDELPPEEAAKKFVEYMGGADAILQKAKTDFDQGNYRWVAQVV SKVVFADPNNQNARNLEADALEQLGYQAESGPWRNFYLTGAQELRNGVVKGPTPNTASPDTVRAMTPEMFFDFLAVHING EKAGNAKAVFNIDLGSDGGKYKLELENGVLNHTANAEAKDADATIVLNRDTLNKIILKEETLKQAEDKGEVKVTGNGAKL NEMLGYMDKFEFWFNIVTP >Mature_659_residues MRLTLIVKSLALAGFLSSSALTPLFAQEAPKGATASTKQANDALYNQLPFSDNTDFTNAHKGFIAALPQEVIKGEQGNVI WNPQQYAFIKEGEKSPDTVNPSLWRQSQLINISGLFEVTEGVYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKVGMDL YFKNRGNKPVVAIIYTHSHVDHYGGVRGVVDEADVKSGKVKVYAPAGFMEAAVAENIMAGNVMSRRASYMYGNLLKPEAT GQVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDGLTYDFMLAPGSEAPSEMLWFIEEKKLIEAAEDVTHTLHNTYSLR GAKIREPLPWSKYINEAIVRWGDKAEIIMAQHHWPTWGNENVVGLLKSQRDLYRYINDQTLRMANEGLTRDEIAANFKLP DSLAKTWANRGYYGSISHDVKATYVLYLGWFDGNPATLDELPPEEAAKKFVEYMGGADAILQKAKTDFDQGNYRWVAQVV SKVVFADPNNQNARNLEADALEQLGYQAESGPWRNFYLTGAQELRNGVVKGPTPNTASPDTVRAMTPEMFFDFLAVHING EKAGNAKAVFNIDLGSDGGKYKLELENGVLNHTANAEAKDADATIVLNRDTLNKIILKEETLKQAEDKGEVKVTGNGAKL NEMLGYMDKFEFWFNIVTP
Specific function: Unknown
COG id: COG2015
COG function: function code Q; Alkyl sulfatase and related hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082368, Length=660, Percent_Identity=47.4242424242424, Blast_Score=633, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6324409, Length=634, Percent_Identity=50, Blast_Score=650, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR003033 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 72556; Mature: 72556
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTLIVKSLALAGFLSSSALTPLFAQEAPKGATASTKQANDALYNQLPFSDNTDFTNAH CEEEHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC KGFIAALPQEVIKGEQGNVIWNPQQYAFIKEGEKSPDTVNPSLWRQSQLINISGLFEVTE CCHHHHCCHHHHCCCCCCEEECCCCEEEEECCCCCCCCCCHHHHCCCEEEEEHHHHHHHH GVYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKVGMDLYFKNRGNKPVVAIIYTHSHV HHHHHHCCCCCCEEEEECCCCCEEECCHHCCCHHHCCEEEEEECCCCCCEEEEEEEECCC DHYGGVRGVVDEADVKSGKVKVYAPAGFMEAAVAENIMAGNVMSRRASYMYGNLLKPEAT HHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCC GQVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDGLTYDFMLAPGSEAPSEMLWFIEEK CCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHH KLIEAAEDVTHTLHNTYSLRGAKIREPLPWSKYINEAIVRWGDKAEIIMAQHHWPTWGNE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC NVVGLLKSQRDLYRYINDQTLRMANEGLTRDEIAANFKLPDSLAKTWANRGYYGSISHDV CEEEEHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHCCCEEECCCCCC KATYVLYLGWFDGNPATLDELPPEEAAKKFVEYMGGADAILQKAKTDFDQGNYRWVAQVV EEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHH SKVVFADPNNQNARNLEADALEQLGYQAESGPWRNFYLTGAQELRNGVVKGPTPNTASPD HHHEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECHHHHHCCCCCCCCCCCCCCC TVRAMTPEMFFDFLAVHINGEKAGNAKAVFNIDLGSDGGKYKLELENGVLNHTANAEAKD HHHHCCHHHHHEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCC ADATIVLNRDTLNKIILKEETLKQAEDKGEVKVTGNGAKLNEMLGYMDKFEFWFNIVTP CCEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHEEEEEEECCC >Mature Secondary Structure MRLTLIVKSLALAGFLSSSALTPLFAQEAPKGATASTKQANDALYNQLPFSDNTDFTNAH CEEEHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC KGFIAALPQEVIKGEQGNVIWNPQQYAFIKEGEKSPDTVNPSLWRQSQLINISGLFEVTE CCHHHHCCHHHHCCCCCCEEECCCCEEEEECCCCCCCCCCHHHHCCCEEEEEHHHHHHHH GVYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKVGMDLYFKNRGNKPVVAIIYTHSHV HHHHHHCCCCCCEEEEECCCCCEEECCHHCCCHHHCCEEEEEECCCCCCEEEEEEEECCC DHYGGVRGVVDEADVKSGKVKVYAPAGFMEAAVAENIMAGNVMSRRASYMYGNLLKPEAT HHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCC GQVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDGLTYDFMLAPGSEAPSEMLWFIEEK CCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHH KLIEAAEDVTHTLHNTYSLRGAKIREPLPWSKYINEAIVRWGDKAEIIMAQHHWPTWGNE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC NVVGLLKSQRDLYRYINDQTLRMANEGLTRDEIAANFKLPDSLAKTWANRGYYGSISHDV CEEEEHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHCCCEEECCCCCC KATYVLYLGWFDGNPATLDELPPEEAAKKFVEYMGGADAILQKAKTDFDQGNYRWVAQVV EEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHH SKVVFADPNNQNARNLEADALEQLGYQAESGPWRNFYLTGAQELRNGVVKGPTPNTASPD HHHEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECHHHHHCCCCCCCCCCCCCCC TVRAMTPEMFFDFLAVHINGEKAGNAKAVFNIDLGSDGGKYKLELENGVLNHTANAEAKD HHHHCCHHHHHEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCC ADATIVLNRDTLNKIILKEETLKQAEDKGEVKVTGNGAKLNEMLGYMDKFEFWFNIVTP CCEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503 [H]