Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is 157371307

Identifier: 157371307

GI number: 157371307

Start: 3376402

End: 3376542

Strand: Direct

Name: 157371307

Synonym: Spro_3067

Alternate gene names: NA

Gene position: 3376402-3376542 (Clockwise)

Preceding gene: 157371304

Following gene: 157371308

Centisome position: 61.97

GC content: 43.26

Gene sequence:

>141_bases
ATGATAAAAGAAATTGATATTCGCCGAGGAAGACACTGTACTTTCCTGATGCAGGTTCACTTGGTCTTTGTTGCCAAGTA
TCGGCGCAAAGTATTTGATCAGGATGCGATTGAGAAGCTACGCAGCTACTTTTGCCAGTAG

Upstream 100 bases:

>100_bases
CCAGCGAAGCGCCGCATATCGCGGACCTGCTGACCATTGGGTCTTAACTGGAATTTGAAGGCTTGAAGTCGTTTCATACT
TCAAATTTTACTCTTGGCCT

Downstream 100 bases:

>100_bases
CTGCGGTGGAGCACCAATATCGATCATCCGGCAATACATCAAGCAATAGCAAACACCAGGTTAGGTAGAAAACCGTGCCT
TATACCCCCGCCCTGAAGGA

Product: putative transposase

Products: NA

Alternate protein names: Transposase TnA; LOW QUALITY PROTEIN IS Element Transposase; IS Element Transposase; Transposase ORF A

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MIKEIDIRRGRHCTFLMQVHLVFVAKYRRKVFDQDAIEKLRSYFCQ

Sequences:

>Translated_46_residues
MIKEIDIRRGRHCTFLMQVHLVFVAKYRRKVFDQDAIEKLRSYFCQ
>Mature_46_residues
MIKEIDIRRGRHCTFLMQVHLVFVAKYRRKVFDQDAIEKLRSYFCQ

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5690; Mature: 5690

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKEIDIRRGRHCTFLMQVHLVFVAKYRRKVFDQDAIEKLRSYFCQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIKEIDIRRGRHCTFLMQVHLVFVAKYRRKVFDQDAIEKLRSYFCQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA