| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157371307
Identifier: 157371307
GI number: 157371307
Start: 3376402
End: 3376542
Strand: Direct
Name: 157371307
Synonym: Spro_3067
Alternate gene names: NA
Gene position: 3376402-3376542 (Clockwise)
Preceding gene: 157371304
Following gene: 157371308
Centisome position: 61.97
GC content: 43.26
Gene sequence:
>141_bases ATGATAAAAGAAATTGATATTCGCCGAGGAAGACACTGTACTTTCCTGATGCAGGTTCACTTGGTCTTTGTTGCCAAGTA TCGGCGCAAAGTATTTGATCAGGATGCGATTGAGAAGCTACGCAGCTACTTTTGCCAGTAG
Upstream 100 bases:
>100_bases CCAGCGAAGCGCCGCATATCGCGGACCTGCTGACCATTGGGTCTTAACTGGAATTTGAAGGCTTGAAGTCGTTTCATACT TCAAATTTTACTCTTGGCCT
Downstream 100 bases:
>100_bases CTGCGGTGGAGCACCAATATCGATCATCCGGCAATACATCAAGCAATAGCAAACACCAGGTTAGGTAGAAAACCGTGCCT TATACCCCCGCCCTGAAGGA
Product: putative transposase
Products: NA
Alternate protein names: Transposase TnA; LOW QUALITY PROTEIN IS Element Transposase; IS Element Transposase; Transposase ORF A
Number of amino acids: Translated: 46; Mature: 46
Protein sequence:
>46_residues MIKEIDIRRGRHCTFLMQVHLVFVAKYRRKVFDQDAIEKLRSYFCQ
Sequences:
>Translated_46_residues MIKEIDIRRGRHCTFLMQVHLVFVAKYRRKVFDQDAIEKLRSYFCQ >Mature_46_residues MIKEIDIRRGRHCTFLMQVHLVFVAKYRRKVFDQDAIEKLRSYFCQ
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5690; Mature: 5690
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKEIDIRRGRHCTFLMQVHLVFVAKYRRKVFDQDAIEKLRSYFCQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MIKEIDIRRGRHCTFLMQVHLVFVAKYRRKVFDQDAIEKLRSYFCQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA