Click here to switch to the map view.

The map label for this gene is ytxE [H]

Identifier: 157371239

GI number: 157371239

Start: 3296470

End: 3297690

Strand: Direct

Name: ytxE [H]

Synonym: Spro_2999

Alternate gene names: 157371239

Gene position: 3296470-3297690 (Clockwise)

Preceding gene: 157371238

Following gene: 157371240

Centisome position: 60.5

GC content: 59.79

Gene sequence:

>1221_bases
ATGACTCAGGAAAATAACATAACGCCGGCAGGCAACCCGTTGGTAGAAGCCGCGAACCCTTTGCTGAACGCCATTTCGCA
AATCCGCCAATCGGCCACCCACGCCAATCCGGCGCAGCTGCGCCAGCAACTGATCGATAAAGTTCGCCACTTCGAACTCC
AGGGTCAGCGCGCCAACCTGCCGTATGAAGTGATTATCGGCGCACGTTATTGCCTGTGTACCGCGCTGGACGAAGCCGCC
GCGCTAACGCCCTGGGGCAGCAGCAGCGTCTGGTCCGGCAGCGGACTGTTGGTGACTTTCCACAACGAAACCTGGGGCGG
AGAGAAGTTCTTCCAACTGCTGGCCAAGCTGTCGCAAAGCCCACGCGAACACATCCAACTGCTGGAACTGATTAACTTCT
GCCTGCTGCTGGGGTTCGAAGGCCGCTATCGAGTGATGGAGAACGGCCGCTCGCAGTTGGAAACCATGAAGCAACGTCTG
CTGCAACTGATCCGCTCGGTACGCGGCGGTTACGCCCCGCCACTGTCCCCCAACGCACTGGATCTGCCGGTACAGCAAAA
ATTGTGGCGCCCTCTGGTGCCATTATGGGCCTGCGTAGCACTGACCGGTTTTCTGGCGTCGTTGCTGTTTATCGGCCTCA
ACTGGCGGCTGGGCGACAGCACCAGTCCGGTGCTGGCAGCCATTTATCAGACCAACCTGCCACAGGTTGCCATCAGCAAT
CCGGCACCGGCGGCACCACCGACGCTGAGCCTGAAAAGCTTCCTGCGCAAAGAAATTGCCGAAGGTCTGGTGGTGGTGCG
TGACGAAGCTCAGCAGAGCGTGGTGATCCTGAAAGGGGATGGCCTGTTCGACTCCGCCGCAACGACGGTGCGCGGCAACT
ATATCCCGGTCATTGACCGCATTGCCGCGGCGATGAACGGCGTCAGCGGCAAGATCCTGGTCACCGGCTACAGCGATAAT
CTGCCGATCCGCAGCGCACGCTTCGCTTCCAACTGGGAGTTGTCGCTGGCACGCGCCGACGCGGTCAGCGCCCAACTGCA
GAAACACCTCGACAACCCGCAACGGGTGAAGGCGGAAGGCCGCGGTGAAAGCAACCCGGTCGCACCGAACAATAGCAAAG
TGAACCGCGCGCTGAATCGCCGGGTAGAAATTACGCTGTTGGTTGCGCCAGAAAATACCCAGGCGGAAATCAACGGCTTG
CCGCAAGGAAACGGAAAGTAA

Upstream 100 bases:

>100_bases
GATGGAAAAATCCAGCGCCTTCGCTCTGCACCTGGCCGGCGACTTCCCGGGTCTGGATATGGAATTCTGGGCGATTCGCA
GCCATACGGACCGGTAACCT

Downstream 100 bases:

>100_bases
TGCTCAGTACGTTATTCTCCATCATCACCAGCCGCCTGTTATGGGGCTTTGCCGGCATTACTGCGCTGGCGTTCATCATC
TGGATGATCGGCCCGTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MTQENNITPAGNPLVEAANPLLNAISQIRQSATHANPAQLRQQLIDKVRHFELQGQRANLPYEVIIGARYCLCTALDEAA
ALTPWGSSSVWSGSGLLVTFHNETWGGEKFFQLLAKLSQSPREHIQLLELINFCLLLGFEGRYRVMENGRSQLETMKQRL
LQLIRSVRGGYAPPLSPNALDLPVQQKLWRPLVPLWACVALTGFLASLLFIGLNWRLGDSTSPVLAAIYQTNLPQVAISN
PAPAAPPTLSLKSFLRKEIAEGLVVVRDEAQQSVVILKGDGLFDSAATTVRGNYIPVIDRIAAAMNGVSGKILVTGYSDN
LPIRSARFASNWELSLARADAVSAQLQKHLDNPQRVKAEGRGESNPVAPNNSKVNRALNRRVEITLLVAPENTQAEINGL
PQGNGK

Sequences:

>Translated_406_residues
MTQENNITPAGNPLVEAANPLLNAISQIRQSATHANPAQLRQQLIDKVRHFELQGQRANLPYEVIIGARYCLCTALDEAA
ALTPWGSSSVWSGSGLLVTFHNETWGGEKFFQLLAKLSQSPREHIQLLELINFCLLLGFEGRYRVMENGRSQLETMKQRL
LQLIRSVRGGYAPPLSPNALDLPVQQKLWRPLVPLWACVALTGFLASLLFIGLNWRLGDSTSPVLAAIYQTNLPQVAISN
PAPAAPPTLSLKSFLRKEIAEGLVVVRDEAQQSVVILKGDGLFDSAATTVRGNYIPVIDRIAAAMNGVSGKILVTGYSDN
LPIRSARFASNWELSLARADAVSAQLQKHLDNPQRVKAEGRGESNPVAPNNSKVNRALNRRVEITLLVAPENTQAEINGL
PQGNGK
>Mature_405_residues
TQENNITPAGNPLVEAANPLLNAISQIRQSATHANPAQLRQQLIDKVRHFELQGQRANLPYEVIIGARYCLCTALDEAAA
LTPWGSSSVWSGSGLLVTFHNETWGGEKFFQLLAKLSQSPREHIQLLELINFCLLLGFEGRYRVMENGRSQLETMKQRLL
QLIRSVRGGYAPPLSPNALDLPVQQKLWRPLVPLWACVALTGFLASLLFIGLNWRLGDSTSPVLAAIYQTNLPQVAISNP
APAAPPTLSLKSFLRKEIAEGLVVVRDEAQQSVVILKGDGLFDSAATTVRGNYIPVIDRIAAAMNGVSGKILVTGYSDNL
PIRSARFASNWELSLARADAVSAQLQKHLDNPQRVKAEGRGESNPVAPNNSKVNRALNRRVEITLLVAPENTQAEINGLP
QGNGK

Specific function: May be involved in some transport function [H]

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 44307; Mature: 44176

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQENNITPAGNPLVEAANPLLNAISQIRQSATHANPAQLRQQLIDKVRHFELQGQRANL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PYEVIIGARYCLCTALDEAAALTPWGSSSVWSGSGLLVTFHNETWGGEKFFQLLAKLSQS
CEEEECCCHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
PREHIQLLELINFCLLLGFEGRYRVMENGRSQLETMKQRLLQLIRSVRGGYAPPLSPNAL
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DLPVQQKLWRPLVPLWACVALTGFLASLLFIGLNWRLGDSTSPVLAAIYQTNLPQVAISN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCEEECC
PAPAAPPTLSLKSFLRKEIAEGLVVVRDEAQQSVVILKGDGLFDSAATTVRGNYIPVIDR
CCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCCHHHHHCCCCCHHHHH
IAAAMNGVSGKILVTGYSDNLPIRSARFASNWELSLARADAVSAQLQKHLDNPQRVKAEG
HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEHHCC
RGESNPVAPNNSKVNRALNRRVEITLLVAPENTQAEINGLPQGNGK
CCCCCCCCCCCHHHHHHHCCEEEEEEEECCCCCCHHCCCCCCCCCC
>Mature Secondary Structure 
TQENNITPAGNPLVEAANPLLNAISQIRQSATHANPAQLRQQLIDKVRHFELQGQRANL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PYEVIIGARYCLCTALDEAAALTPWGSSSVWSGSGLLVTFHNETWGGEKFFQLLAKLSQS
CEEEECCCHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
PREHIQLLELINFCLLLGFEGRYRVMENGRSQLETMKQRLLQLIRSVRGGYAPPLSPNAL
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DLPVQQKLWRPLVPLWACVALTGFLASLLFIGLNWRLGDSTSPVLAAIYQTNLPQVAISN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCEEECC
PAPAAPPTLSLKSFLRKEIAEGLVVVRDEAQQSVVILKGDGLFDSAATTVRGNYIPVIDR
CCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCCHHHHHCCCCCHHHHH
IAAAMNGVSGKILVTGYSDNLPIRSARFASNWELSLARADAVSAQLQKHLDNPQRVKAEG
HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEHHCC
RGESNPVAPNNSKVNRALNRRVEITLLVAPENTQAEINGLPQGNGK
CCCCCCCCCCCHHHHHHHCCEEEEEEEECCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]