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The map label for this gene is fliN [H]

Identifier: 157371195

GI number: 157371195

Start: 3255270

End: 3255683

Strand: Direct

Name: fliN [H]

Synonym: Spro_2955

Alternate gene names: 157371195

Gene position: 3255270-3255683 (Clockwise)

Preceding gene: 157371194

Following gene: 157371196

Centisome position: 59.74

GC content: 58.21

Gene sequence:

>414_bases
ATGAGTGATCCTAAGCAACCGTCTGGCGAAGGAAAGGAATCCGTGGACGACCTGTGGGCTGACGCGTTTAACGAGCAGCT
TGCCACCGACAAAACCTCTGCCAGCGACGCGGTATTCAAATCGCTGGAACCGCAGGATGCCAGCGGTAGCCTGCAGGATA
TCGATCTGATCCTGGATATCCCGGTCAAACTGACCGTCGAACTGGGCCGCACCAAAATGACCATCAAGGAGCTGCTGCGC
CTGTCGCAAGGCTCTGTCGTGGCGTTGGACGGGTTGGCGGGTGAACCCCTGGATATCATGATCAACGGTTATCTGATTGC
CCAGGGCGAAGTGGTGGTGGTGGCCGACAAGTTCGGCGTGCGCATCACCGACATCATTACCCCATCCGAACGTATGCGCC
GCCTGAGCCGCTGA

Upstream 100 bases:

>100_bases
TGCTAACCAGCCAATACGGCACGTTAAACGGGCAGTACGCCCTGCGTGTTGAACATTTGATTAACCCTATTTTGAATGCC
CTGAGTGAGGAACAGCCCAA

Downstream 100 bases:

>100_bases
TGAACCCAAACGCCACCGCGCCCGGTCAGGGCACCTTGCAACCCGCCACGCCGGCGTTACCGGCCGGTTCGGTGCTGACA
CAGGTCAGTACCGCACTCGG

Product: flagellar motor switch protein FliN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSDPKQPSGEGKESVDDLWADAFNEQLATDKTSASDAVFKSLEPQDASGSLQDIDLILDIPVKLTVELGRTKMTIKELLR
LSQGSVVALDGLAGEPLDIMINGYLIAQGEVVVVADKFGVRITDIITPSERMRRLSR

Sequences:

>Translated_137_residues
MSDPKQPSGEGKESVDDLWADAFNEQLATDKTSASDAVFKSLEPQDASGSLQDIDLILDIPVKLTVELGRTKMTIKELLR
LSQGSVVALDGLAGEPLDIMINGYLIAQGEVVVVADKFGVRITDIITPSERMRRLSR
>Mature_136_residues
SDPKQPSGEGKESVDDLWADAFNEQLATDKTSASDAVFKSLEPQDASGSLQDIDLILDIPVKLTVELGRTKMTIKELLRL
SQGSVVALDGLAGEPLDIMINGYLIAQGEVVVVADKFGVRITDIITPSERMRRLSR

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=137, Percent_Identity=74.4525547445255, Blast_Score=207, Evalue=2e-55,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 14872; Mature: 14741

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPKQPSGEGKESVDDLWADAFNEQLATDKTSASDAVFKSLEPQDASGSLQDIDLILDI
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEEC
PVKLTVELGRTKMTIKELLRLSQGSVVALDGLAGEPLDIMINGYLIAQGEVVVVADKFGV
CEEEEEEECCCHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEEEEECCCEEEEECCCCE
RITDIITPSERMRRLSR
EEEEEECCHHHHHHHCC
>Mature Secondary Structure 
SDPKQPSGEGKESVDDLWADAFNEQLATDKTSASDAVFKSLEPQDASGSLQDIDLILDI
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEEC
PVKLTVELGRTKMTIKELLRLSQGSVVALDGLAGEPLDIMINGYLIAQGEVVVVADKFGV
CEEEEEEECCCHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEEEEECCCEEEEECCCCE
RITDIITPSERMRRLSR
EEEEEECCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2656645; 11677609; 9324257 [H]