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The map label for this gene is fliD [H]

Identifier: 157371181

GI number: 157371181

Start: 3241575

End: 3242972

Strand: Direct

Name: fliD [H]

Synonym: Spro_2941

Alternate gene names: 157371181

Gene position: 3241575-3242972 (Clockwise)

Preceding gene: 157371173

Following gene: 157371182

Centisome position: 59.49

GC content: 52.22

Gene sequence:

>1398_bases
ATGGCATCGATCAGCTCATTAGGCATCGGCTCAGGACTCGACCTCAACGGCTTGCTGGACAAGCTAACCAAAGCGGAACA
GCAGCGACTGACGCCTTATACCACCCAGCAAACCAGCTATAACGCCCAACTGACGGCTTACGGCACCTTGAAAGGTTCGC
TGGAAAAGTTTGATAACTTGAGTAAAGAACTGGCGAAACCGGCATTTTTCAACAACACCACCGCCAGCAAGCACGACCAG
TTCTCCATCACTACCACCGACAAGGCAGTAGCGGGCAATTATAGCGTCGAGGTACTGAAACTGGCACAGCCGCAAACGCT
GACCACCCAAACCCCGATTGCCAATCAGACGGAAAAACTGGGCACCCCCGGTAGCAGCGATCGTTCCATTACCCTCACCG
CTGGGGACCCGCAGAAAGAAGTGAAGATCCCGCTGACCGACGACCAAACCTCACTGGTGGAAATGCGCGATGCCATTAAC
AACGCCAAAGCCGGCGTCAACGCCAGCATCATGCGGGTGGGCGACAACGACTATCAACTGGCAATCAGTTCCACCACTAC
CGGTGAAAAAAATACCGTCTCGGTCCAGGTCAATAATGACGATAAGTTGGGTGCTATCCTCAATTACGACAACAAGACCA
AAAGCGGTTCAATGAAGCAAACCGTGGCCGGCCAGGATGCAGAGATCAAGGTCAACGGCACGCCAATTAAACGCAGCACT
AACTCGATTGCCGATGCGTTGCAGGGCGTAACCATCGATCTGAAAACCACCACCAAGAAAGATGAACCGCAGAACCTGGT
GATCAGCACCGATAAAGCCGGCACCGCCACCAAGATTAAAGATTGGGTCGATAACTATAACTCGCTGCTGGATACCTTTA
ATTCGCTGAGCAAATATACCCCGGTCAAAACCGGCGAAGCGCAGAATGCCAAAAATGGCGCACTGCTGGGCGATAACACC
CTGCGTGGCATTCAGTCGTCGATTAAAAGCGCACTCAGCGGCGCGCAAGACAACCCCGAGCTGAAGGGCCTCGGCAATCT
GGGCATTACGACCAACACCAAAACCGGCAAGCTCGAGATCGACAGCACCAAGCTGAACAAAGCCATTGATGAGAAGCCGG
ACCAAGTCACCAACTTCTTCGCCGGCAACGGCAAAGACACCGGCATGGCGACCGAGATCCATAACGAGATCCAGAACTAC
ATCAAGGCCGGCGGCATCATCGAGAACTCGACCAAAAGCATCAATACCAACCTCGACCGCCTGAACAGCCAGATCACCAC
CGTCACCGCCAGTATTCAAAACACCATAGATCGCTATAAACAACAATTTGTTCAACTGGATACCATGATGTCCAAGTTGG
GCAGTACAGGTAATTATTTAACCCAACAGTTCAAATAA

Upstream 100 bases:

>100_bases
TTCTATTGCGCCATCGGTTTTTAAACTTTTCGGTAAACTTTTTCTCCACTGGGCCGATAACGCGTAAAGCGAATAAAGTC
ATAATCAAGGAGAATTACCA

Downstream 100 bases:

>100_bases
GAACTTTTTAACCAGGTAAGAAATCACATGTATAACCGAAGCGGAACTCAAGCCTACGCCCAGGTCAGTCTGGAAAGCGG
CGTAATGAGCGCCAGCCCGC

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MASISSLGIGSGLDLNGLLDKLTKAEQQRLTPYTTQQTSYNAQLTAYGTLKGSLEKFDNLSKELAKPAFFNNTTASKHDQ
FSITTTDKAVAGNYSVEVLKLAQPQTLTTQTPIANQTEKLGTPGSSDRSITLTAGDPQKEVKIPLTDDQTSLVEMRDAIN
NAKAGVNASIMRVGDNDYQLAISSTTTGEKNTVSVQVNNDDKLGAILNYDNKTKSGSMKQTVAGQDAEIKVNGTPIKRST
NSIADALQGVTIDLKTTTKKDEPQNLVISTDKAGTATKIKDWVDNYNSLLDTFNSLSKYTPVKTGEAQNAKNGALLGDNT
LRGIQSSIKSALSGAQDNPELKGLGNLGITTNTKTGKLEIDSTKLNKAIDEKPDQVTNFFAGNGKDTGMATEIHNEIQNY
IKAGGIIENSTKSINTNLDRLNSQITTVTASIQNTIDRYKQQFVQLDTMMSKLGSTGNYLTQQFK

Sequences:

>Translated_465_residues
MASISSLGIGSGLDLNGLLDKLTKAEQQRLTPYTTQQTSYNAQLTAYGTLKGSLEKFDNLSKELAKPAFFNNTTASKHDQ
FSITTTDKAVAGNYSVEVLKLAQPQTLTTQTPIANQTEKLGTPGSSDRSITLTAGDPQKEVKIPLTDDQTSLVEMRDAIN
NAKAGVNASIMRVGDNDYQLAISSTTTGEKNTVSVQVNNDDKLGAILNYDNKTKSGSMKQTVAGQDAEIKVNGTPIKRST
NSIADALQGVTIDLKTTTKKDEPQNLVISTDKAGTATKIKDWVDNYNSLLDTFNSLSKYTPVKTGEAQNAKNGALLGDNT
LRGIQSSIKSALSGAQDNPELKGLGNLGITTNTKTGKLEIDSTKLNKAIDEKPDQVTNFFAGNGKDTGMATEIHNEIQNY
IKAGGIIENSTKSINTNLDRLNSQITTVTASIQNTIDRYKQQFVQLDTMMSKLGSTGNYLTQQFK
>Mature_464_residues
ASISSLGIGSGLDLNGLLDKLTKAEQQRLTPYTTQQTSYNAQLTAYGTLKGSLEKFDNLSKELAKPAFFNNTTASKHDQF
SITTTDKAVAGNYSVEVLKLAQPQTLTTQTPIANQTEKLGTPGSSDRSITLTAGDPQKEVKIPLTDDQTSLVEMRDAINN
AKAGVNASIMRVGDNDYQLAISSTTTGEKNTVSVQVNNDDKLGAILNYDNKTKSGSMKQTVAGQDAEIKVNGTPIKRSTN
SIADALQGVTIDLKTTTKKDEPQNLVISTDKAGTATKIKDWVDNYNSLLDTFNSLSKYTPVKTGEAQNAKNGALLGDNTL
RGIQSSIKSALSGAQDNPELKGLGNLGITTNTKTGKLEIDSTKLNKAIDEKPDQVTNFFAGNGKDTGMATEIHNEIQNYI
KAGGIIENSTKSINTNLDRLNSQITTVTASIQNTIDRYKQQFVQLDTMMSKLGSTGNYLTQQFK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=467, Percent_Identity=42.1841541755889, Blast_Score=330, Evalue=1e-91,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 50017; Mature: 49886

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASISSLGIGSGLDLNGLLDKLTKAEQQRLTPYTTQQTSYNAQLTAYGTLKGSLEKFDNL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCHHHHHHHHH
SKELAKPAFFNNTTASKHDQFSITTTDKAVAGNYSVEVLKLAQPQTLTTQTPIANQTEKL
HHHHCCCCCCCCCCCCCCCEEEEEECCCEECCCCCEEEEEECCCCEEECCCCCCCCHHHC
GTPGSSDRSITLTAGDPQKEVKIPLTDDQTSLVEMRDAINNAKAGVNASIMRVGDNDYQL
CCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEE
AISSTTTGEKNTVSVQVNNDDKLGAILNYDNKTKSGSMKQTVAGQDAEIKVNGTPIKRST
EEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHCCCCCEEEECCCCCCCCH
NSIADALQGVTIDLKTTTKKDEPQNLVISTDKAGTATKIKDWVDNYNSLLDTFNSLSKYT
HHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PVKTGEAQNAKNGALLGDNTLRGIQSSIKSALSGAQDNPELKGLGNLGITTNTKTGKLEI
CCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCEEEE
DSTKLNKAIDEKPDQVTNFFAGNGKDTGMATEIHNEIQNYIKAGGIIENSTKSINTNLDR
CHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCHHCCCHHH
LNSQITTVTASIQNTIDRYKQQFVQLDTMMSKLGSTGNYLTQQFK
HCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC
>Mature Secondary Structure 
ASISSLGIGSGLDLNGLLDKLTKAEQQRLTPYTTQQTSYNAQLTAYGTLKGSLEKFDNL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCHHHHHHHHH
SKELAKPAFFNNTTASKHDQFSITTTDKAVAGNYSVEVLKLAQPQTLTTQTPIANQTEKL
HHHHCCCCCCCCCCCCCCCEEEEEECCCEECCCCCEEEEEECCCCEEECCCCCCCCHHHC
GTPGSSDRSITLTAGDPQKEVKIPLTDDQTSLVEMRDAINNAKAGVNASIMRVGDNDYQL
CCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEE
AISSTTTGEKNTVSVQVNNDDKLGAILNYDNKTKSGSMKQTVAGQDAEIKVNGTPIKRST
EEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHCCCCCEEEECCCCCCCCH
NSIADALQGVTIDLKTTTKKDEPQNLVISTDKAGTATKIKDWVDNYNSLLDTFNSLSKYT
HHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PVKTGEAQNAKNGALLGDNTLRGIQSSIKSALSGAQDNPELKGLGNLGITTNTKTGKLEI
CCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCEEEE
DSTKLNKAIDEKPDQVTNFFAGNGKDTGMATEIHNEIQNYIKAGGIIENSTKSINTNLDR
CHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCHHCCCHHH
LNSQITTVTASIQNTIDRYKQQFVQLDTMMSKLGSTGNYLTQQFK
HCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2193164; 11677609; 1527488; 9878359; 11118149 [H]