| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157371161
Identifier: 157371161
GI number: 157371161
Start: 3215597
End: 3216547
Strand: Reverse
Name: 157371161
Synonym: Spro_2921
Alternate gene names: NA
Gene position: 3216547-3215597 (Counterclockwise)
Preceding gene: 157371165
Following gene: 157371158
Centisome position: 59.03
GC content: 51.84
Gene sequence:
>951_bases ATGCTGGGTTGGCGTACTGGGCATTGGGATTTTCAAAGCGGTTCAATCATGAAATATATTATTTTATTGCTATTTATTTT GTGCGTTGTGTATGTCCATTACCGTGGCAGGGTGCGTTACACCTTCTGGCGGCAACTTTCCGATCATTCGACCTTCACTG CGCCATTGAACGTTTTTATGTATTTATTCTCACGCGTGCCGACCACGCCTTATCTGCCGCCGGAGCAATTTCCCGAGTTG AAGGTGCTGCGGGAGAATTGGCAAACCATACGCGATGAAGGGCAGCAGCTGATGGCGATCCAACAGATCAAAGCCTCGGA TCAATTTAATGACGCCGGATTCAATTCGTTTTTCAAAACCGGCTGGAAGCGCTTTTATTTAAAATGGTATGAAGACAGCC ACCCGTCGGCGATGAGCCTGTGTCCGCAGACCACGGCTTTGTTACGGAGCCTGCCTTCGGTCAAGGCGGCGATGTTTGCC GAACTGCCGGACGGCAGCCGCCTGCCGCGTCACCGCGACCCTTACGCCGGTTCGCTACGTTATCACCTGGGACTGATTAC CCCAAATGACGACCGCTGCTTTATCGAAGTGGATGGCGAGCGTTATAGCTGGCGTGATGGTGAGGGGGTGATGTTTGATG AGACCTATCTGCATTTCGCCGAAAACCAAAGTGGGCAAAACCGACTGATCCTGTTTTGTGATATCGAAAGACCGATGCGT TTCCGCTGGGCGCAGGGCATCAACCACTGGTTGGGGCGTAACCTGATGAGCGCGGCTACCGCACCCAATGAAGAAGGCGA TCGCACCGGTGGCGTCAACAAGCTGTTCAAGTACATTTATGCGGTGCGTAAAGTGGGCAAGCGGCTGAAGGCGTGGAACC GTACCGGGTATTACATCATTAAATGGATTTTGTTTGGTGGCATTGCGGCGGGTATTTTCTTCGCGATTTAA
Upstream 100 bases:
>100_bases TGTGGTTTTTTGTATAGATTTTAGTTGGGTTAGCGTTAATGCTTAGTGGTGTTCCAGACGGGCGAAGGGGTTCATCCGCC AAAAGGAAATATCTGGGAGT
Downstream 100 bases:
>100_bases ACTTTCGCGCTATAAAGGCGATGGGCGCCAACAGGGCGCCCATCGGTTAATCAGGCAAAGATAGTCATCATATAGGCGGC GAACAGTGCCAGGTGCGCAG
Product: aspartyl/asparaginyl beta-hydroxylase
Products: NA
Alternate protein names: Beta-Hydroxylase; Membrane-Bound Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Aspartyl-Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Peptide-Aspartate Beta-Dioxygenase; Hydroxylase; Lipid A-Myristate Beta-Hydroxylase; Fe(2+)/Alpha-Ketoglutarate-Dependent Dioxygenase LpxO; Peptide-Aspartate B-Dioxygenase; Peptide Aspartate B-Dioxygenase; Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Protein; Aspartate Beta-Hydroxylase; Aspartyl/Asparaginyl-Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Lipopolysaccharide Biosynthetic Protein; Beta-Hydroxylase Aspartyl/Asparaginyl Family
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MLGWRTGHWDFQSGSIMKYIILLLFILCVVYVHYRGRVRYTFWRQLSDHSTFTAPLNVFMYLFSRVPTTPYLPPEQFPEL KVLRENWQTIRDEGQQLMAIQQIKASDQFNDAGFNSFFKTGWKRFYLKWYEDSHPSAMSLCPQTTALLRSLPSVKAAMFA ELPDGSRLPRHRDPYAGSLRYHLGLITPNDDRCFIEVDGERYSWRDGEGVMFDETYLHFAENQSGQNRLILFCDIERPMR FRWAQGINHWLGRNLMSAATAPNEEGDRTGGVNKLFKYIYAVRKVGKRLKAWNRTGYYIIKWILFGGIAAGIFFAI
Sequences:
>Translated_316_residues MLGWRTGHWDFQSGSIMKYIILLLFILCVVYVHYRGRVRYTFWRQLSDHSTFTAPLNVFMYLFSRVPTTPYLPPEQFPEL KVLRENWQTIRDEGQQLMAIQQIKASDQFNDAGFNSFFKTGWKRFYLKWYEDSHPSAMSLCPQTTALLRSLPSVKAAMFA ELPDGSRLPRHRDPYAGSLRYHLGLITPNDDRCFIEVDGERYSWRDGEGVMFDETYLHFAENQSGQNRLILFCDIERPMR FRWAQGINHWLGRNLMSAATAPNEEGDRTGGVNKLFKYIYAVRKVGKRLKAWNRTGYYIIKWILFGGIAAGIFFAI >Mature_316_residues MLGWRTGHWDFQSGSIMKYIILLLFILCVVYVHYRGRVRYTFWRQLSDHSTFTAPLNVFMYLFSRVPTTPYLPPEQFPEL KVLRENWQTIRDEGQQLMAIQQIKASDQFNDAGFNSFFKTGWKRFYLKWYEDSHPSAMSLCPQTTALLRSLPSVKAAMFA ELPDGSRLPRHRDPYAGSLRYHLGLITPNDDRCFIEVDGERYSWRDGEGVMFDETYLHFAENQSGQNRLILFCDIERPMR FRWAQGINHWLGRNLMSAATAPNEEGDRTGGVNKLFKYIYAVRKVGKRLKAWNRTGYYIIKWILFGGIAAGIFFAI
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI194328779, Length=189, Percent_Identity=29.1005291005291, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36980; Mature: 36980
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGWRTGHWDFQSGSIMKYIILLLFILCVVYVHYRGRVRYTFWRQLSDHSTFTAPLNVFM CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCCHHHHHHHH YLFSRVPTTPYLPPEQFPELKVLRENWQTIRDEGQQLMAIQQIKASDQFNDAGFNSFFKT HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH GWKRFYLKWYEDSHPSAMSLCPQTTALLRSLPSVKAAMFAELPDGSRLPRHRDPYAGSLR HHHHEEEEEECCCCCHHHHHCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEE YHLGLITPNDDRCFIEVDGERYSWRDGEGVMFDETYLHFAENQSGQNRLILFCDIERPMR EEEEEEECCCCEEEEEECCCEECCCCCCCEEECHHHHHHHCCCCCCCEEEEEEECCCCHH FRWAQGINHWLGRNLMSAATAPNEEGDRTGGVNKLFKYIYAVRKVGKRLKAWNRTGYYII HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH KWILFGGIAAGIFFAI HHHHHHHHHHHHHHCC >Mature Secondary Structure MLGWRTGHWDFQSGSIMKYIILLLFILCVVYVHYRGRVRYTFWRQLSDHSTFTAPLNVFM CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCCHHHHHHHH YLFSRVPTTPYLPPEQFPELKVLRENWQTIRDEGQQLMAIQQIKASDQFNDAGFNSFFKT HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH GWKRFYLKWYEDSHPSAMSLCPQTTALLRSLPSVKAAMFAELPDGSRLPRHRDPYAGSLR HHHHEEEEEECCCCCHHHHHCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEE YHLGLITPNDDRCFIEVDGERYSWRDGEGVMFDETYLHFAENQSGQNRLILFCDIERPMR EEEEEEECCCCEEEEEECCCEECCCCCCCEEECHHHHHHHCCCCCCCEEEEEEECCCCHH FRWAQGINHWLGRNLMSAATAPNEEGDRTGGVNKLFKYIYAVRKVGKRLKAWNRTGYYII HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH KWILFGGIAAGIFFAI HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA