| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yhhW [C]
Identifier: 157371075
GI number: 157371075
Start: 3111308
End: 3112249
Strand: Reverse
Name: yhhW [C]
Synonym: Spro_2835
Alternate gene names: 157371075
Gene position: 3112249-3111308 (Counterclockwise)
Preceding gene: 157371076
Following gene: 157371074
Centisome position: 57.12
GC content: 52.87
Gene sequence:
>942_bases ATGAGCAATTCCCGCCCAACTCATTCTTCATCTTCCCGTGATTGTCCCGTGGTTGACGGTGTCCGTCAGATCCAACGTAT TGCCGTACGCAATGCCGAAGTCGGCGGCATAGGGATTAATCGTGCCTTACCTACCCGTGAGCGGCGCACCGTGGGTGCCT GGTGCTTTCTCGACCATGCCGGACCCTCGGTTTTCAGCGGTTCTTCGCAGGGGATGGATGTTGGCCCGCACCCGCATATT GGTCTGCAGACCTTTACCTGGATGATTGAAGGGGAAGTGCTACACCGTGACAGCCTGGGCAGTGAGCAGATTATACGGCC CGGGCAGGTCAATCTAATGACCGCAGGGCAGGGTATTACGCATACCGAGCAATCAACCGGAGAACAGCGGCGTTTGCATG CCGCGCAATTATGGATCGCCTTGCCGGCCGAACATGCCGATATGGCGCCGCGTTTTGATCATTATCCTGATTTGCCATGT TGGGTCAGTGATGGGGTCAAACAGACTTTGTTGGTGGGGGAGTTTGAACAATATCGCTCTCCGGTGTTTACTCTTTCACC ATTAATCGCCATTGATCTGGAATGGCAGGTCGACGGCTATTTGCAGTTGCCCCTGCGGGAAGATTTTGAAATAGGCTTTT TGCCCCTTATTGGTGCATTTGAGCTTAATGATGAAAATTTTTCACCCAATGAGTTTGCCTATTTAGGTAAGAATCTTAAC CGTATCGGGTTACATGCCAAGAAAGGAAGCCGGGGGTTATTAATCGGCGGAGTTCCATTAAGCGAAGAGATTCTCATTTG GTGGAATTTTGTTGGGCACAACAAGCAGGAGATTGCCCGTGCGCAGCATGACTGGGAGAAGGGGAATAGGCGTTTTCCCG ATGTTGTAGGCTATTCCGGCCCGCGCATGGCCGCGCCCCGCCTGCCCTGGAGCGATGTTTGA
Upstream 100 bases:
>100_bases TAGCGCCAGGGCCTCACAGGTTGCGTTCTGGATGCCGGCTCATGCTAAGCTGGCATCCGGCTACTCACTCACCTGTGTGA CGTTCTGGAGGCGTTTTATC
Downstream 100 bases:
>100_bases TATCATCAGGCTATAACGAACTAATGGTTTTATTCATTTCGCTCTATTAACGTTAAAATAATGTGATCGAAATTCCATGT TTGGGCGTAAATATAGTTTA
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA1205 [H]
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MSNSRPTHSSSSRDCPVVDGVRQIQRIAVRNAEVGGIGINRALPTRERRTVGAWCFLDHAGPSVFSGSSQGMDVGPHPHI GLQTFTWMIEGEVLHRDSLGSEQIIRPGQVNLMTAGQGITHTEQSTGEQRRLHAAQLWIALPAEHADMAPRFDHYPDLPC WVSDGVKQTLLVGEFEQYRSPVFTLSPLIAIDLEWQVDGYLQLPLREDFEIGFLPLIGAFELNDENFSPNEFAYLGKNLN RIGLHAKKGSRGLLIGGVPLSEEILIWWNFVGHNKQEIARAQHDWEKGNRRFPDVVGYSGPRMAAPRLPWSDV
Sequences:
>Translated_313_residues MSNSRPTHSSSSRDCPVVDGVRQIQRIAVRNAEVGGIGINRALPTRERRTVGAWCFLDHAGPSVFSGSSQGMDVGPHPHI GLQTFTWMIEGEVLHRDSLGSEQIIRPGQVNLMTAGQGITHTEQSTGEQRRLHAAQLWIALPAEHADMAPRFDHYPDLPC WVSDGVKQTLLVGEFEQYRSPVFTLSPLIAIDLEWQVDGYLQLPLREDFEIGFLPLIGAFELNDENFSPNEFAYLGKNLN RIGLHAKKGSRGLLIGGVPLSEEILIWWNFVGHNKQEIARAQHDWEKGNRRFPDVVGYSGPRMAAPRLPWSDV >Mature_312_residues SNSRPTHSSSSRDCPVVDGVRQIQRIAVRNAEVGGIGINRALPTRERRTVGAWCFLDHAGPSVFSGSSQGMDVGPHPHIG LQTFTWMIEGEVLHRDSLGSEQIIRPGQVNLMTAGQGITHTEQSTGEQRRLHAAQLWIALPAEHADMAPRFDHYPDLPCW VSDGVKQTLLVGEFEQYRSPVFTLSPLIAIDLEWQVDGYLQLPLREDFEIGFLPLIGAFELNDENFSPNEFAYLGKNLNR IGLHAKKGSRGLLIGGVPLSEEILIWWNFVGHNKQEIARAQHDWEKGNRRFPDVVGYSGPRMAAPRLPWSDV
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=225, Percent_Identity=26.6666666666667, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI4505823, Length=225, Percent_Identity=26.6666666666667, Blast_Score=80, Evalue=3e-15, Organism=Escherichia coli, GI1789847, Length=83, Percent_Identity=37.3493975903614, Blast_Score=68, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 34955; Mature: 34824
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSRPTHSSSSRDCPVVDGVRQIQRIAVRNAEVGGIGINRALPTRERRTVGAWCFLDHA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCEEEEEEEEECC GPSVFSGSSQGMDVGPHPHIGLQTFTWMIEGEVLHRDSLGSEQIIRPGQVNLMTAGQGIT CCCEECCCCCCCCCCCCCCCCCEEEEEEEECEEEECCCCCHHHCCCCCCEEEEECCCCCC HTEQSTGEQRRLHAAQLWIALPAEHADMAPRFDHYPDLPCWVSDGVKQTLLVGEFEQYRS CCCCCCCHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCHHHHCC PVFTLSPLIAIDLEWQVDGYLQLPLREDFEIGFLPLIGAFELNDENFSPNEFAYLGKNLN CEEEECCEEEEEEEEEECCEEECCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHCCCCC RIGLHAKKGSRGLLIGGVPLSEEILIWWNFVGHNKQEIARAQHDWEKGNRRFPDVVGYSG EEEEEECCCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHCCCC PRMAAPRLPWSDV CCCCCCCCCCCCC >Mature Secondary Structure SNSRPTHSSSSRDCPVVDGVRQIQRIAVRNAEVGGIGINRALPTRERRTVGAWCFLDHA CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCEEEEEEEEECC GPSVFSGSSQGMDVGPHPHIGLQTFTWMIEGEVLHRDSLGSEQIIRPGQVNLMTAGQGIT CCCEECCCCCCCCCCCCCCCCCEEEEEEEECEEEECCCCCHHHCCCCCCEEEEECCCCCC HTEQSTGEQRRLHAAQLWIALPAEHADMAPRFDHYPDLPCWVSDGVKQTLLVGEFEQYRS CCCCCCCHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCHHHHCC PVFTLSPLIAIDLEWQVDGYLQLPLREDFEIGFLPLIGAFELNDENFSPNEFAYLGKNLN CEEEECCEEEEEEEEEECCEEECCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHCCCCC RIGLHAKKGSRGLLIGGVPLSEEILIWWNFVGHNKQEIARAQHDWEKGNRRFPDVVGYSG EEEEEECCCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHCCCC PRMAAPRLPWSDV CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]