| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is yecJ [H]
Identifier: 157371071
GI number: 157371071
Start: 3109001
End: 3109240
Strand: Reverse
Name: yecJ [H]
Synonym: Spro_2831
Alternate gene names: 157371071
Gene position: 3109240-3109001 (Counterclockwise)
Preceding gene: 157371074
Following gene: 157371069
Centisome position: 57.06
GC content: 52.5
Gene sequence:
>240_bases ATGTCCGACATGCTGAACAACGATCAGGAATTGGCTTCCGACCTGGTAGCCTGCCAATTGGTGATCAAACAGATCCTGGA TGTTATCGATGTAATCGCACCCACCGAGGTGCGGGACAAGATGGCCAGCCAGTTGAAAAGCATCGATTTTACTACTCACC CAGCCGGTGCCGATCCCGTGACCCGGCGGGCGATTGAAAAAGCGATCGCGCTGATTGAAATGAAGTTTACCCGCAACTGA
Upstream 100 bases:
>100_bases GCAATAACGCTGAAAATTCAGCGGCAAACGGCCAGGGGGCAGCAAAGCGCCAGTCGGCATGCTATTGTGTGCGGCGTCTG AATCAAGAAGGAAAGGTATT
Downstream 100 bases:
>100_bases GGGGAAACCGCCGCTGAGCGACGGTTTGGGCGGTGGTGATTAATCCACCACCGTTTCGACTTTCTTGAACAGCGGACAGT CGGCAACGCCAATCAGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MSDMLNNDQELASDLVACQLVIKQILDVIDVIAPTEVRDKMASQLKSIDFTTHPAGADPVTRRAIEKAIALIEMKFTRN
Sequences:
>Translated_79_residues MSDMLNNDQELASDLVACQLVIKQILDVIDVIAPTEVRDKMASQLKSIDFTTHPAGADPVTRRAIEKAIALIEMKFTRN >Mature_78_residues SDMLNNDQELASDLVACQLVIKQILDVIDVIAPTEVRDKMASQLKSIDFTTHPAGADPVTRRAIEKAIALIEMKFTRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081998, Length=77, Percent_Identity=80.5194805194805, Blast_Score=127, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020262 - ProDom: PD060536 [H]
Pfam domain/function: PF10964 DUF2766 [H]
EC number: NA
Molecular weight: Translated: 8769; Mature: 8638
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDMLNNDQELASDLVACQLVIKQILDVIDVIAPTEVRDKMASQLKSIDFTTHPAGADPV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHH TRRAIEKAIALIEMKFTRN HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDMLNNDQELASDLVACQLVIKQILDVIDVIAPTEVRDKMASQLKSIDFTTHPAGADPV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHH TRRAIEKAIALIEMKFTRN HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]