BacMap

Definition	Serratia proteamaculans 568 chromosome, complete genome.
Accession	NC_009832
Length	5,448,853

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The map label for this gene is dbpA [H]

Identifier: 157371044

GI number: 157371044

Start: 3082008

End: 3083390

Strand: Reverse

Name: dbpA [H]

Synonym: Spro_2804

Alternate gene names: 157371044

Gene position: 3083390-3082008 (Counterclockwise)

Preceding gene: 157371046

Following gene: 157371043

Centisome position: 56.59

GC content: 59.15

Gene sequence:

>1383_bases
GTGAGCACAGTATCTTTTTCTTCCCTGCCGCTGCCAGCCGAACAGTTGGCCAACCTCAACGAACTGGGGTATGCCGAAAT
GACACCGGTGCAGGCCGCCGCACTGCCCGCCATCCTGAATGGGCAGGACGTACGTGCCAAAGCAAAAACCGGCAGCGGTA
AAACGGCGGCGTTCGGCATCGGTCTGCTGGACAAAATTAACGTAGCTCAGGTGGCCGCGCAGGCGCTGATCCTGTGCCCG
ACGCGTGAGCTGGCTGACCAGGTGAGCAAAGAATTGCGCCGTTTGGCGCGCTTCACCCAGAACATTAAAATTTTGACCCT
GTGCGGCGGCCAGCCGATGGGGCCGCAGCTTGACTCGCTGGTGCACGCGCCCCATATCGTGGTGGGGACGCCGGGGCGCA
TTCAGGAACACCTGCGCAAGAAAACGCTGGTACTGGATGAACTGAAAGTGCTGGTGCTGGACGAAGCTGACCGCATGTTG
GATATGGGTTTCGCCGATGACATCGATGACGTGATCAGTTACACGCCGCCGCAGCGCCAAACGCTGCTGTTCTCGGCAAC
CTATCCGAGCGGTATCGAACGCATCAGCGCCCGCGTGCAGCGCAGCCCGTTAAATGTGGAAGTGGACGACGGTGAAGAAC
AAACCACCATCGAACAACGCTTCTATGAAACCACCCGCGATCAGCGTCCGGCGGTGCTGGTGTCGGCAATCCGCCATTAC
CAACCTTCTTCCTGCGTGGTGTTCTGCAACACCAAGCGCGACTGTCAAAGCGTGTATGAAGCGCTGGAGTCTCGCGGCAT
CAACGTGCTGGCGCTGCATGGCGATCTGGAACAGCGCGATCGTGACCAGGTGCTGGTGCGTTTTGCCAACCGCAGTTGCC
GGGTGCTGGTGGCAACCGACGTTGCCGCACGCGGCCTGGATATCAAAGAGCTGGAGCTGGTAGTCAACTACGAGCTGGCA
TTTGATCCGGAAGTGCACGTACACCGCATTGGCCGTACCGGTCGTGCCGGTTTGAGCGGCAAGGCGATCAGCCTGTGTAC
ACCGCAGGAAATGACGCGTGCACATGCCATTGAAGACTATTTGCAAACCAAGGTTAAGTGGGCGCCGGTATCTGAGCTGA
GCGGGGCGGGGAATACCACGCTGGAAGCCGAAATGGTCACCCTGTGCATCGACGGTGGTCGCAAGGCCAAAATCCGTCCA
GGCGACATTCTCGGCGCATTGACCGGCGATGCCGGGCTGACGGCGGCGGAAGTGGGCAAGATCGACATGTTCCCGGTACA
TGCCTATGTGGCGATCCGCAAGGAAAGCGCCCGCAAGGCACTGCAACAGCTTCAGCAGGGCAAAATCAAGGGTAAGAACT
GCAAGGTGCGGTTGTTGAAATAA

Upstream 100 bases:

>100_bases
CGTGAAATCCGTAATCCACCCTATCTCTGTTATCATCTGCGGCTGATTCGGTGCTGCCCTGAGCGCGCCGCCATTCCATT
TGCCATAAAGAGTTATCGCC

Downstream 100 bases:

>100_bases
GTCGCGTCAGGGGTGCGCTTGCATCCCTGCGTAAAATCACCTTATACTGTATAAAAATACAGTATTCTAACCTTTGAGGA
ATGCACACATGGCCGTTGAA

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MSTVSFSSLPLPAEQLANLNELGYAEMTPVQAAALPAILNGQDVRAKAKTGSGKTAAFGIGLLDKINVAQVAAQALILCP
TRELADQVSKELRRLARFTQNIKILTLCGGQPMGPQLDSLVHAPHIVVGTPGRIQEHLRKKTLVLDELKVLVLDEADRML
DMGFADDIDDVISYTPPQRQTLLFSATYPSGIERISARVQRSPLNVEVDDGEEQTTIEQRFYETTRDQRPAVLVSAIRHY
QPSSCVVFCNTKRDCQSVYEALESRGINVLALHGDLEQRDRDQVLVRFANRSCRVLVATDVAARGLDIKELELVVNYELA
FDPEVHVHRIGRTGRAGLSGKAISLCTPQEMTRAHAIEDYLQTKVKWAPVSELSGAGNTTLEAEMVTLCIDGGRKAKIRP
GDILGALTGDAGLTAAEVGKIDMFPVHAYVAIRKESARKALQQLQQGKIKGKNCKVRLLK

Sequences:

>Translated_460_residues
MSTVSFSSLPLPAEQLANLNELGYAEMTPVQAAALPAILNGQDVRAKAKTGSGKTAAFGIGLLDKINVAQVAAQALILCP
TRELADQVSKELRRLARFTQNIKILTLCGGQPMGPQLDSLVHAPHIVVGTPGRIQEHLRKKTLVLDELKVLVLDEADRML
DMGFADDIDDVISYTPPQRQTLLFSATYPSGIERISARVQRSPLNVEVDDGEEQTTIEQRFYETTRDQRPAVLVSAIRHY
QPSSCVVFCNTKRDCQSVYEALESRGINVLALHGDLEQRDRDQVLVRFANRSCRVLVATDVAARGLDIKELELVVNYELA
FDPEVHVHRIGRTGRAGLSGKAISLCTPQEMTRAHAIEDYLQTKVKWAPVSELSGAGNTTLEAEMVTLCIDGGRKAKIRP
GDILGALTGDAGLTAAEVGKIDMFPVHAYVAIRKESARKALQQLQQGKIKGKNCKVRLLK
>Mature_459_residues
STVSFSSLPLPAEQLANLNELGYAEMTPVQAAALPAILNGQDVRAKAKTGSGKTAAFGIGLLDKINVAQVAAQALILCPT
RELADQVSKELRRLARFTQNIKILTLCGGQPMGPQLDSLVHAPHIVVGTPGRIQEHLRKKTLVLDELKVLVLDEADRMLD
MGFADDIDDVISYTPPQRQTLLFSATYPSGIERISARVQRSPLNVEVDDGEEQTTIEQRFYETTRDQRPAVLVSAIRHYQ
PSSCVVFCNTKRDCQSVYEALESRGINVLALHGDLEQRDRDQVLVRFANRSCRVLVATDVAARGLDIKELELVVNYELAF
DPEVHVHRIGRTGRAGLSGKAISLCTPQEMTRAHAIEDYLQTKVKWAPVSELSGAGNTTLEAEMVTLCIDGGRKAKIRPG
DILGALTGDAGLTAAEVGKIDMFPVHAYVAIRKESARKALQQLQQGKIKGKNCKVRLLK

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=371, Percent_Identity=34.7708894878706, Blast_Score=238, Evalue=9e-63,
Organism=Homo sapiens, GI31542656, Length=378, Percent_Identity=36.2433862433862, Blast_Score=234, Evalue=2e-61,
Organism=Homo sapiens, GI45446747, Length=423, Percent_Identity=34.51536643026, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI45446743, Length=423, Percent_Identity=34.51536643026, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI262118318, Length=343, Percent_Identity=38.7755102040816, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI50659095, Length=380, Percent_Identity=36.5789473684211, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI216548263, Length=343, Percent_Identity=38.7755102040816, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI262231852, Length=343, Percent_Identity=38.7755102040816, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI13518015, Length=343, Percent_Identity=38.7755102040816, Blast_Score=219, Evalue=3e-57,
Organism=Homo sapiens, GI164664518, Length=364, Percent_Identity=31.043956043956, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI13129006, Length=374, Percent_Identity=36.096256684492, Blast_Score=215, Evalue=7e-56,
Organism=Homo sapiens, GI41327773, Length=344, Percent_Identity=36.9186046511628, Blast_Score=212, Evalue=7e-55,
Organism=Homo sapiens, GI21071032, Length=394, Percent_Identity=32.994923857868, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI41327771, Length=382, Percent_Identity=34.5549738219895, Blast_Score=210, Evalue=3e-54,
Organism=Homo sapiens, GI20149629, Length=355, Percent_Identity=33.5211267605634, Blast_Score=208, Evalue=8e-54,
Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=34.4086021505376, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI164419743, Length=376, Percent_Identity=34.8404255319149, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI51094101, Length=376, Percent_Identity=34.8404255319149, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI41327779, Length=401, Percent_Identity=33.9152119700748, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI83700235, Length=372, Percent_Identity=33.8709677419355, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI224593278, Length=356, Percent_Identity=34.8314606741573, Blast_Score=199, Evalue=3e-51,
Organism=Homo sapiens, GI148613856, Length=364, Percent_Identity=32.967032967033, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI38201710, Length=364, Percent_Identity=32.967032967033, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI4758138, Length=358, Percent_Identity=32.4022346368715, Blast_Score=198, Evalue=7e-51,
Organism=Homo sapiens, GI13514831, Length=378, Percent_Identity=34.1269841269841, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI38327634, Length=393, Percent_Identity=34.0966921119593, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI87196351, Length=372, Percent_Identity=34.9462365591398, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=35.4838709677419, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=35.4838709677419, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI301171475, Length=372, Percent_Identity=34.4086021505376, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI301171467, Length=372, Percent_Identity=34.4086021505376, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI21040371, Length=370, Percent_Identity=29.7297297297297, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI4758112, Length=370, Percent_Identity=29.7297297297297, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI18375623, Length=370, Percent_Identity=29.7297297297297, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI222352149, Length=358, Percent_Identity=32.4022346368715, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI188035877, Length=358, Percent_Identity=31.8435754189944, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI256223453, Length=351, Percent_Identity=30.4843304843305, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI55749865, Length=348, Percent_Identity=29.5977011494253, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI41327776, Length=354, Percent_Identity=30.5084745762712, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI164419732, Length=360, Percent_Identity=30, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI6005743, Length=380, Percent_Identity=29.4736842105263, Blast_Score=162, Evalue=5e-40,
Organism=Homo sapiens, GI8922886, Length=380, Percent_Identity=29.2105263157895, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI9506931, Length=398, Percent_Identity=27.6381909547739, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI62241022, Length=360, Percent_Identity=29.4444444444444, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI62241024, Length=338, Percent_Identity=29.585798816568, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI38569503, Length=366, Percent_Identity=30.0546448087432, Blast_Score=145, Evalue=8e-35,
Organism=Homo sapiens, GI38569505, Length=366, Percent_Identity=30.0546448087432, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI256773275, Length=394, Percent_Identity=30.4568527918782, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI9966805, Length=320, Percent_Identity=32.8125, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI4826686, Length=345, Percent_Identity=30.1449275362319, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI154759257, Length=399, Percent_Identity=26.8170426065163, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI17505907, Length=221, Percent_Identity=31.6742081447964, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI20336298, Length=221, Percent_Identity=31.6742081447964, Blast_Score=105, Evalue=1e-22,
Organism=Escherichia coli, GI1787605, Length=458, Percent_Identity=66.8122270742358, Blast_Score=613, Evalue=1e-177,
Organism=Escherichia coli, GI87082221, Length=375, Percent_Identity=41.0666666666667, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI1787016, Length=371, Percent_Identity=41.2398921832884, Blast_Score=255, Evalue=4e-69,
Organism=Escherichia coli, GI1790214, Length=386, Percent_Identity=36.2694300518135, Blast_Score=208, Evalue=6e-55,
Organism=Escherichia coli, GI1788930, Length=380, Percent_Identity=35.5263157894737, Blast_Score=191, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI71995724, Length=369, Percent_Identity=35.5013550135501, Blast_Score=244, Evalue=6e-65,
Organism=Caenorhabditis elegans, GI17507121, Length=369, Percent_Identity=35.5013550135501, Blast_Score=244, Evalue=8e-65,
Organism=Caenorhabditis elegans, GI71987143, Length=369, Percent_Identity=34.9593495934959, Blast_Score=235, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI115532546, Length=376, Percent_Identity=34.3085106382979, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI115532548, Length=382, Percent_Identity=34.2931937172775, Blast_Score=216, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17552114, Length=366, Percent_Identity=31.4207650273224, Blast_Score=214, Evalue=8e-56,
Organism=Caenorhabditis elegans, GI32565321, Length=376, Percent_Identity=35.1063829787234, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI17555296, Length=363, Percent_Identity=35.2617079889807, Blast_Score=211, Evalue=7e-55,
Organism=Caenorhabditis elegans, GI17552642, Length=356, Percent_Identity=36.2359550561798, Blast_Score=207, Evalue=6e-54,
Organism=Caenorhabditis elegans, GI115533224, Length=364, Percent_Identity=35.7142857142857, Blast_Score=204, Evalue=6e-53,
Organism=Caenorhabditis elegans, GI17510559, Length=383, Percent_Identity=34.4647519582245, Blast_Score=201, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI71982858, Length=374, Percent_Identity=29.6791443850267, Blast_Score=201, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=34.6883468834688, Blast_Score=197, Evalue=9e-51,
Organism=Caenorhabditis elegans, GI86570094, Length=348, Percent_Identity=37.9310344827586, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17507879, Length=369, Percent_Identity=34.6883468834688, Blast_Score=194, Evalue=9e-50,
Organism=Caenorhabditis elegans, GI71999646, Length=333, Percent_Identity=35.4354354354354, Blast_Score=192, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17505370, Length=363, Percent_Identity=33.8842975206612, Blast_Score=192, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI71999644, Length=333, Percent_Identity=35.4354354354354, Blast_Score=191, Evalue=8e-49,
Organism=Caenorhabditis elegans, GI17510307, Length=352, Percent_Identity=36.0795454545455, Blast_Score=191, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17510309, Length=352, Percent_Identity=36.0795454545455, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17507945, Length=364, Percent_Identity=35.4395604395604, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI71995514, Length=354, Percent_Identity=35.8757062146893, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=32.520325203252, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17536099, Length=392, Percent_Identity=31.8877551020408, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI17536101, Length=392, Percent_Identity=31.8877551020408, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI71995718, Length=379, Percent_Identity=34.0369393139842, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17536103, Length=392, Percent_Identity=31.8877551020408, Blast_Score=181, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI17553716, Length=367, Percent_Identity=29.9727520435967, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17537549, Length=353, Percent_Identity=32.2946175637394, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17509811, Length=355, Percent_Identity=30.9859154929577, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI193206561, Length=348, Percent_Identity=30.7471264367816, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17556951, Length=389, Percent_Identity=28.2776349614396, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17507641, Length=387, Percent_Identity=31.0077519379845, Blast_Score=148, Evalue=7e-36,
Organism=Caenorhabditis elegans, GI193208216, Length=391, Percent_Identity=29.156010230179, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71990816, Length=371, Percent_Identity=30.7277628032345, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=30.7486631016043, Blast_Score=139, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI25148203, Length=404, Percent_Identity=25.7425742574257, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI71982862, Length=200, Percent_Identity=34.5, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17508543, Length=374, Percent_Identity=28.6096256684492, Blast_Score=125, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI25148291, Length=329, Percent_Identity=28.5714285714286, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71997889, Length=372, Percent_Identity=27.9569892473118, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI25148205, Length=338, Percent_Identity=24.8520710059172, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI71987152, Length=103, Percent_Identity=41.747572815534, Blast_Score=93, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=36.6666666666667, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6321856, Length=364, Percent_Identity=37.0879120879121, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6320224, Length=377, Percent_Identity=33.42175066313, Blast_Score=221, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6324217, Length=358, Percent_Identity=36.3128491620112, Blast_Score=214, Evalue=3e-56,
Organism=Saccharomyces cerevisiae, GI6321963, Length=375, Percent_Identity=36.2666666666667, Blast_Score=208, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6322912, Length=368, Percent_Identity=33.695652173913, Blast_Score=207, Evalue=3e-54,
Organism=Saccharomyces cerevisiae, GI6322323, Length=368, Percent_Identity=33.695652173913, Blast_Score=207, Evalue=3e-54,
Organism=Saccharomyces cerevisiae, GI6320041, Length=367, Percent_Identity=31.3351498637602, Blast_Score=207, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6321360, Length=361, Percent_Identity=36.5650969529086, Blast_Score=206, Evalue=5e-54,
Organism=Saccharomyces cerevisiae, GI6322427, Length=362, Percent_Identity=37.0165745856354, Blast_Score=198, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6324778, Length=376, Percent_Identity=33.5106382978723, Blast_Score=196, Evalue=5e-51,
Organism=Saccharomyces cerevisiae, GI6323947, Length=360, Percent_Identity=34.1666666666667, Blast_Score=192, Evalue=7e-50,
Organism=Saccharomyces cerevisiae, GI6325138, Length=393, Percent_Identity=33.0788804071247, Blast_Score=192, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6324620, Length=356, Percent_Identity=32.0224719101124, Blast_Score=188, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6320449, Length=358, Percent_Identity=32.4022346368715, Blast_Score=184, Evalue=4e-47,
Organism=Saccharomyces cerevisiae, GI6320119, Length=380, Percent_Identity=29.2105263157895, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6321111, Length=368, Percent_Identity=32.3369565217391, Blast_Score=176, Evalue=6e-45,
Organism=Saccharomyces cerevisiae, GI6319714, Length=384, Percent_Identity=29.6875, Blast_Score=173, Evalue=5e-44,
Organism=Saccharomyces cerevisiae, GI6319618, Length=411, Percent_Identity=30.1703163017032, Blast_Score=169, Evalue=6e-43,
Organism=Saccharomyces cerevisiae, GI6321267, Length=348, Percent_Identity=33.9080459770115, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6323306, Length=414, Percent_Identity=26.8115942028986, Blast_Score=139, Evalue=7e-34,
Organism=Saccharomyces cerevisiae, GI6320400, Length=393, Percent_Identity=26.7175572519084, Blast_Score=134, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6320173, Length=191, Percent_Identity=37.17277486911, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6324366, Length=347, Percent_Identity=25.3602305475504, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6322876, Length=226, Percent_Identity=26.5486725663717, Blast_Score=78, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24645031, Length=369, Percent_Identity=34.4173441734417, Blast_Score=234, Evalue=8e-62,
Organism=Drosophila melanogaster, GI17136814, Length=375, Percent_Identity=37.6, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24584399, Length=353, Percent_Identity=36.2606232294618, Blast_Score=225, Evalue=6e-59,
Organism=Drosophila melanogaster, GI24662330, Length=352, Percent_Identity=37.7840909090909, Blast_Score=222, Evalue=4e-58,
Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=34.7708894878706, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=34.7708894878706, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=34.7708894878706, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=34.7708894878706, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI28575014, Length=389, Percent_Identity=33.9331619537275, Blast_Score=207, Evalue=9e-54,
Organism=Drosophila melanogaster, GI24642151, Length=358, Percent_Identity=36.3128491620112, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=31.8681318681319, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=31.8681318681319, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24585582, Length=344, Percent_Identity=34.3023255813954, Blast_Score=204, Evalue=9e-53,
Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=34.9162011173184, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI21356161, Length=356, Percent_Identity=35.6741573033708, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI17985987, Length=349, Percent_Identity=37.5358166189112, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24584994, Length=380, Percent_Identity=34.2105263157895, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24644487, Length=369, Percent_Identity=33.3333333333333, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI45551833, Length=369, Percent_Identity=33.3333333333333, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24644485, Length=369, Percent_Identity=33.3333333333333, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24644483, Length=369, Percent_Identity=33.3333333333333, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI281361218, Length=369, Percent_Identity=33.3333333333333, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24644481, Length=369, Percent_Identity=33.3333333333333, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24644479, Length=369, Percent_Identity=33.3333333333333, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI21355075, Length=374, Percent_Identity=31.8181818181818, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI18857967, Length=367, Percent_Identity=32.6975476839237, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI28574962, Length=407, Percent_Identity=31.4496314496315, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI28571808, Length=359, Percent_Identity=33.1476323119777, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI28571809, Length=359, Percent_Identity=33.1476323119777, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24581954, Length=370, Percent_Identity=29.1891891891892, Blast_Score=178, Evalue=7e-45,
Organism=Drosophila melanogaster, GI24581952, Length=370, Percent_Identity=29.1891891891892, Blast_Score=178, Evalue=7e-45,
Organism=Drosophila melanogaster, GI24581956, Length=370, Percent_Identity=29.1891891891892, Blast_Score=178, Evalue=7e-45,
Organism=Drosophila melanogaster, GI21355559, Length=391, Percent_Identity=32.4808184143223, Blast_Score=172, Evalue=4e-43,
Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=32.2784810126582, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI24666101, Length=371, Percent_Identity=29.3800539083558, Blast_Score=152, Evalue=5e-37,
Organism=Drosophila melanogaster, GI24642822, Length=387, Percent_Identity=29.1989664082687, Blast_Score=152, Evalue=5e-37,
Organism=Drosophila melanogaster, GI17647335, Length=353, Percent_Identity=28.6118980169972, Blast_Score=143, Evalue=2e-34,
Organism=Drosophila melanogaster, GI19920478, Length=359, Percent_Identity=30.08356545961, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24643725, Length=396, Percent_Identity=26.2626262626263, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI20130173, Length=448, Percent_Identity=28.5714285714286, Blast_Score=138, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=29.7546012269939, Blast_Score=135, Evalue=9e-32,
Organism=Drosophila melanogaster, GI17136666, Length=408, Percent_Identity=25.9803921568627, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI28571338, Length=224, Percent_Identity=31.25, Blast_Score=105, Evalue=8e-23,
Organism=Drosophila melanogaster, GI18859659, Length=224, Percent_Identity=31.25, Blast_Score=105, Evalue=8e-23,
Organism=Drosophila melanogaster, GI24640164, Length=352, Percent_Identity=23.0113636363636, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 50333; Mature: 50201

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVSFSSLPLPAEQLANLNELGYAEMTPVQAAALPAILNGQDVRAKAKTGSGKTAAFGI
CCCCCCCCCCCCHHHHCCCHHCCCCCCCCHHHHHCCHHCCCCCCEEEECCCCCCEEEEEC
GLLDKINVAQVAAQALILCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGPQLDSL
CCCCCCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHH
VHAPHIVVGTPGRIQEHLRKKTLVLDELKVLVLDEADRMLDMGFADDIDDVISYTPPQRQ
HCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHCCCCCCHHHHHCCCCCCCC
TLLFSATYPSGIERISARVQRSPLNVEVDDGEEQTTIEQRFYETTRDQRPAVLVSAIRHY
EEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHC
QPSSCVVFCNTKRDCQSVYEALESRGINVLALHGDLEQRDRDQVLVRFANRSCRVLVATD
CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEC
VAARGLDIKELELVVNYELAFDPEVHVHRIGRTGRAGLSGKAISLCTPQEMTRAHAIEDY
HHHCCCCCEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHH
LQTKVKWAPVSELSGAGNTTLEAEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAAEVGK
HHHCEEECCHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHCCC
IDMFPVHAYVAIRKESARKALQQLQQGKIKGKNCKVRLLK
EEEEEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEC
>Mature Secondary Structure 
STVSFSSLPLPAEQLANLNELGYAEMTPVQAAALPAILNGQDVRAKAKTGSGKTAAFGI
CCCCCCCCCCCHHHHCCCHHCCCCCCCCHHHHHCCHHCCCCCCEEEECCCCCCEEEEEC
GLLDKINVAQVAAQALILCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGPQLDSL
CCCCCCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHH
VHAPHIVVGTPGRIQEHLRKKTLVLDELKVLVLDEADRMLDMGFADDIDDVISYTPPQRQ
HCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHCCCCCCHHHHHCCCCCCCC
TLLFSATYPSGIERISARVQRSPLNVEVDDGEEQTTIEQRFYETTRDQRPAVLVSAIRHY
EEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHC
QPSSCVVFCNTKRDCQSVYEALESRGINVLALHGDLEQRDRDQVLVRFANRSCRVLVATD
CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEC
VAARGLDIKELELVVNYELAFDPEVHVHRIGRTGRAGLSGKAISLCTPQEMTRAHAIEDY
HHHCCCCCEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHH
LQTKVKWAPVSELSGAGNTTLEAEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAAEVGK
HHHCEEECCHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHCCC
IDMFPVHAYVAIRKESARKALQQLQQGKIKGKNCKVRLLK
EEEEEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]