| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370926
Identifier: 157370926
GI number: 157370926
Start: 2956795
End: 2957340
Strand: Reverse
Name: 157370926
Synonym: Spro_2686
Alternate gene names: NA
Gene position: 2957340-2956795 (Counterclockwise)
Preceding gene: 157370931
Following gene: 157370923
Centisome position: 54.27
GC content: 56.41
Gene sequence:
>546_bases ATGGGACGTCAACGGAGCATCGATCGCGACAAGGTTCTGGATATGGCGGAGGAGATTGTCGCCAGGCAGGGTGCCGCCGG TTTGACCATTGATTCTGTTGCCAAGGCGATGGGAATTTCCAAGGGCGGGGTGCAGTACTGCTTTGGTACTAAAGACGCGT TAATTGATGCGATGTTCGAACGTTGGGGTAAAGCCTATGACCAGGTTTTCGATGCCATTGCCGGGGAAAGTCCCTCGGCC ACAACGACAGTGCGGGCGCATATGCAGGCCACCCAAAGTTCCGATCAGGCATCCAGCGCCAAGGCCGCAGGGCTGATGGC GACCCTGATCCAAACGCCAGAGCACTTGGAAAGCACGCGCGAGTGGTACCGCAGCCGGATCGACGGTCTGGATTTAACCA CCGAGGAAGGCAAGAGGGCGCGGTTGGCCTTTCTGGCTACCGAAGGGGCATTTATGTTGCGTTTCTTTGGCCTGATGGAG ATTAACCAGCCGGAATGGGATGCCATGTTCGCGGATATGCAGACGCTGATTCTGGCGAAAAAATAG
Upstream 100 bases:
>100_bases CGACGCGGATGCGTTGCCATAAGGTCACCACCCGAACGCGCCGGGTGGTATACTGGCGTAATATATATCCATACGTATGT ATTGAAAAGAGGGTTTCTCA
Downstream 100 bases:
>100_bases TTCACCTATCACAGCGATAGCTGGCGGACCAGCAGGTGAAAAGAGTAGTTTTATCGAACAAGATATTCCCTCGAAGAACC CTTTAGCCAGCCACTCCGTG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Regulatory Protein; Transcriptional Regulator TetR
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MGRQRSIDRDKVLDMAEEIVARQGAAGLTIDSVAKAMGISKGGVQYCFGTKDALIDAMFERWGKAYDQVFDAIAGESPSA TTTVRAHMQATQSSDQASSAKAAGLMATLIQTPEHLESTREWYRSRIDGLDLTTEEGKRARLAFLATEGAFMLRFFGLME INQPEWDAMFADMQTLILAKK
Sequences:
>Translated_181_residues MGRQRSIDRDKVLDMAEEIVARQGAAGLTIDSVAKAMGISKGGVQYCFGTKDALIDAMFERWGKAYDQVFDAIAGESPSA TTTVRAHMQATQSSDQASSAKAAGLMATLIQTPEHLESTREWYRSRIDGLDLTTEEGKRARLAFLATEGAFMLRFFGLME INQPEWDAMFADMQTLILAKK >Mature_180_residues GRQRSIDRDKVLDMAEEIVARQGAAGLTIDSVAKAMGISKGGVQYCFGTKDALIDAMFERWGKAYDQVFDAIAGESPSAT TTVRAHMQATQSSDQASSAKAAGLMATLIQTPEHLESTREWYRSRIDGLDLTTEEGKRARLAFLATEGAFMLRFFGLMEI NQPEWDAMFADMQTLILAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19923; Mature: 19792
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRQRSIDRDKVLDMAEEIVARQGAAGLTIDSVAKAMGISKGGVQYCFGTKDALIDAMFE CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHH RWGKAYDQVFDAIAGESPSATTTVRAHMQATQSSDQASSAKAAGLMATLIQTPEHLESTR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHH EWYRSRIDGLDLTTEEGKRARLAFLATEGAFMLRFFGLMEINQPEWDAMFADMQTLILAK HHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC K C >Mature Secondary Structure GRQRSIDRDKVLDMAEEIVARQGAAGLTIDSVAKAMGISKGGVQYCFGTKDALIDAMFE CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHH RWGKAYDQVFDAIAGESPSATTTVRAHMQATQSSDQASSAKAAGLMATLIQTPEHLESTR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHH EWYRSRIDGLDLTTEEGKRARLAFLATEGAFMLRFFGLMEINQPEWDAMFADMQTLILAK HHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA