Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is 157370784

Identifier: 157370784

GI number: 157370784

Start: 2799847

End: 2800902

Strand: Reverse

Name: 157370784

Synonym: Spro_2544

Alternate gene names: NA

Gene position: 2800902-2799847 (Counterclockwise)

Preceding gene: 157370786

Following gene: 157370783

Centisome position: 51.4

GC content: 57.77

Gene sequence:

>1056_bases
ATGAAAACCTTGAAAGGTCCAAGCCTGCATCTGGCACAGTTCAGTGACGATGCCGCCCCCTTTAACAGCCTGCCGGCTAT
CGCCCAGTGGGCGGCGCAAACCGGCTTTAAAGCTTTGCAAATTCCGGCATGGGATAGTCGCCTGTTTGATTTGGCCACCG
CCGCAGAAAGCCAAACCTATTGTGATGAGCTGGTCGGCATGTTGGCAGACCATGGCCTGGTGGTCAGTGAACTCACTACC
CATATTTTTGGCCAGTTGATGGCAGTGCATCCGGCCTATGACGCATTGTGCGACAGTTTTGCGCCAGCGGAACTGCATGG
CAACCCGCAGGCGCGCGGTGAATGGGCGCACCGGCAGTTGCTGTTGGCGGCCAAAGCCTCTGCGCGGTTGGGACTCAGTG
AGATGGGCACCTTCTCCGGTTCCCTGGCCTGGCCGTATTTGTTCCCGTTCCCGCAGCGTCCGGCGGGGCTGATCGAAACG
GCGTTCGATGAACTGGCCAAACGCTGGTTGCCGGTGCTCAACGCCTGCGACGAGCAGGGAGTGAACCTGTGTTATGAAAT
TCACCCGAGCGAAGATCTGCACGACGGCGTGACCTTTGAAATGTTTCATCAGCGCGTTGGGGCACATCCGCGTTGCCAGA
TCCTGTTCGACCCGAGTCACTTCGTGCTGCAACAGTTGAACTATCTGGATTACATCGATATTTACAAGGACTTTATCCGC
ATGTTCCACGTCAAGGACGCCGAGTTCAACCCGACCGGACGGCAGGGCATTTACGGCGGCTATCAGTCATGGACCGACCG
TGCCGGACGTTTCCGCTCATTGGGTGACGGCCAGGTGGATTTCAAAGGCATTTTCTCGCGGCTGACCCAGCATGGCTACG
CCGGTTGGGCGACGCTGGAGTGGGAATGCTGCCTGAAACACCCGCAGGATGGCGCACGCGAAGGCGCGGCCTTTATTCGT
GACCACATCATCAACGTCACCGACAAGGTGTTTGATGACTTTGCCGGCGCGCCGGTTGACCAACAGCAAATCAATACCTT
GCTTGGCCTGCGCTGA

Upstream 100 bases:

>100_bases
GCTTAAATCCACTGTAATACCAACGATTTTTTAAAATTCGCTTGCTGAAGGATTCATTTAAGCCTATTGTTTGTCAATCG
ACAACCAATTGGAGTTTAGA

Downstream 100 bases:

>100_bases
GCCACACAATTCCACCACGGAGAACACCGATGACACTGCAAAATAACGGGTCCATGTTGAATGGACCTGAACCAGAACAC
GTCTATACGCGGGTAAACGG

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase-Like TIM Barrel; Xylose Isomerase-Like Protein; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase Domain Protein Tim Barrel; Iole Protein; AP Endonuclease; Endonuclease IV; Apurinic/Apyrimidinic Endonuclease; Endonuclease; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; Inosose Dehydratase; IolE-Like Protein; IolE Protein; Xylose Isomerase-Like; Xylose Isomerase-Like TIM Barrel Family Protein; AP Endonuclease Family 2 C Terminus Family; Xylose Isomerase/Endonuclease Family Protein; Sugar Phosphate Isomerase/Epimerase IolE; Xlose Isomerase Domain-Containing Protein

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MKTLKGPSLHLAQFSDDAAPFNSLPAIAQWAAQTGFKALQIPAWDSRLFDLATAAESQTYCDELVGMLADHGLVVSELTT
HIFGQLMAVHPAYDALCDSFAPAELHGNPQARGEWAHRQLLLAAKASARLGLSEMGTFSGSLAWPYLFPFPQRPAGLIET
AFDELAKRWLPVLNACDEQGVNLCYEIHPSEDLHDGVTFEMFHQRVGAHPRCQILFDPSHFVLQQLNYLDYIDIYKDFIR
MFHVKDAEFNPTGRQGIYGGYQSWTDRAGRFRSLGDGQVDFKGIFSRLTQHGYAGWATLEWECCLKHPQDGAREGAAFIR
DHIINVTDKVFDDFAGAPVDQQQINTLLGLR

Sequences:

>Translated_351_residues
MKTLKGPSLHLAQFSDDAAPFNSLPAIAQWAAQTGFKALQIPAWDSRLFDLATAAESQTYCDELVGMLADHGLVVSELTT
HIFGQLMAVHPAYDALCDSFAPAELHGNPQARGEWAHRQLLLAAKASARLGLSEMGTFSGSLAWPYLFPFPQRPAGLIET
AFDELAKRWLPVLNACDEQGVNLCYEIHPSEDLHDGVTFEMFHQRVGAHPRCQILFDPSHFVLQQLNYLDYIDIYKDFIR
MFHVKDAEFNPTGRQGIYGGYQSWTDRAGRFRSLGDGQVDFKGIFSRLTQHGYAGWATLEWECCLKHPQDGAREGAAFIR
DHIINVTDKVFDDFAGAPVDQQQINTLLGLR
>Mature_351_residues
MKTLKGPSLHLAQFSDDAAPFNSLPAIAQWAAQTGFKALQIPAWDSRLFDLATAAESQTYCDELVGMLADHGLVVSELTT
HIFGQLMAVHPAYDALCDSFAPAELHGNPQARGEWAHRQLLLAAKASARLGLSEMGTFSGSLAWPYLFPFPQRPAGLIET
AFDELAKRWLPVLNACDEQGVNLCYEIHPSEDLHDGVTFEMFHQRVGAHPRCQILFDPSHFVLQQLNYLDYIDIYKDFIR
MFHVKDAEFNPTGRQGIYGGYQSWTDRAGRFRSLGDGQVDFKGIFSRLTQHGYAGWATLEWECCLKHPQDGAREGAAFIR
DHIINVTDKVFDDFAGAPVDQQQINTLLGLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39231; Mature: 39231

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLKGPSLHLAQFSDDAAPFNSLPAIAQWAAQTGFKALQIPAWDSRLFDLATAAESQTY
CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHH
CDELVGMLADHGLVVSELTTHIFGQLMAVHPAYDALCDSFAPAELHGNPQARGEWAHRQL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHCCCCCCCCCHHHHHHH
LLAAKASARLGLSEMGTFSGSLAWPYLFPFPQRPAGLIETAFDELAKRWLPVLNACDEQG
HHHHHHHHHCCHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
VNLCYEIHPSEDLHDGVTFEMFHQRVGAHPRCQILFDPSHFVLQQLNYLDYIDIYKDFIR
CCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
MFHVKDAEFNPTGRQGIYGGYQSWTDRAGRFRSLGDGQVDFKGIFSRLTQHGYAGWATLE
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEE
WECCLKHPQDGAREGAAFIRDHIINVTDKVFDDFAGAPVDQQQINTLLGLR
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKTLKGPSLHLAQFSDDAAPFNSLPAIAQWAAQTGFKALQIPAWDSRLFDLATAAESQTY
CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHH
CDELVGMLADHGLVVSELTTHIFGQLMAVHPAYDALCDSFAPAELHGNPQARGEWAHRQL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHCCCCCCCCCHHHHHHH
LLAAKASARLGLSEMGTFSGSLAWPYLFPFPQRPAGLIETAFDELAKRWLPVLNACDEQG
HHHHHHHHHCCHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
VNLCYEIHPSEDLHDGVTFEMFHQRVGAHPRCQILFDPSHFVLQQLNYLDYIDIYKDFIR
CCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
MFHVKDAEFNPTGRQGIYGGYQSWTDRAGRFRSLGDGQVDFKGIFSRLTQHGYAGWATLE
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEE
WECCLKHPQDGAREGAAFIRDHIINVTDKVFDDFAGAPVDQQQINTLLGLR
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA