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The map label for this gene is yugT [H]

Identifier: 157370761

GI number: 157370761

Start: 2768743

End: 2770413

Strand: Reverse

Name: yugT [H]

Synonym: Spro_2521

Alternate gene names: 157370761

Gene position: 2770413-2768743 (Counterclockwise)

Preceding gene: 157370762

Following gene: 157370760

Centisome position: 50.84

GC content: 53.2

Gene sequence:

>1671_bases
ATGAGCAGTGGGCAAACCGTGCGTTGGTGGAAACAGGCGGTGGTTTATCAGATCTATCCGCGCAGCTTTATGGATTCTAA
CGGCGATGGCATTGGCGATCTGAATGGCATCACCGACAAGCTGGACTATTTGCAGTGGCTGGGCATTGACGTGATTTGGA
TCTGCCCGATGTACCGTTCGCCGAACGACGACAATGGTTACGATATCAGTGATTATCAGGCCATTATGACGGAGTTCGGC
ACCATGGCGGACTTTGACCGTTTGTTGGCCGAAGTGCATGCCCGCGGCATGCGTTTGATACTGGATTTGGTGGTCAACCA
CACTTCGGATGAGCATCCGTGGTTTATTGAATCCCGGTCATCTCAATCGAGTGCCAAACGCGACTGGTATATCTGGCGAG
ACGGCAAAAACGGCGCGGAACCCAACAACTGGGAAAGCATCTTCAACGGTTCCGCCTGGAAATATGACCCCGGCAGCGAA
CAATACTTTCTGCACCTGTTCTCTGAACGTCAACCGGATCTGAACTGGGAGAATCCGCAGGTGCGTACGGCGCTGTATGA
CATGATGCGCTGGTGGCTGGACAAGGGCATTGACGGCTTCCGCATCGACGCTATCTGCCATATGAAAAAACAGCCGGGGC
TGACCGATATGCCCAACCCGCAGGGACTGCGTTATGTGCCGTCGTTCGAACGGCATCTTAACTACGACGGCCTGCTGGAC
TATGTCGATGACCTGTGCGAGCAGGTATTTAACCGCTACGACATCATGACGGTGGGCGAAATGAACGGGGCCTCGGCACA
GCAGGGCGAGGACTGGGTGGGGGAACAGCACGGCCGCCTGAATATGATCTTCCAGTTTGAACACGTCAAACTGTGGGAAA
CCAGCCATCAGCAGTCACCGGACGCTGGGCTCGATGTGATGGGTCTGAAAGAGATCTTTACCCGCTGGCAGACATTGCTG
GAAGGGAAAGGCTGGAACGCGTTGTACGTCGAAAATCATGATATTCCGCGCGTGGTCTCTAAATGGGGTGACGATAAGCA
GTATTGGCGTGAAAGTGCTACCGCCATCGCCGCCATGTATTTCCTGATGCAGGGAACACCGTTTATTTATCAGGGCCAGG
AACTGGGGATGACCAATACCCGCTTCACGAGTCTGGCCGATTTTAACGATATTGCCGCCAGAAACCGCTTTGCCAAACTG
CAGGTGCAGGGCATGGATGAAGCACAGATCCTGGCATTTCTCGGTCGTAGTGGGCGCGATAATTCACGAACCCCAATGCA
GTGGGACGACGGGCCTCATGCTGGCTTCAGTACCGTTACACCGTGGTTCTCGTTGAATGCCAACTTTGAACAGATTAACG
TGGCGCGTCAGCGTAACGAGCCGGATTCGGTGCTGAGTTTTTACCGGGCCTTGATCCGCCTACGCAAGCAGGATCCGATG
TGGGTCTATGGCCGCTACCAATTACAACTGGCGGCGCATCCCCATATTTACGCCTACAGCCGTAGCCTGGATCAACGGCA
AGGGTGGGTATTGTGCAACCTGAGTGGTGAAACACAACAAATTGACTCTCAACTCTTGCCATTGGGAAAAAGATCATTGT
TGTTGAGTAATTATTCCCACCAGGGTGAACGACAAATACTTCGTCCTTATGAGGCACGAATCTATCAATAG

Upstream 100 bases:

>100_bases
GCCGGTGGAGTGCTGTTATTTGTTTGACTCTCAGGGCCAGGCGTTCCAGCGCATTCTGGCGTCGGAACAGGCGCATTAAT
CAATTAAAGGAAGTCGGGAC

Downstream 100 bases:

>100_bases
GGGAAATACGGCAATAGATTGAGTTAGGCCCTAAATTAATTTCTATGGGAAAGTTATTTTAAATCGCTAACTTTCCCAGT
CAATGACTTCCCAGAAGAAT

Product: alpha amylase catalytic region

Products: NA

Alternate protein names: Oligosaccharide alpha-1,6-glucosidase 3; Sucrase-isomaltase 3; Isomaltase 3 [H]

Number of amino acids: Translated: 556; Mature: 555

Protein sequence:

>556_residues
MSSGQTVRWWKQAVVYQIYPRSFMDSNGDGIGDLNGITDKLDYLQWLGIDVIWICPMYRSPNDDNGYDISDYQAIMTEFG
TMADFDRLLAEVHARGMRLILDLVVNHTSDEHPWFIESRSSQSSAKRDWYIWRDGKNGAEPNNWESIFNGSAWKYDPGSE
QYFLHLFSERQPDLNWENPQVRTALYDMMRWWLDKGIDGFRIDAICHMKKQPGLTDMPNPQGLRYVPSFERHLNYDGLLD
YVDDLCEQVFNRYDIMTVGEMNGASAQQGEDWVGEQHGRLNMIFQFEHVKLWETSHQQSPDAGLDVMGLKEIFTRWQTLL
EGKGWNALYVENHDIPRVVSKWGDDKQYWRESATAIAAMYFLMQGTPFIYQGQELGMTNTRFTSLADFNDIAARNRFAKL
QVQGMDEAQILAFLGRSGRDNSRTPMQWDDGPHAGFSTVTPWFSLNANFEQINVARQRNEPDSVLSFYRALIRLRKQDPM
WVYGRYQLQLAAHPHIYAYSRSLDQRQGWVLCNLSGETQQIDSQLLPLGKRSLLLSNYSHQGERQILRPYEARIYQ

Sequences:

>Translated_556_residues
MSSGQTVRWWKQAVVYQIYPRSFMDSNGDGIGDLNGITDKLDYLQWLGIDVIWICPMYRSPNDDNGYDISDYQAIMTEFG
TMADFDRLLAEVHARGMRLILDLVVNHTSDEHPWFIESRSSQSSAKRDWYIWRDGKNGAEPNNWESIFNGSAWKYDPGSE
QYFLHLFSERQPDLNWENPQVRTALYDMMRWWLDKGIDGFRIDAICHMKKQPGLTDMPNPQGLRYVPSFERHLNYDGLLD
YVDDLCEQVFNRYDIMTVGEMNGASAQQGEDWVGEQHGRLNMIFQFEHVKLWETSHQQSPDAGLDVMGLKEIFTRWQTLL
EGKGWNALYVENHDIPRVVSKWGDDKQYWRESATAIAAMYFLMQGTPFIYQGQELGMTNTRFTSLADFNDIAARNRFAKL
QVQGMDEAQILAFLGRSGRDNSRTPMQWDDGPHAGFSTVTPWFSLNANFEQINVARQRNEPDSVLSFYRALIRLRKQDPM
WVYGRYQLQLAAHPHIYAYSRSLDQRQGWVLCNLSGETQQIDSQLLPLGKRSLLLSNYSHQGERQILRPYEARIYQ
>Mature_555_residues
SSGQTVRWWKQAVVYQIYPRSFMDSNGDGIGDLNGITDKLDYLQWLGIDVIWICPMYRSPNDDNGYDISDYQAIMTEFGT
MADFDRLLAEVHARGMRLILDLVVNHTSDEHPWFIESRSSQSSAKRDWYIWRDGKNGAEPNNWESIFNGSAWKYDPGSEQ
YFLHLFSERQPDLNWENPQVRTALYDMMRWWLDKGIDGFRIDAICHMKKQPGLTDMPNPQGLRYVPSFERHLNYDGLLDY
VDDLCEQVFNRYDIMTVGEMNGASAQQGEDWVGEQHGRLNMIFQFEHVKLWETSHQQSPDAGLDVMGLKEIFTRWQTLLE
GKGWNALYVENHDIPRVVSKWGDDKQYWRESATAIAAMYFLMQGTPFIYQGQELGMTNTRFTSLADFNDIAARNRFAKLQ
VQGMDEAQILAFLGRSGRDNSRTPMQWDDGPHAGFSTVTPWFSLNANFEQINVARQRNEPDSVLSFYRALIRLRKQDPMW
VYGRYQLQLAAHPHIYAYSRSLDQRQGWVLCNLSGETQQIDSQLLPLGKRSLLLSNYSHQGERQILRPYEARIYQ

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=572, Percent_Identity=31.1188811188811, Blast_Score=247, Evalue=2e-65,
Organism=Escherichia coli, GI1790687, Length=547, Percent_Identity=41.6819012797075, Blast_Score=439, Evalue=1e-124,
Organism=Escherichia coli, GI1786604, Length=227, Percent_Identity=26.8722466960352, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI87081873, Length=210, Percent_Identity=26.1904761904762, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32565753, Length=559, Percent_Identity=23.9713774597496, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI25147709, Length=490, Percent_Identity=21.2244897959184, Blast_Score=112, Evalue=6e-25,
Organism=Saccharomyces cerevisiae, GI6322245, Length=581, Percent_Identity=36.4888123924269, Blast_Score=370, Evalue=1e-103,
Organism=Saccharomyces cerevisiae, GI6319776, Length=576, Percent_Identity=37.5, Blast_Score=353, Evalue=6e-98,
Organism=Saccharomyces cerevisiae, GI6321731, Length=576, Percent_Identity=37.3263888888889, Blast_Score=351, Evalue=1e-97,
Organism=Saccharomyces cerevisiae, GI6324416, Length=577, Percent_Identity=35.8752166377816, Blast_Score=347, Evalue=4e-96,
Organism=Saccharomyces cerevisiae, GI6321726, Length=577, Percent_Identity=35.8752166377816, Blast_Score=344, Evalue=2e-95,
Organism=Saccharomyces cerevisiae, GI6322241, Length=577, Percent_Identity=35.7019064124783, Blast_Score=343, Evalue=5e-95,
Organism=Saccharomyces cerevisiae, GI6322021, Length=577, Percent_Identity=35.7019064124783, Blast_Score=343, Evalue=5e-95,
Organism=Drosophila melanogaster, GI24583745, Length=535, Percent_Identity=35.5140186915888, Blast_Score=292, Evalue=4e-79,
Organism=Drosophila melanogaster, GI24583749, Length=554, Percent_Identity=35.1985559566787, Blast_Score=286, Evalue=2e-77,
Organism=Drosophila melanogaster, GI24583747, Length=554, Percent_Identity=35.1985559566787, Blast_Score=286, Evalue=2e-77,
Organism=Drosophila melanogaster, GI24586593, Length=548, Percent_Identity=33.3941605839416, Blast_Score=266, Evalue=2e-71,
Organism=Drosophila melanogaster, GI221330053, Length=509, Percent_Identity=33.9882121807466, Blast_Score=266, Evalue=3e-71,
Organism=Drosophila melanogaster, GI24586589, Length=540, Percent_Identity=33.1481481481482, Blast_Score=255, Evalue=4e-68,
Organism=Drosophila melanogaster, GI24586597, Length=503, Percent_Identity=34.1948310139165, Blast_Score=253, Evalue=2e-67,
Organism=Drosophila melanogaster, GI24586599, Length=546, Percent_Identity=32.0512820512821, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24586587, Length=597, Percent_Identity=30.3182579564489, Blast_Score=247, Evalue=2e-65,
Organism=Drosophila melanogaster, GI45549022, Length=559, Percent_Identity=30.9481216457961, Blast_Score=243, Evalue=3e-64,
Organism=Drosophila melanogaster, GI24586591, Length=204, Percent_Identity=48.5294117647059, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI281360393, Length=488, Percent_Identity=30.5327868852459, Blast_Score=189, Evalue=4e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.10 [H]

Molecular weight: Translated: 64765; Mature: 64634

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGQTVRWWKQAVVYQIYPRSFMDSNGDGIGDLNGITDKLDYLQWLGIDVIWICPMYRS
CCCCCCHHHHHHHHHHEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCC
PNDDNGYDISDYQAIMTEFGTMADFDRLLAEVHARGMRLILDLVVNHTSDEHPWFIESRS
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
SQSSAKRDWYIWRDGKNGAEPNNWESIFNGSAWKYDPGSEQYFLHLFSERQPDLNWENPQ
CCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCH
VRTALYDMMRWWLDKGIDGFRIDAICHMKKQPGLTDMPNPQGLRYVPSFERHLNYDGLLD
HHHHHHHHHHHHHHCCCCCEEEHHEEEECCCCCCCCCCCCCCCEECCCHHHHCCCCHHHH
YVDDLCEQVFNRYDIMTVGEMNGASAQQGEDWVGEQHGRLNMIFQFEHVKLWETSHQQSP
HHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHCCCCCCEEEEEEEEEEEEECCCCCCCC
DAGLDVMGLKEIFTRWQTLLEGKGWNALYVENHDIPRVVSKWGDDKQYWRESATAIAAMY
CCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHH
FLMQGTPFIYQGQELGMTNTRFTSLADFNDIAARNRFAKLQVQGMDEAQILAFLGRSGRD
HHHCCCCEEEECCCCCCCCCCHHHHCCHHHHHHHCCEEEEEECCCCHHHHHHHHCCCCCC
NSRTPMQWDDGPHAGFSTVTPWFSLNANFEQINVARQRNEPDSVLSFYRALIRLRKQDPM
CCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCE
WVYGRYQLQLAAHPHIYAYSRSLDQRQGWVLCNLSGETQQIDSQLLPLGKRSLLLSNYSH
EEEEEEEEEEECCCEEEEECCCHHCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHCCCC
QGERQILRPYEARIYQ
CCHHHHHCHHHHHCCC
>Mature Secondary Structure 
SSGQTVRWWKQAVVYQIYPRSFMDSNGDGIGDLNGITDKLDYLQWLGIDVIWICPMYRS
CCCCCHHHHHHHHHHEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCC
PNDDNGYDISDYQAIMTEFGTMADFDRLLAEVHARGMRLILDLVVNHTSDEHPWFIESRS
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
SQSSAKRDWYIWRDGKNGAEPNNWESIFNGSAWKYDPGSEQYFLHLFSERQPDLNWENPQ
CCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCH
VRTALYDMMRWWLDKGIDGFRIDAICHMKKQPGLTDMPNPQGLRYVPSFERHLNYDGLLD
HHHHHHHHHHHHHHCCCCCEEEHHEEEECCCCCCCCCCCCCCCEECCCHHHHCCCCHHHH
YVDDLCEQVFNRYDIMTVGEMNGASAQQGEDWVGEQHGRLNMIFQFEHVKLWETSHQQSP
HHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHCCCCCCEEEEEEEEEEEEECCCCCCCC
DAGLDVMGLKEIFTRWQTLLEGKGWNALYVENHDIPRVVSKWGDDKQYWRESATAIAAMY
CCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHH
FLMQGTPFIYQGQELGMTNTRFTSLADFNDIAARNRFAKLQVQGMDEAQILAFLGRSGRD
HHHCCCCEEEECCCCCCCCCCHHHHCCHHHHHHHCCEEEEEECCCCHHHHHHHHCCCCCC
NSRTPMQWDDGPHAGFSTVTPWFSLNANFEQINVARQRNEPDSVLSFYRALIRLRKQDPM
CCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCE
WVYGRYQLQLAAHPHIYAYSRSLDQRQGWVLCNLSGETQQIDSQLLPLGKRSLLLSNYSH
EEEEEEEEEEECCCEEEEECCCHHCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHCCCC
QGERQILRPYEARIYQ
CCHHHHHCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]