| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is aguA [H]
Identifier: 157370722
GI number: 157370722
Start: 2722727
End: 2723854
Strand: Reverse
Name: aguA [H]
Synonym: Spro_2482
Alternate gene names: 157370722
Gene position: 2723854-2722727 (Counterclockwise)
Preceding gene: 157370725
Following gene: 157370720
Centisome position: 49.99
GC content: 56.83
Gene sequence:
>1128_bases ATGTCAACGCGTCGTGAATTTATTAAGCAGGCATCCCTGATTGCCGGCATGAGCCTGACGGCATCCATGGGGCTGACGTT ACCTGCCCATGCCGCGCCAGCCGTGCGAGGAGAAGGTTGGCGTATGCCGGATGAAGGCGAAGAGCAGCAACGCGCTTTTA TCGCCTTCGGTGCGCAGCGGGCTATTTGGGCTGATTACACTGCGGGTGTGCAGGATGCTTTGGGGCGCATCGCTCGGGCG ATCGCTCAATATCAACCGCTAACCGTATTTTGCCGTGAGAGTGAACGTCGGCTGGCGGAAGAAAAATGCGGCAGCCACAA TGTGACCTTTATTGTCACCGAGCTTGATGATATCTGGATGCGTGACATTGGCGCCAATTTTGTCGTTAATCAGGCGGGCA AACTGGGGGCGGTGGACTTTAACTTTAACGGCTGGGGCAACAAACAGCAGCACCGCTACGATGCGCGTTTGGCGGCGTTT GAAGCCCGCCATTACGGTGTGGCCAACATATGGCGCAGTGGACTGGTGGGGGAAGGCGGCGGCATCGAAGTGGATGGCCA CGGCATCGGTATCATGACCGAGAGCAGTTGGGTCAACAAGAACCGTAACCCAGGCTGGAGTCGTGATCGGGTGGAGCAAG AGTTGAAAGAGATGCTCGGGCTGCGCAAAATCATCTGGCTGCCGGGGATTAAAGGCAAAGACATCACCGACGCCCACGTC GATTTCTACGCCCGTTTTGCCAGTCCGGGAGTCGTGGTGGCCAATCTGGATACCGATCCCGACTCTTACGACCATAAAGT GACCCAGGCGCATTTGGCGATCCTCAAACAGGCGACCGATGCCGATGGCCGCAAGTTGCAGATACATACCATGTCGCCGC CGATGGATCCGCGCCGTAGCCGTTTCAGCAAGGGTAATCCGGACTTTGCGGCGGGATATATCAATTACTTTGTGATCAAC GGCGCGGTTATCGCTCCCGAATTTGGTGATCCGGAAGCGGATGGCGAAGCGTTGCGACTCTTAACCGGGCTTTATCCCGA TCGTGAAGTCGTGCAGTTGAATATTGACGCCATTGCCGCAGGCGGCGGGGGCATTCACTGCGTGACCCATCAACTGCCGG CGGTTTAA
Upstream 100 bases:
>100_bases TATGGCAGCGTTGGAAGCTTTAACATGATTACATCGAAACCACGCCGTCTTTCACTGAACAGAATACCTTATTTAAATGA CGGCAATACAGGAGCTAAGC
Downstream 100 bases:
>100_bases GTCGGGTAACCGTGCAGGGCCGGCTCTGGCCCTGCAATCACACTTGAGGCCCCAGACCGTGGGTCAACAGCGTAATGGCG TGGCGGGCGATAACATCGGC
Product: agmatine deiminase
Products: NA
Alternate protein names: Agmatine iminohydrolase [H]
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MSTRREFIKQASLIAGMSLTASMGLTLPAHAAPAVRGEGWRMPDEGEEQQRAFIAFGAQRAIWADYTAGVQDALGRIARA IAQYQPLTVFCRESERRLAEEKCGSHNVTFIVTELDDIWMRDIGANFVVNQAGKLGAVDFNFNGWGNKQQHRYDARLAAF EARHYGVANIWRSGLVGEGGGIEVDGHGIGIMTESSWVNKNRNPGWSRDRVEQELKEMLGLRKIIWLPGIKGKDITDAHV DFYARFASPGVVVANLDTDPDSYDHKVTQAHLAILKQATDADGRKLQIHTMSPPMDPRRSRFSKGNPDFAAGYINYFVIN GAVIAPEFGDPEADGEALRLLTGLYPDREVVQLNIDAIAAGGGGIHCVTHQLPAV
Sequences:
>Translated_375_residues MSTRREFIKQASLIAGMSLTASMGLTLPAHAAPAVRGEGWRMPDEGEEQQRAFIAFGAQRAIWADYTAGVQDALGRIARA IAQYQPLTVFCRESERRLAEEKCGSHNVTFIVTELDDIWMRDIGANFVVNQAGKLGAVDFNFNGWGNKQQHRYDARLAAF EARHYGVANIWRSGLVGEGGGIEVDGHGIGIMTESSWVNKNRNPGWSRDRVEQELKEMLGLRKIIWLPGIKGKDITDAHV DFYARFASPGVVVANLDTDPDSYDHKVTQAHLAILKQATDADGRKLQIHTMSPPMDPRRSRFSKGNPDFAAGYINYFVIN GAVIAPEFGDPEADGEALRLLTGLYPDREVVQLNIDAIAAGGGGIHCVTHQLPAV >Mature_374_residues STRREFIKQASLIAGMSLTASMGLTLPAHAAPAVRGEGWRMPDEGEEQQRAFIAFGAQRAIWADYTAGVQDALGRIARAI AQYQPLTVFCRESERRLAEEKCGSHNVTFIVTELDDIWMRDIGANFVVNQAGKLGAVDFNFNGWGNKQQHRYDARLAAFE ARHYGVANIWRSGLVGEGGGIEVDGHGIGIMTESSWVNKNRNPGWSRDRVEQELKEMLGLRKIIWLPGIKGKDITDAHVD FYARFASPGVVVANLDTDPDSYDHKVTQAHLAILKQATDADGRKLQIHTMSPPMDPRRSRFSKGNPDFAAGYINYFVING AVIAPEFGDPEADGEALRLLTGLYPDREVVQLNIDAIAAGGGGIHCVTHQLPAV
Specific function: Unknown
COG id: COG2957
COG function: function code E; Peptidylarginine deiminase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the agmatine deiminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017754 - InterPro: IPR007466 [H]
Pfam domain/function: PF04371 PAD_porph [H]
EC number: =3.5.3.12 [H]
Molecular weight: Translated: 41183; Mature: 41052
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRREFIKQASLIAGMSLTASMGLTLPAHAAPAVRGEGWRMPDEGEEQQRAFIAFGAQR CCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEECCCC AIWADYTAGVQDALGRIARAIAQYQPLTVFCRESERRLAEEKCGSHNVTFIVTELDDIWM CEEHHHHCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEEECCHHHHH RDIGANFVVNQAGKLGAVDFNFNGWGNKQQHRYDARLAAFEARHYGVANIWRSGLVGEGG HHCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC GIEVDGHGIGIMTESSWVNKNRNPGWSRDRVEQELKEMLGLRKIIWLPGIKGKDITDAHV CEEECCCEEEEEECCHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHH DFYARFASPGVVVANLDTDPDSYDHKVTQAHLAILKQATDADGRKLQIHTMSPPMDPRRS HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHH RFSKGNPDFAAGYINYFVINGAVIAPEFGDPEADGEALRLLTGLYPDREVVQLNIDAIAA HCCCCCCCHHHHEEEEEEEECEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEEEE GGGGIHCVTHQLPAV CCCCEEEECCCCCCC >Mature Secondary Structure STRREFIKQASLIAGMSLTASMGLTLPAHAAPAVRGEGWRMPDEGEEQQRAFIAFGAQR CHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEECCCC AIWADYTAGVQDALGRIARAIAQYQPLTVFCRESERRLAEEKCGSHNVTFIVTELDDIWM CEEHHHHCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEEECCHHHHH RDIGANFVVNQAGKLGAVDFNFNGWGNKQQHRYDARLAAFEARHYGVANIWRSGLVGEGG HHCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC GIEVDGHGIGIMTESSWVNKNRNPGWSRDRVEQELKEMLGLRKIIWLPGIKGKDITDAHV CEEECCCEEEEEECCHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHH DFYARFASPGVVVANLDTDPDSYDHKVTQAHLAILKQATDADGRKLQIHTMSPPMDPRRS HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHH RFSKGNPDFAAGYINYFVINGAVIAPEFGDPEADGEALRLLTGLYPDREVVQLNIDAIAA HCCCCCCCHHHHEEEEEEEECEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEEEE GGGGIHCVTHQLPAV CCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]