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The map label for this gene is rcsB [C]

Identifier: 157370644

GI number: 157370644

Start: 2626393

End: 2626875

Strand: Reverse

Name: rcsB [C]

Synonym: Spro_2404

Alternate gene names: 157370644

Gene position: 2626875-2626393 (Counterclockwise)

Preceding gene: 157370645

Following gene: 157370640

Centisome position: 48.21

GC content: 59.42

Gene sequence:

>483_bases
ATGATGACCGTATTGTTACCCCCGCATCTGGCAGAGAAATTAACGCCGAACGAGCGTATGGTGCTGCAGGCCCTGCTCAA
CGGGCAGGACCTGACTACCATTGCCCAACGGCGTAACCGCAATATCCGCACCGTCAGCAACCACAAACAACGGGCGATGG
AAAAACTGGGCCTGAACAACAACGCCATGCTGTATGCGCTGGCCGCCCTGCTGAGCCCGCCCTTGCCGCAGGCCTCCCCT
CAGCAAATGCAGTCGCTCTCACCGCGGGAGCATCGGGTGCTGGCGGGCCTGCTGCAGGGTAAAACGGTGGGCGCGATTGC
CCGCGAGCAGCATAAAAGCATCAAAACCATCAGCCTGCAAAAGCAGCGGCTGATGGAGAAACTGAGGTTATGCAGTGCGG
TAGACTTGTTCAGGTCTGCGCCCGGACAGGCGCAGACGCTGTTGGCCAACTGGGGGCAGGTTTTTAAGACGTCGGCGGGT
TAA

Upstream 100 bases:

>100_bases
AGCCGGGGTGCATTGTCGTTTGTACTGCTGGATTAATCACCCTCGCCCACCGGGCAAGGACAGTTCGCCGGAAAGGCGTT
TAATCGGACAGGAGAGTCCC

Downstream 100 bases:

>100_bases
CCCGATATTCCCTCTTCATTGGAAGAGGGAATAAGTCACCTCAACAGAGCAGGATTAAGAGGCGGAAAGATCGATAACCA
TACGGCCACGAATGGTGCCG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MMTVLLPPHLAEKLTPNERMVLQALLNGQDLTTIAQRRNRNIRTVSNHKQRAMEKLGLNNNAMLYALAALLSPPLPQASP
QQMQSLSPREHRVLAGLLQGKTVGAIAREQHKSIKTISLQKQRLMEKLRLCSAVDLFRSAPGQAQTLLANWGQVFKTSAG

Sequences:

>Translated_160_residues
MMTVLLPPHLAEKLTPNERMVLQALLNGQDLTTIAQRRNRNIRTVSNHKQRAMEKLGLNNNAMLYALAALLSPPLPQASP
QQMQSLSPREHRVLAGLLQGKTVGAIAREQHKSIKTISLQKQRLMEKLRLCSAVDLFRSAPGQAQTLLANWGQVFKTSAG
>Mature_160_residues
MMTVLLPPHLAEKLTPNERMVLQALLNGQDLTTIAQRRNRNIRTVSNHKQRAMEKLGLNNNAMLYALAALLSPPLPQASP
QQMQSLSPREHRVLAGLLQGKTVGAIAREQHKSIKTISLQKQRLMEKLRLCSAVDLFRSAPGQAQTLLANWGQVFKTSAG

Specific function: Rcsb Is A Member Of The Two-Component Regulatory System Rcsb/Rcsc, Which Regulates The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. Rcsb Acts As The Effector. Additional Control Is Provided By The Dependence On The Alternate Sigma Facto

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17735; Mature: 17735

Theoretical pI: Translated: 11.77; Mature: 11.77

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTVLLPPHLAEKLTPNERMVLQALLNGQDLTTIAQRRNRNIRTVSNHKQRAMEKLGLNN
CCEEECCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
NAMLYALAALLSPPLPQASPQQMQSLSPREHRVLAGLLQGKTVGAIAREQHKSIKTISLQ
CHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KQRLMEKLRLCSAVDLFRSAPGQAQTLLANWGQVFKTSAG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMTVLLPPHLAEKLTPNERMVLQALLNGQDLTTIAQRRNRNIRTVSNHKQRAMEKLGLNN
CCEEECCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
NAMLYALAALLSPPLPQASPQQMQSLSPREHRVLAGLLQGKTVGAIAREQHKSIKTISLQ
CHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KQRLMEKLRLCSAVDLFRSAPGQAQTLLANWGQVFKTSAG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA