| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370621
Identifier: 157370621
GI number: 157370621
Start: 2601683
End: 2603284
Strand: Reverse
Name: 157370621
Synonym: Spro_2381
Alternate gene names: NA
Gene position: 2603284-2601683 (Counterclockwise)
Preceding gene: 157370622
Following gene: 157370620
Centisome position: 47.78
GC content: 46.88
Gene sequence:
>1602_bases ATGATCACTCAAGGTTATACGTCAGATGAGAAGACTATTGTTAAAAATGTCATCAGCAAATATAGCAATGCCGGTCTGTT TATTATTGAACCCGGCGATCCCTTGCTGGTCAGCTTTTACGATATTCAATTAAAACTTGCCGGTCTTACCCCGGGTAATA CTCCGCAGTTTACTCAATGCTGGCAACAGGCAAAACGGCTTAAACTCAGTGCCGGCCGGTTGAGCGATGCCGGTAATGGC TCTGCTCAACCGGTATACAGCATTGTCCGGCTGGACTCTACCGACGGTCGAAATTATCGTGCCAATGCCATAGGTTCCCT GCCTGTCTCGGCGACAAACGTAACGCAGACCCTTGGGCTGTTTGACGGCGAAGCCGCCAATGTAGGGCCGGTTAACTACA ACCAGGCCTATGTCTACGCCGCAGACTGCGCCCTGAGTGCCGATGGGGTTTATCCGGGTAGCCAGATTGCTGCAGATTAT CCGGTCACGGTGATTTATACCTTTGCACAGACTATCGGTAACCAGACGGTGTACGGGGCAGAGATCATTACCAGCCAGAG TTATCCAAAAAATATCTATAATGAGTCACCGCGGAGTCTTATTAATCCAAATGAAATCAAGATCTGCCTGACCCGCGATG AGGCCGACTGTGACTACCGTAATAATTATGACGGTTCGGTCAGGGTGCCTATTAAAGGCAATATTACCTACCTGGGGCAA ATTGAGCTCAACGGTGGTCAGCCTGTTAAAGCCAGCAATACCATTTATTTGATACGGACTCGTGCCGGCGGCGATCCTGT CACCCCTTTCGGTAACTACAATATTTTCAACTCGGCCAACACCCGAATCATTGGTGACAATATCTCCTGGGATCTGGACT GGCTCAGGTTCAATCAGGTTGACTTTGACTCCGGCGAGTGGATTTATTATGTATTCAAAGTCATTCTCAATGTCGATGGA AAAAGCATTGCGACCTTTATCACCAACGCACCTAAAAGCCTTGAGCCAGACCAGCGTTTCTTAAATACTGAGCTATTAAA ACCCATGCGTATTGTTTATGGCTGCCTGGCTGAAAACACAAGAATTCTGATGCAGGACGGTGGTGAAAAATTAATTTCCG ACCTGACTATCGGAGAATACGTATTATCGAGAAACAATATCCCGCTCAGAATTGAAGCTATCACTAATGGCCAGGAGCGC AATTTCATCGAAATAACCACACAAAACAGCAAAGGTAAAATAAGAACCATCACCAGCAGCCTTGGCCACCCTTTTATTAC CTCAACCGGTGTAGTGATTGCTCGCGAATTGAATCACACCTCTAAATTAATCACCCTGGAGGGTGAGTGCGAAATTATAA GCATTGAACAACAGCAAGGAGAACTGAAGGTATATAACCTGCAGCTGACGGCTGAAGCGCCCGTTGATAAAGGTCTGTAC GATGACAACACCCTGTATGCCAACGGTATATTGGTCGGTGACCTCCAGATGCAACGTATCTATGAGGACGAATATTACCA GCGTCCGGTGAATATCCTGAGCAAACTGCCAAAAGAATGGCATCAGGATTATCAAAACCATCTCAACGCGGCGGGTAAAT AA
Upstream 100 bases:
>100_bases CCTGTAAATAAATCATTAATCGCTTAATTAGCTATGGTTTGGTTCATTGCCACCATCGCTTGCGCACGTTTATGTCTGAA ACTTATTGGGTACTGATATT
Downstream 100 bases:
>100_bases CTCATGTATCAGGGCTACCCGGATTTTCAGCAGATTATCATTAGCGATCGGCTTAGGTTTATCGCTACCTATCAACAGAA TGATAGCTATTTCTTATACC
Product: hedgehog/intein hint domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MITQGYTSDEKTIVKNVISKYSNAGLFIIEPGDPLLVSFYDIQLKLAGLTPGNTPQFTQCWQQAKRLKLSAGRLSDAGNG SAQPVYSIVRLDSTDGRNYRANAIGSLPVSATNVTQTLGLFDGEAANVGPVNYNQAYVYAADCALSADGVYPGSQIAADY PVTVIYTFAQTIGNQTVYGAEIITSQSYPKNIYNESPRSLINPNEIKICLTRDEADCDYRNNYDGSVRVPIKGNITYLGQ IELNGGQPVKASNTIYLIRTRAGGDPVTPFGNYNIFNSANTRIIGDNISWDLDWLRFNQVDFDSGEWIYYVFKVILNVDG KSIATFITNAPKSLEPDQRFLNTELLKPMRIVYGCLAENTRILMQDGGEKLISDLTIGEYVLSRNNIPLRIEAITNGQER NFIEITTQNSKGKIRTITSSLGHPFITSTGVVIARELNHTSKLITLEGECEIISIEQQQGELKVYNLQLTAEAPVDKGLY DDNTLYANGILVGDLQMQRIYEDEYYQRPVNILSKLPKEWHQDYQNHLNAAGK
Sequences:
>Translated_533_residues MITQGYTSDEKTIVKNVISKYSNAGLFIIEPGDPLLVSFYDIQLKLAGLTPGNTPQFTQCWQQAKRLKLSAGRLSDAGNG SAQPVYSIVRLDSTDGRNYRANAIGSLPVSATNVTQTLGLFDGEAANVGPVNYNQAYVYAADCALSADGVYPGSQIAADY PVTVIYTFAQTIGNQTVYGAEIITSQSYPKNIYNESPRSLINPNEIKICLTRDEADCDYRNNYDGSVRVPIKGNITYLGQ IELNGGQPVKASNTIYLIRTRAGGDPVTPFGNYNIFNSANTRIIGDNISWDLDWLRFNQVDFDSGEWIYYVFKVILNVDG KSIATFITNAPKSLEPDQRFLNTELLKPMRIVYGCLAENTRILMQDGGEKLISDLTIGEYVLSRNNIPLRIEAITNGQER NFIEITTQNSKGKIRTITSSLGHPFITSTGVVIARELNHTSKLITLEGECEIISIEQQQGELKVYNLQLTAEAPVDKGLY DDNTLYANGILVGDLQMQRIYEDEYYQRPVNILSKLPKEWHQDYQNHLNAAGK >Mature_533_residues MITQGYTSDEKTIVKNVISKYSNAGLFIIEPGDPLLVSFYDIQLKLAGLTPGNTPQFTQCWQQAKRLKLSAGRLSDAGNG SAQPVYSIVRLDSTDGRNYRANAIGSLPVSATNVTQTLGLFDGEAANVGPVNYNQAYVYAADCALSADGVYPGSQIAADY PVTVIYTFAQTIGNQTVYGAEIITSQSYPKNIYNESPRSLINPNEIKICLTRDEADCDYRNNYDGSVRVPIKGNITYLGQ IELNGGQPVKASNTIYLIRTRAGGDPVTPFGNYNIFNSANTRIIGDNISWDLDWLRFNQVDFDSGEWIYYVFKVILNVDG KSIATFITNAPKSLEPDQRFLNTELLKPMRIVYGCLAENTRILMQDGGEKLISDLTIGEYVLSRNNIPLRIEAITNGQER NFIEITTQNSKGKIRTITSSLGHPFITSTGVVIARELNHTSKLITLEGECEIISIEQQQGELKVYNLQLTAEAPVDKGLY DDNTLYANGILVGDLQMQRIYEDEYYQRPVNILSKLPKEWHQDYQNHLNAAGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59180; Mature: 59180
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS50817 INTEIN_N_TER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITQGYTSDEKTIVKNVISKYSNAGLFIIEPGDPLLVSFYDIQLKLAGLTPGNTPQFTQC CCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEEEEEECCCCCCCHHHHH WQQAKRLKLSAGRLSDAGNGSAQPVYSIVRLDSTDGRNYRANAIGSLPVSATNVTQTLGL HHHHHHEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECEEECCCCCCCCHHHHHCC FDGEAANVGPVNYNQAYVYAADCALSADGVYPGSQIAADYPVTVIYTFAQTIGNQTVYGA CCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHCCCEEEEE EIITSQSYPKNIYNESPRSLINPNEIKICLTRDEADCDYRNNYDGSVRVPIKGNITYLGQ EEEECCCCCCHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEEE IELNGGQPVKASNTIYLIRTRAGGDPVTPFGNYNIFNSANTRIIGDNISWDLDWLRFNQV EEECCCCCEECCCEEEEEEEECCCCCCCCCCCEEEECCCCCEEEECCCCEEEEEEEEEEE DFDSGEWIYYVFKVILNVDGKSIATFITNAPKSLEPDQRFLNTELLKPMRIVYGCLAENT CCCCCCHHHEEEEHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC RILMQDGGEKLISDLTIGEYVLSRNNIPLRIEAITNGQERNFIEITTQNSKGKIRTITSS EEEEECCCHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEHH LGHPFITSTGVVIARELNHTSKLITLEGECEIISIEQQQGELKVYNLQLTAEAPVDKGLY CCCCEEECCCEEEEEECCCCEEEEEEECCEEEEEEECCCCCEEEEEEEEEECCCCCCCCC DDNTLYANGILVGDLQMQRIYEDEYYQRPVNILSKLPKEWHQDYQNHLNAAGK CCCEEEECCEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MITQGYTSDEKTIVKNVISKYSNAGLFIIEPGDPLLVSFYDIQLKLAGLTPGNTPQFTQC CCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEEEEEECCCCCCCHHHHH WQQAKRLKLSAGRLSDAGNGSAQPVYSIVRLDSTDGRNYRANAIGSLPVSATNVTQTLGL HHHHHHEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECEEECCCCCCCCHHHHHCC FDGEAANVGPVNYNQAYVYAADCALSADGVYPGSQIAADYPVTVIYTFAQTIGNQTVYGA CCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHCCCEEEEE EIITSQSYPKNIYNESPRSLINPNEIKICLTRDEADCDYRNNYDGSVRVPIKGNITYLGQ EEEECCCCCCHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEEE IELNGGQPVKASNTIYLIRTRAGGDPVTPFGNYNIFNSANTRIIGDNISWDLDWLRFNQV EEECCCCCEECCCEEEEEEEECCCCCCCCCCCEEEECCCCCEEEECCCCEEEEEEEEEEE DFDSGEWIYYVFKVILNVDGKSIATFITNAPKSLEPDQRFLNTELLKPMRIVYGCLAENT CCCCCCHHHEEEEHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC RILMQDGGEKLISDLTIGEYVLSRNNIPLRIEAITNGQERNFIEITTQNSKGKIRTITSS EEEEECCCHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEHH LGHPFITSTGVVIARELNHTSKLITLEGECEIISIEQQQGELKVYNLQLTAEAPVDKGLY CCCCEEECCCEEEEEECCCCEEEEEEECCEEEEEEECCCCCEEEEEEEEEECCCCCCCCC DDNTLYANGILVGDLQMQRIYEDEYYQRPVNILSKLPKEWHQDYQNHLNAAGK CCCEEEECCEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA