| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yidS [C]
Identifier: 157370551
GI number: 157370551
Start: 2517458
End: 2518609
Strand: Reverse
Name: yidS [C]
Synonym: Spro_2311
Alternate gene names: 157370551
Gene position: 2518609-2517458 (Counterclockwise)
Preceding gene: 157370558
Following gene: 157370550
Centisome position: 46.22
GC content: 58.85
Gene sequence:
>1152_bases ATGATGAGCAAACAACAACGCATTGCCGTGGTCGGTGCCGGTCTGGGTGGCGCCGCCGCCGCCGGTCTGCTGCAAAAAGC CGGCTTTATCGTCGACCTGTACGAACAGAGCCCGGTGTTTTCCCGTCTGGGGGCCGGCATCCATATGGGGCCAAACGTAC TGAAGATTTTCCGCCGTCTCGGTATTGAGCAACCGCTGGAACAAATGGCCTCGCATCCGGATTTCTGGTTCAGCCGCGAC GCCGAAAGCGGTGACTATTTGTCGCGTATTGAACTGGGGGCCTTTGCCCGTAAAGAGTACGGTGCGGCTTACGTGACGGT GCACCGGGGCGATTTACAGGCGTTGCAGATGGCGGCCCTGCAACCGGGCAGCGTGCATTTTGGCAAGTGTCTGAGCAAAA TTGAGGAGCGTGACAACCAGGTGGTGCTGAACTTTGCCGATGGCACCCAGGCCAGCGCCGATATCGTGATTGGTGCCGAT GGTATCAACTCACGTATTCGCGAACATCTGCTGGGGGCAGAAGCGCCAACCTACAGCGGCTGGGTTGCCCACCGCGCGTT GATCCGCGGTGAGAAGCTGGCCAAATACAATCTGAGCTTTGAAGACTGTGTGAAGTGGTGGTCGGCAGATCGTCACCTGA TGGTCTATTACACCACCCAAAAACGCGACGAATATTACTACGTCAGCGGTGTGCCGCACCCGGCATGGGATTTCCAGGGC AGCTTTATCGACAGCAGCCGCGAGGAAATGTACGAGACCTTCGCCGGTTATCACCCGATTGTGCAAGCGCTGATCGAATC CAGCGAACAGGTCACCAAATGGCCACTGTTGAACCGTAAGCCCCTGCCGCTGTGGAGCGAAGGTCGCATGGTGCTGCTCG GCGATGCCTGCCACCCAATGAAACCGCACATGGCGCAAGGCGCGGCGATGGCGATCGAAGACGCCGCTATGCTGGCGCGC TGTCTGCAGGAAACCGGCCTGAGCGACTACCGCACCGCTTTCCAACTGTATGAAGCCAACCGTAAGGAACGCGCCTCTCG CGTGCAGGCCGTCTCCAATGCCAACACCTTCCTGCGCACTCAGGAAGATCCGGCCTGGGTCTACGGTTATGACCTGTACG CACAGGCGCTGAAATCGGAGAACGCCGCATGA
Upstream 100 bases:
>100_bases TAACACTTGTGCAACTTTGCGTTATTTAGCGTATACACTATAAATCGATCATCCGGCATCACTGCAGATGCCAGGTAAAA AACCAACAGTCAGGGGAATA
Downstream 100 bases:
>100_bases GCCATTTTCTGTATGGCGCCAACGTGCAGGCCAACGGCATCCGCCAGCATTACCTGCGCTATGGCGGCCAGGGGCCGGTA CTGATCCTGATCCCCGGAAT
Product: FAD-binding monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MMSKQQRIAVVGAGLGGAAAAGLLQKAGFIVDLYEQSPVFSRLGAGIHMGPNVLKIFRRLGIEQPLEQMASHPDFWFSRD AESGDYLSRIELGAFARKEYGAAYVTVHRGDLQALQMAALQPGSVHFGKCLSKIEERDNQVVLNFADGTQASADIVIGAD GINSRIREHLLGAEAPTYSGWVAHRALIRGEKLAKYNLSFEDCVKWWSADRHLMVYYTTQKRDEYYYVSGVPHPAWDFQG SFIDSSREEMYETFAGYHPIVQALIESSEQVTKWPLLNRKPLPLWSEGRMVLLGDACHPMKPHMAQGAAMAIEDAAMLAR CLQETGLSDYRTAFQLYEANRKERASRVQAVSNANTFLRTQEDPAWVYGYDLYAQALKSENAA
Sequences:
>Translated_383_residues MMSKQQRIAVVGAGLGGAAAAGLLQKAGFIVDLYEQSPVFSRLGAGIHMGPNVLKIFRRLGIEQPLEQMASHPDFWFSRD AESGDYLSRIELGAFARKEYGAAYVTVHRGDLQALQMAALQPGSVHFGKCLSKIEERDNQVVLNFADGTQASADIVIGAD GINSRIREHLLGAEAPTYSGWVAHRALIRGEKLAKYNLSFEDCVKWWSADRHLMVYYTTQKRDEYYYVSGVPHPAWDFQG SFIDSSREEMYETFAGYHPIVQALIESSEQVTKWPLLNRKPLPLWSEGRMVLLGDACHPMKPHMAQGAAMAIEDAAMLAR CLQETGLSDYRTAFQLYEANRKERASRVQAVSNANTFLRTQEDPAWVYGYDLYAQALKSENAA >Mature_383_residues MMSKQQRIAVVGAGLGGAAAAGLLQKAGFIVDLYEQSPVFSRLGAGIHMGPNVLKIFRRLGIEQPLEQMASHPDFWFSRD AESGDYLSRIELGAFARKEYGAAYVTVHRGDLQALQMAALQPGSVHFGKCLSKIEERDNQVVLNFADGTQASADIVIGAD GINSRIREHLLGAEAPTYSGWVAHRALIRGEKLAKYNLSFEDCVKWWSADRHLMVYYTTQKRDEYYYVSGVPHPAWDFQG SFIDSSREEMYETFAGYHPIVQALIESSEQVTKWPLLNRKPLPLWSEGRMVLLGDACHPMKPHMAQGAAMAIEDAAMLAR CLQETGLSDYRTAFQLYEANRKERASRVQAVSNANTFLRTQEDPAWVYGYDLYAQALKSENAA
Specific function: Catalyzes the oxidative decarboxylation of 6- hydroxynicotinic acid to 2,5-dihydroxypyridine. Uses NADH in preference to NADPH as an electron donor [H]
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.114 [H]
Molecular weight: Translated: 42740; Mature: 42740
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSKQQRIAVVGAGLGGAAAAGLLQKAGFIVDLYEQSPVFSRLGAGIHMGPNVLKIFRRL CCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCHHHHHHHHHH GIEQPLEQMASHPDFWFSRDAESGDYLSRIELGAFARKEYGAAYVTVHRGDLQALQMAAL CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHC QPGSVHFGKCLSKIEERDNQVVLNFADGTQASADIVIGADGINSRIREHLLGAEAPTYSG CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCH WVAHRALIRGEKLAKYNLSFEDCVKWWSADRHLMVYYTTQKRDEYYYVSGVPHPAWDFQG HHHHHHHHHCCHHHEECCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCC SFIDSSREEMYETFAGYHPIVQALIESSEQVTKWPLLNRKPLPLWSEGRMVLLGDACHPM CCCCCHHHHHHHHHHCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCC KPHMAQGAAMAIEDAAMLARCLQETGLSDYRTAFQLYEANRKERASRVQAVSNANTFLRT CCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE QEDPAWVYGYDLYAQALKSENAA CCCCCEEEHHHHHHHHHHCCCCC >Mature Secondary Structure MMSKQQRIAVVGAGLGGAAAAGLLQKAGFIVDLYEQSPVFSRLGAGIHMGPNVLKIFRRL CCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCHHHHHHHHHH GIEQPLEQMASHPDFWFSRDAESGDYLSRIELGAFARKEYGAAYVTVHRGDLQALQMAAL CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHC QPGSVHFGKCLSKIEERDNQVVLNFADGTQASADIVIGADGINSRIREHLLGAEAPTYSG CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCH WVAHRALIRGEKLAKYNLSFEDCVKWWSADRHLMVYYTTQKRDEYYYVSGVPHPAWDFQG HHHHHHHHHCCHHHEECCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCC SFIDSSREEMYETFAGYHPIVQALIESSEQVTKWPLLNRKPLPLWSEGRMVLLGDACHPM CCCCCHHHHHHHHHHCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCC KPHMAQGAAMAIEDAAMLARCLQETGLSDYRTAFQLYEANRKERASRVQAVSNANTFLRT CCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE QEDPAWVYGYDLYAQALKSENAA CCCCCEEEHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA