Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is ydjH [C]

Identifier: 157370534

GI number: 157370534

Start: 2497197

End: 2498150

Strand: Reverse

Name: ydjH [C]

Synonym: Spro_2294

Alternate gene names: 157370534

Gene position: 2498150-2497197 (Counterclockwise)

Preceding gene: 157370535

Following gene: 157370533

Centisome position: 45.85

GC content: 61.95

Gene sequence:

>954_bases
ATGATGAGCACCAATACCCGGCCCACGCTGTACGTGGTGGGCAATATCAACGTCGATGTGATCATGAGCACCTTGCAGCA
GTGGCCGCAAAAAGGCACCGAGGCGATGCTGGATCACAGCGAACTGCGCCCCGGCGGTTCGGCCGGTAACTGCGCACTGG
CCCTGGCGGCGCTGGAAACCCCTTACCGGCTGGTGGCCAATCAGGGCAACGACTATTTCAGCCCCTGGCTGGCGCAACTG
TTCCCGGAAAGCTCGCTGTACTGGCCGACCTACAGTTGCGAAACCTCGCTGACCTTCGGTGTCACCCACCCCGACAACGA
GCGCACCTTTTTCAGCAATCAGGGCCATATCACCCGCCTGAGTCAGGACGACGTATTGCATCAGATCCCGCTGTTTGCCG
GTAATGGCGACACCATTTTGCTGTGCGGCACCTTCCTGTGTACCACCCTGTTGGCGGAATACCCGGCGCTGCTGCAAACC
CTGCGCCAGCGCGGCTATCGCATCGCGGTTGATACCGGCTGGCCGCCGCAGGGCTGGAGCGATACGCTGCGGGGGCAGAT
CGCCGACTGGCTGCCGTTCTGCGACATCCTGTTGCTCAATGAAGTGGAAACCTGTGGCATGGCAGGTCATGAAGATTTGT
ACACCGCCGCCCGGACGCTGAACCGGCAACAGCCAGCAGATGCCGCCTGCGTGGTGAAATGCGGCCCGGACGGCGCACGT
ATGTGGTGTGGCGAACGGCAGCTGCAGGCGGCGGCACATCCGATCAAGGTGGTCGATACCATAGGTGCCGGCGACAGTTT
TAACGCCGGTTTCCTGAGCGCTTGCCTGCACGGCCATTCGGCTGCGGTAGCGCTGCGTTGGGGCATTCGCGCCGCCAGCC
ACGCCATCAGCAGTTCGCCACGTCAGTATCTGGACTGGAACACGCTGAAAACCTGCGCCGGAGAAATGGTCTGA

Upstream 100 bases:

>100_bases
GCCATTCCACCTCTTTTTATTGCCATCTGGCTGCAAAAAACGCTGGTTAGCGGCTTAACCAGCGGTGGCAGCAAAGGCTA
ATTTACTCAGGGAAATTAAC

Downstream 100 bases:

>100_bases
TGGCAAGTGTCGAACTGGTAAAAGTCGCCAAATACTATGGCAAGCAGCGGGTGCTGAATCCGTTGGATCTGACCATCCCC
GACGGCAGCTTTACCGTGCT

Product: ribokinase-like domain-containing protein

Products: NA

Alternate protein names: Carbohydrate Kinase; Ribokinase-Like Domain-Containing Protein; Sugar Kinase Protein; Ribokinase; Argininosuccinate Lyase; Sugar Kinase; Kinase; Ribokinase Family Sugar Kinase; PfkB Domain-Containing Protein; 2-Dehydro-3-Deoxygluconokinase; ATP-Dependent Phosphofructokinase

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MMSTNTRPTLYVVGNINVDVIMSTLQQWPQKGTEAMLDHSELRPGGSAGNCALALAALETPYRLVANQGNDYFSPWLAQL
FPESSLYWPTYSCETSLTFGVTHPDNERTFFSNQGHITRLSQDDVLHQIPLFAGNGDTILLCGTFLCTTLLAEYPALLQT
LRQRGYRIAVDTGWPPQGWSDTLRGQIADWLPFCDILLLNEVETCGMAGHEDLYTAARTLNRQQPADAACVVKCGPDGAR
MWCGERQLQAAAHPIKVVDTIGAGDSFNAGFLSACLHGHSAAVALRWGIRAASHAISSSPRQYLDWNTLKTCAGEMV

Sequences:

>Translated_317_residues
MMSTNTRPTLYVVGNINVDVIMSTLQQWPQKGTEAMLDHSELRPGGSAGNCALALAALETPYRLVANQGNDYFSPWLAQL
FPESSLYWPTYSCETSLTFGVTHPDNERTFFSNQGHITRLSQDDVLHQIPLFAGNGDTILLCGTFLCTTLLAEYPALLQT
LRQRGYRIAVDTGWPPQGWSDTLRGQIADWLPFCDILLLNEVETCGMAGHEDLYTAARTLNRQQPADAACVVKCGPDGAR
MWCGERQLQAAAHPIKVVDTIGAGDSFNAGFLSACLHGHSAAVALRWGIRAASHAISSSPRQYLDWNTLKTCAGEMV
>Mature_317_residues
MMSTNTRPTLYVVGNINVDVIMSTLQQWPQKGTEAMLDHSELRPGGSAGNCALALAALETPYRLVANQGNDYFSPWLAQL
FPESSLYWPTYSCETSLTFGVTHPDNERTFFSNQGHITRLSQDDVLHQIPLFAGNGDTILLCGTFLCTTLLAEYPALLQT
LRQRGYRIAVDTGWPPQGWSDTLRGQIADWLPFCDILLLNEVETCGMAGHEDLYTAARTLNRQQPADAACVVKCGPDGAR
MWCGERQLQAAAHPIKVVDTIGAGDSFNAGFLSACLHGHSAAVALRWGIRAASHAISSSPRQYLDWNTLKTCAGEMV

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081971, Length=276, Percent_Identity=27.1739130434783, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34682; Mature: 34682

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSTNTRPTLYVVGNINVDVIMSTLQQWPQKGTEAMLDHSELRPGGSAGNCALALAALET
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHEEEEHHCC
PYRLVANQGNDYFSPWLAQLFPESSLYWPTYSCETSLTFGVTHPDNERTFFSNQGHITRL
CHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCEEEE
SQDDVLHQIPLFAGNGDTILLCGTFLCTTLLAEYPALLQTLRQRGYRIAVDTGWPPQGWS
CHHHHHHHCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
DTLRGQIADWLPFCDILLLNEVETCGMAGHEDLYTAARTLNRQQPADAACVVKCGPDGAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHH
MWCGERQLQAAAHPIKVVDTIGAGDSFNAGFLSACLHGHSAAVALRWGIRAASHAISSSP
ECCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCC
RQYLDWNTLKTCAGEMV
HHHHCCHHHHHHHCCCC
>Mature Secondary Structure
MMSTNTRPTLYVVGNINVDVIMSTLQQWPQKGTEAMLDHSELRPGGSAGNCALALAALET
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHEEEEHHCC
PYRLVANQGNDYFSPWLAQLFPESSLYWPTYSCETSLTFGVTHPDNERTFFSNQGHITRL
CHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCEEEE
SQDDVLHQIPLFAGNGDTILLCGTFLCTTLLAEYPALLQTLRQRGYRIAVDTGWPPQGWS
CHHHHHHHCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
DTLRGQIADWLPFCDILLLNEVETCGMAGHEDLYTAARTLNRQQPADAACVVKCGPDGAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHH
MWCGERQLQAAAHPIKVVDTIGAGDSFNAGFLSACLHGHSAAVALRWGIRAASHAISSSP
ECCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCC
RQYLDWNTLKTCAGEMV
HHHHCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA