| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ydjH [C]
Identifier: 157370534
GI number: 157370534
Start: 2497197
End: 2498150
Strand: Reverse
Name: ydjH [C]
Synonym: Spro_2294
Alternate gene names: 157370534
Gene position: 2498150-2497197 (Counterclockwise)
Preceding gene: 157370535
Following gene: 157370533
Centisome position: 45.85
GC content: 61.95
Gene sequence:
>954_bases ATGATGAGCACCAATACCCGGCCCACGCTGTACGTGGTGGGCAATATCAACGTCGATGTGATCATGAGCACCTTGCAGCA GTGGCCGCAAAAAGGCACCGAGGCGATGCTGGATCACAGCGAACTGCGCCCCGGCGGTTCGGCCGGTAACTGCGCACTGG CCCTGGCGGCGCTGGAAACCCCTTACCGGCTGGTGGCCAATCAGGGCAACGACTATTTCAGCCCCTGGCTGGCGCAACTG TTCCCGGAAAGCTCGCTGTACTGGCCGACCTACAGTTGCGAAACCTCGCTGACCTTCGGTGTCACCCACCCCGACAACGA GCGCACCTTTTTCAGCAATCAGGGCCATATCACCCGCCTGAGTCAGGACGACGTATTGCATCAGATCCCGCTGTTTGCCG GTAATGGCGACACCATTTTGCTGTGCGGCACCTTCCTGTGTACCACCCTGTTGGCGGAATACCCGGCGCTGCTGCAAACC CTGCGCCAGCGCGGCTATCGCATCGCGGTTGATACCGGCTGGCCGCCGCAGGGCTGGAGCGATACGCTGCGGGGGCAGAT CGCCGACTGGCTGCCGTTCTGCGACATCCTGTTGCTCAATGAAGTGGAAACCTGTGGCATGGCAGGTCATGAAGATTTGT ACACCGCCGCCCGGACGCTGAACCGGCAACAGCCAGCAGATGCCGCCTGCGTGGTGAAATGCGGCCCGGACGGCGCACGT ATGTGGTGTGGCGAACGGCAGCTGCAGGCGGCGGCACATCCGATCAAGGTGGTCGATACCATAGGTGCCGGCGACAGTTT TAACGCCGGTTTCCTGAGCGCTTGCCTGCACGGCCATTCGGCTGCGGTAGCGCTGCGTTGGGGCATTCGCGCCGCCAGCC ACGCCATCAGCAGTTCGCCACGTCAGTATCTGGACTGGAACACGCTGAAAACCTGCGCCGGAGAAATGGTCTGA
Upstream 100 bases:
>100_bases GCCATTCCACCTCTTTTTATTGCCATCTGGCTGCAAAAAACGCTGGTTAGCGGCTTAACCAGCGGTGGCAGCAAAGGCTA ATTTACTCAGGGAAATTAAC
Downstream 100 bases:
>100_bases TGGCAAGTGTCGAACTGGTAAAAGTCGCCAAATACTATGGCAAGCAGCGGGTGCTGAATCCGTTGGATCTGACCATCCCC GACGGCAGCTTTACCGTGCT
Product: ribokinase-like domain-containing protein
Products: NA
Alternate protein names: Carbohydrate Kinase; Ribokinase-Like Domain-Containing Protein; Sugar Kinase Protein; Ribokinase; Argininosuccinate Lyase; Sugar Kinase; Kinase; Ribokinase Family Sugar Kinase; PfkB Domain-Containing Protein; 2-Dehydro-3-Deoxygluconokinase; ATP-Dependent Phosphofructokinase
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MMSTNTRPTLYVVGNINVDVIMSTLQQWPQKGTEAMLDHSELRPGGSAGNCALALAALETPYRLVANQGNDYFSPWLAQL FPESSLYWPTYSCETSLTFGVTHPDNERTFFSNQGHITRLSQDDVLHQIPLFAGNGDTILLCGTFLCTTLLAEYPALLQT LRQRGYRIAVDTGWPPQGWSDTLRGQIADWLPFCDILLLNEVETCGMAGHEDLYTAARTLNRQQPADAACVVKCGPDGAR MWCGERQLQAAAHPIKVVDTIGAGDSFNAGFLSACLHGHSAAVALRWGIRAASHAISSSPRQYLDWNTLKTCAGEMV
Sequences:
>Translated_317_residues MMSTNTRPTLYVVGNINVDVIMSTLQQWPQKGTEAMLDHSELRPGGSAGNCALALAALETPYRLVANQGNDYFSPWLAQL FPESSLYWPTYSCETSLTFGVTHPDNERTFFSNQGHITRLSQDDVLHQIPLFAGNGDTILLCGTFLCTTLLAEYPALLQT LRQRGYRIAVDTGWPPQGWSDTLRGQIADWLPFCDILLLNEVETCGMAGHEDLYTAARTLNRQQPADAACVVKCGPDGAR MWCGERQLQAAAHPIKVVDTIGAGDSFNAGFLSACLHGHSAAVALRWGIRAASHAISSSPRQYLDWNTLKTCAGEMV >Mature_317_residues MMSTNTRPTLYVVGNINVDVIMSTLQQWPQKGTEAMLDHSELRPGGSAGNCALALAALETPYRLVANQGNDYFSPWLAQL FPESSLYWPTYSCETSLTFGVTHPDNERTFFSNQGHITRLSQDDVLHQIPLFAGNGDTILLCGTFLCTTLLAEYPALLQT LRQRGYRIAVDTGWPPQGWSDTLRGQIADWLPFCDILLLNEVETCGMAGHEDLYTAARTLNRQQPADAACVVKCGPDGAR MWCGERQLQAAAHPIKVVDTIGAGDSFNAGFLSACLHGHSAAVALRWGIRAASHAISSSPRQYLDWNTLKTCAGEMV
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081971, Length=276, Percent_Identity=27.1739130434783, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34682; Mature: 34682
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSTNTRPTLYVVGNINVDVIMSTLQQWPQKGTEAMLDHSELRPGGSAGNCALALAALET CCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHEEEEHHCC PYRLVANQGNDYFSPWLAQLFPESSLYWPTYSCETSLTFGVTHPDNERTFFSNQGHITRL CHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCEEEE SQDDVLHQIPLFAGNGDTILLCGTFLCTTLLAEYPALLQTLRQRGYRIAVDTGWPPQGWS CHHHHHHHCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC DTLRGQIADWLPFCDILLLNEVETCGMAGHEDLYTAARTLNRQQPADAACVVKCGPDGAR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHH MWCGERQLQAAAHPIKVVDTIGAGDSFNAGFLSACLHGHSAAVALRWGIRAASHAISSSP ECCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCC RQYLDWNTLKTCAGEMV HHHHCCHHHHHHHCCCC >Mature Secondary Structure MMSTNTRPTLYVVGNINVDVIMSTLQQWPQKGTEAMLDHSELRPGGSAGNCALALAALET CCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHEEEEHHCC PYRLVANQGNDYFSPWLAQLFPESSLYWPTYSCETSLTFGVTHPDNERTFFSNQGHITRL CHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCEEEE SQDDVLHQIPLFAGNGDTILLCGTFLCTTLLAEYPALLQTLRQRGYRIAVDTGWPPQGWS CHHHHHHHCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC DTLRGQIADWLPFCDILLLNEVETCGMAGHEDLYTAARTLNRQQPADAACVVKCGPDGAR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHH MWCGERQLQAAAHPIKVVDTIGAGDSFNAGFLSACLHGHSAAVALRWGIRAASHAISSSP ECCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCC RQYLDWNTLKTCAGEMV HHHHCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA